New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3577225 =	42 (0.760)	3 (0.060)	3/244	NT	6.7%	coding (611/792 nt)	PP_3157	inositol monophosphatase family protein
	?	NC_002947	3577279 =	44 (0.830)					coding (665/792 nt)	PP_3157	inositol monophosphatase family protein

CGCCACACTGATGTGCACCACGCCGGACATGTTCGACACCGCCGAGCGCAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCAT  >  NC_002947/3577079‑3577370                                                                                                                                                    |                                                                                                                                                  caggagcgaagaacccggatcacatggcgtggcgcaacatctccagcacctgcgcatgcagcacagggtcaccacaggccaccacacacccgccatcctgcgccgaactgccatcccacgccgtgatcacgccacccgccccttcgat                                                                                                                                                   <  7:162651‑M1/1‑1 (MQ=255)  gccACACTGATGTGCACCACGCCGGACATGTTCGACACCGCCGAGCGCAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATCCCTTATGGCGGTGATTGCTATGACTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTAAt                                                                                                                                                >  4:313419/1‑149 (MQ=255)  aggagcgaagaacccggatcacatggcgtggcgcaacatctccagcacctgcgcatgcagcacagggtcaccacaggccaccacacacccgccatcctgcgccgaactgccatcccacgccgtgatcacgccacccgccccttcgatga                                                                                                                                                 <  6:321155‑M1/3‑1 (MQ=255)   ggagcgaagaacccggatcacatggcgtggcgcaacatctccagcacctgcgcatgcagcacagggtcaccacaggccaccacacacccgccatcctgcgccgaactgccatcccacgccgtgatcacgccacccgccccttcgatgat                                                                                                                                                >  3:107762‑M1/146‑149 (MQ=255)    gagcgaagtacccgtatcacatggcgtggcgcaacatctccagcagctgcgcatgcagcacagggtcaccacaggcgaccacacacccgccatcctgcgccgaactgccatcccacgccgtgatcacgccacccgccccttctaTGAtc                                                                                                                                               >  8:320170‑M1/145‑149 (MQ=255)      gcgaagaacccggatcacatggcgtggcgcaacatctccagcacctgcgcatgcagcacagggtcaccacaggccaccacacacccgccatcctgcgccgaactgccatcccacgccgtgatcacgccacccgccccttcgaTGAtcg                                                                                                                                              >  7:81801‑M1/143‑148 (MQ=255)      gcgaagaacccggatcacatggcgtggcgcaacatctccagcacctgcgcatgcagcacagggtcaccacaggccaccacacacccgccatcctgcgccgaactgccatcccacgccgtgatcacgccacccgccccttcgaTGAtcg                                                                                                                                              <  8:81801‑M1/6‑1 (MQ=255)      cacTGATGTGCACCACGCCGGACATGTTCGACACCGCCGAGCGCAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGAtcgtc                                                                                                                                            <  1:313564/149‑1 (MQ=255)          gATGTGCACCACGCCGGACATGTTCGACACCGCCGAGCGCAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAg                                                                                                                                        >  2:281162/1‑149 (MQ=255)                caccacGCCGGACATGTTCGACACCGCCGAGCGCAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGc                                                                                                                                   <  8:26701/148‑1 (MQ=255)                    acGCCGGACATGTTCGACACCGCCGAGCGCAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCa                                                                                                                              <  7:215296/149‑1 (MQ=255)                                  cGACACCGCCGAGCGCAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGTCTTCAGCCGTATGACGTa                                                                                                                 >  4:211159/1‑148 (MQ=255)                                    acacCGCCGAGCGCAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGAtcgt                                                                                                                                             >  8:2470/1‑118 (MQ=255)                                    acacCGCCGAGCGCAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGAtcgt                                                                                                                                             <  7:2470/118‑1 (MQ=255)                                    acacCGCCGAGCGCAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAg                                                                                                              >  5:56127/1‑149 (MQ=255)                                     cacCGCCGAGCGCAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGACCCTTCAGCCGTATGACGTACAgg                                                                                                             >  6:93138/1‑149 (MQ=255)                                                gcAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGcc                                                                                                   >  7:104251/1‑148 (MQ=255)                                                gcAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGcc                                                                                                   >  3:137047/1‑148 (MQ=255)                                                         cATTCGAAGCGGTCGCCGGCTATGCGCGGTTGATGCGTTATGGCGGTGTTTGCTATGCCTACTGCATGCTGGCCTCGGTCT‑TTGTCGACGTGATGGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCTCTGATGCCGATCATCGaa                                                                                         <  3:313419/149‑1 (MQ=255)                                                           cagcacagggtcaccacaggccaccacacacccgccatcctgcgccgaactgccatcccacgccgtgatcacgccacccgccccttcgaTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAg                                                                                        >  5:159630‑M1/90‑149 (MQ=255)                                                              gAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGc                                                                                    >  6:177802/1‑149 (MQ=255)                                                                   ggTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTg                                                                               <  7:31510/149‑1 (MQ=255)                                                                         cGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGa                                                                         <  1:281162/149‑1 (MQ=255)                                                                           gCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGAt                                                                        >  8:15143/1‑148 (MQ=255)                                                                            cAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATCCTGGCCTCGCGCTATGGACGACCTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGAt                                                                        >  1:285974/1‑148 (MQ=255)                                                                              aGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACg                                                                    <  7:15143/149‑1 (MQ=255)                                                                                    ggTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTgg                                                              <  8:104251/149‑1 (MQ=255)                                                                                    acacacccgccatcctgcgccgaactgccatcccacgccgtgatcacgccacccgccccttcgaTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCg                                                                                           >  4:166349‑M1/65‑121 (MQ=255)                                                                                    acacacccgccatcctgcgccgaactgccatcccacgccgtgatcacgccacccgccccttcgaTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCg                                                                                           <  3:166349‑M1/57‑1 (MQ=255)                                                                                          tGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGAGGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATgg                                                         <  1:143107/148‑1 (MQ=255)                                                                                          tGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATgg                                                         >  3:111354/1‑148 (MQ=255)                                                                                            cGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAg                                                      >  2:217107/1‑149 (MQ=255)                                                                                              ttATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGtt                                                    <  1:217107/149‑1 (MQ=255)                                                                                                   gCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGgc                                                <  4:137047/148‑1 (MQ=255)                                                                                                         aTTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGAt                                         <  4:111354/149‑1 (MQ=255)                                                                                                             cTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGAGGGCg                                     >  8:162651/1‑149 (MQ=255)                                                                                                                tGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGTCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCgg                                    <  3:211159/147‑1 (MQ=255)                                                                                                                      cTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTgtgg                            <  5:4300/149‑1 (MQ=255)                                                                                                                         cATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTgtggtg                          <  5:177802/148‑1 (MQ=255)                                                                                                                         cATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGtggtgg                         >  6:322139/1‑149 (MQ=255)                                                                                                                                  cTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATgg                                                         >  8:274798/1‑108 (MQ=255)                                                                                                                                  cTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATgg                                                         <  7:274798/108‑1 (MQ=255)                                                                                                                                  cTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGgtgtg                               >  3:13348/1‑134 (MQ=255)                                                                                                                                  cTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGgtgtg                               <  4:13348/134‑1 (MQ=255)                                                                                                                                  cTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTgtggt                 >  3:300661/1‑148 (MQ=255)                                                                                                                                         t‑ttGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCtgt         >  2:198415/1‑149 (MQ=255)                                                                                                                                         t‑ttGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCtgt         >  8:155037/1‑149 (MQ=255)                                                                                                                                            tGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGtgc       >  5:363434/1‑149 (MQ=255)                                                                                                                                              tCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGtgctg     >  5:321155/1‑149 (MQ=255)                                                                                                                                              tCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGtgctg     <  5:322139/149‑1 (MQ=255)                                                                                                                                              tCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGtgct      <  6:363434/148‑1 (MQ=255)                                                                                                                                              tCGAAGTGATGGTGGAAGCGATCCTTGTGCCGTATGACGTTGTCGTGGTGTTGCCGATCATCGAAGGGGCGGGGGGCGTGATCACGGCGTGGGATGGGTGTTCGGCGGAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGtgctg     <  2:285974/149‑1 (MQ=255)                                                                                                                                                 aCGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCAt  >  6:76947/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                  CGCCACACTGATGTGCACCACGCCGGACATGTTCGACACCGCCGAGCGCAAGGCGGCATTCGAAGCGGTCGCCGGCAAGGCGCGGTTGATGCGTTATGGCGGTGATTGCTATGCCTACTGCATGCTGGCCTCGGGCT‑TTGTCGACGTGATCGTCGAAGCGAGCCTTCAGCCGTATGACGTACAGGCGCTGATGCCGATCATCGAAGGGGCGGGTGGCGTGATCACGGCGTGGGATGGCAGTTCGGCGCAGGATGGCGGGTGTGTGGTGGCCTGTGGTGACCCTGTGCTGCAT  >  NC_002947/3577079‑3577370

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.