New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4579666 | 54 (0.980) | 4 (0.080) | 4/246 | NT | 6.7% | coding (445/2211 nt) | glgB | 1,4‑alpha‑glucan branching enzyme |
? | NC_002947 | = 4579721 | 60 (1.130) | coding (390/2211 nt) | glgB | 1,4‑alpha‑glucan branching enzyme |
GAGTACTTCGAACTTGTAGGTTTCGCCCACGCCCAGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCG > NC_002947/4579520‑4579814 | gAGTACTTCGAACTTGTAGGTTTCGCCCACGCCCAGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGgcg > 6:32802/1‑149 (MQ=255) tACTTCGAACTTGTAGGTTTCGCCCACGCCCAGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGcc > 6:304822/1‑148 (MQ=255) ctCGAACTTGTAGGTTTCGCCCACGCCCAGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGa > 6:134718/2‑149 (MQ=255) cTTGTAGGTTTCGCCCACGCCCAGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCgaga < 8:216684/149‑1 (MQ=255) gTAGGTTTCGCCCACGCCCAGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGaaa > 2:197054/1‑148 (MQ=255) gTAGGTTTCGCCCACGCCCAGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGaaa > 2:202680/1‑148 (MQ=255) ggTTTCGCCCACGCCCAGACGCGGAATGAACAGCTCCCACACACCCGCAACGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCAGGGCATTCGGCGCCCAGAACGAGAAacaca > 7:143092/1‑149 (MQ=255) gTTTCGCCCACGCCCAGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGtgcccagccgactcaggtcga > 4:25591‑M1/1‑128 (MQ=255) gTTTCGCCCACGCCCAGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAacacac < 7:27856/149‑1 (MQ=255) gTTTCGCCCACGCCCAGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAacacac < 5:134718/149‑1 (MQ=255) gcccacgcccaGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGt > 1:233323/1‑149 (MQ=255) ccacgcccaGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTc > 7:184195/1‑148 (MQ=255) ccacgcccaGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTc > 5:292548/1‑148 (MQ=255) ccacgcccaGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTc > 2:47724/1‑148 (MQ=255) cacgcccaGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGa > 1:350127/1‑149 (MQ=255) acgcccaGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGAt < 7:33280/149‑1 (MQ=255) ccaGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCCCCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCa > 7:69466/1‑149 (MQ=255) aCGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGa > 4:47062/1‑149 (MQ=255) cgcgGAATGACCAGCTCACACACCCCCGCCCCGTGGCGCAGGCGCATGGGGGGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCTGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGAc < 2:350127/149‑1 (MQ=255) cgGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCt < 6:292548/149‑1 (MQ=255) gAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGa < 1:182976/149‑1 (MQ=255) aaTGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAg > 5:14427/1‑149 (MQ=255) aGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCTTTCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTg < 8:181019/149‑1 (MQ=255) aGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTg < 3:47062/149‑1 (MQ=255) ccACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGtgcccagccgactcaggtcgatggcatcgacggcgtgtgtttctcggtctgggcgc > 7:88654‑M1/1‑93 (MQ=255) acCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGtgcccagccgactcaggtcgatggcatcgacggcgtgtgtttctcggtctgggcgccgaa < 8:88654‑M1/149‑61 (MQ=255) cccccGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGtgcccagccgactcaggtcgatggcatcgacggcgtgtgtttctcggtctgggcgccgaat < 3:25591‑M1/149‑62 (MQ=255) cctcACCGTGGCTCAGGCGCATGTGGTGACGTCGACCATCCCAGTTGTAGAAATCACCCACCACCGACACTCTCCGTTCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAgcgc < 8:143092/146‑1 (MQ=255) ggcgcaTGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCgg < 6:14427/149‑1 (MQ=255) gcaTGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGa < 5:32802/149‑1 (MQ=255) caTGGGGTGACGGCGACCATCCCAGTTGTTTAAATCACCCACCACCGACACTCTCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGAt < 8:184195/149‑1 (MQ=255) ggTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCt > 6:15315/1‑149 (MQ=255) ggCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCgg > 1:234756/1‑134 (MQ=255) ggCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCgg < 2:234756/134‑1 (MQ=255) ggCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCcgcg < 2:233323/149‑1 (MQ=255) cATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAg < 5:304822/149‑1 (MQ=255) aTCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGt > 2:217859/1‑149 (MQ=255) tCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCgg < 5:66354/126‑1 (MQ=255) tCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCgg > 6:66354/1‑126 (MQ=255) aGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAgg > 7:82029/1‑149 (MQ=255) ttgAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCAt > 5:289328/1‑149 (MQ=255) ttgAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCAt < 1:47724/149‑1 (MQ=255) tgAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCAt < 5:15315/148‑1 (MQ=255) aaaTCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGtc > 6:38082/1‑149 (MQ=255) aaaTCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGtc > 4:348221/1‑149 (MQ=255) tCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTcc < 3:348221/149‑1 (MQ=255) cccaccACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCaa > 6:261092/1‑149 (MQ=255) ccaccaCCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTgg < 6:368418/80‑1 (MQ=255) ccaccaCCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTgg > 5:368418/1‑80 (MQ=255) ccaccaCCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAAt > 6:338033/1‑149 (MQ=255) accaccGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTg > 5:91834/1‑149 (MQ=255) accGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTGCgg > 5:68278/1‑149 (MQ=255) accGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTGCgg < 5:261092/149‑1 (MQ=255) cGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGc > 5:260744/1‑149 (MQ=255) acTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGCCGaa < 6:289328/149‑1 (MQ=255) cTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAg > 6:98543/1‑149 (MQ=255) tCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAgg > 6:89398/1‑121 (MQ=255) tCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAgg < 5:89398/121‑1 (MQ=255) tCGCCGGCCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCCGCTGGGCACCCAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATAGCGGGCCGAAGc > 2:111376/1‑149 (MQ=255) gCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAggg < 6:68278/149‑1 (MQ=255) aTTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCAccgaatgcccggcgagtgtcggtggtgggtgatttcaacaactgggatggtcgccgtcaccccatgcgcctgcgccacggtgcggggg < 3:25591‑M2/149‑89 (MQ=255) ttCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCAccgaatgcccggcgagtgtcggtggtgggtgatttcaacaactgggatggtcgccgtcaccccatgcgcctgcgccacggtgcgggggt < 8:88654‑M2/149‑90 (MQ=255) ggCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCtt < 5:38082/148‑1 (MQ=255) gcgcCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCAccgaatgcccggcgagtgtcggtggtgggtgatttcaacaactgggatggtcgccgtcaccccatgcgcctgcgccacggtgcgggggtgtgg > 7:88654‑M2/1‑56 (MQ=255) | GAGTACTTCGAACTTGTAGGTTTCGCCCACGCCCAGACGCGGAATGAACAGCTCCCACACCCCCGCACCGTGGCGCAGGCGCATGGGGTGACGGCGACCATCCCAGTTGTTGAAATCACCCACCACCGACACTCGCCGGGCATTCGGCGCCCAGACCGAGAAACACACGCCGTCGATGCCATCGACCTGAGTCGGCTGGGCACCGAAGCGCCCGGACAAATCGCGGTGATTGCCTTCCGCGAACAAGTGAAGGTCCATGTCTCCCAATTGCGGGCCGAAGCTGTAGGGGTCTTCG > NC_002947/4579520‑4579814 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |