New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5297700 | 57 (1.030) | 5 (0.090) | 5/244 | NT | 8.3% | coding (226/567 nt) | PP_4671 | hypothetical protein |
? | NC_002947 | = 5297712 | 56 (1.060) | coding (214/567 nt) | PP_4671 | hypothetical protein |
GAACAGCCGATCGCGCTGGCCCTGGTCAAGCTTGCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTGGGCGGCGGTTGTGCCGGGGTCTGCCCGGG > NC_002947/5297554‑5297846 | gAACAGCCGATCGCGCTGGCCCTGGTCAAGCTTGCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGTCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGt < 3:163278/149‑1 (MQ=255) ccGATCGCGCTGGCCCTGGTCAAGCTTGCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACtcg > 6:259807/1‑148 (MQ=255) gCCCTGGTCAAGCTTGCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCa < 3:17112/149‑1 (MQ=255) tCAAGCTTGCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGgc < 7:302627‑M2/136‑3 (MQ=255) tCAAGCTTGCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGgc > 8:302627‑M2/1‑134 (MQ=255) gCTTGCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGCTCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCg > 6:334564/1‑148 (MQ=255) gCTTGCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCccgaccgagtacgccgacgatctcatcaagg < 6:314283‑M1/149‑32 (MQ=255) gCTTGCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCg > 6:64183/1‑148 (MQ=255) ttGCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGACACAGGCGTa > 3:126644/1‑148 (MQ=255) gCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTaaa < 7:333005/148‑1 (MQ=255) gCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAg > 8:320373/1‑149 (MQ=255) gCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAg > 2:122118/1‑149 (MQ=255) aaTGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAg > 3:206652/1‑146 (MQ=255) tGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGaa < 8:258848/149‑1 (MQ=255) agagGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGt > 2:50785/1‑149 (MQ=255) gagGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGg > 6:95997‑M2/1‑117 (MQ=255) gagGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGtt < 5:259807/149‑1 (MQ=255) gagGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGt < 1:122118/148‑1 (MQ=255) ggCATCGAACGCCTGGGCGACCTGGGTGTCTTCTGCCAGCCTGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTCGACATGGCCCTTGATGACATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACACGCGTAAAGGAGAAGGTACGa > 2:190546/1‑149 (MQ=255) cATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCccgaccgagtacgccgacga < 5:108710‑M1/120‑21 (MQ=255) cATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCccgaccgagtacgccgacga > 6:108710‑M1/1‑100 (MQ=255) cATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGca < 2:185773/124‑1 (MQ=255) cATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGca > 1:185773/1‑124 (MQ=255) aTCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACgg > 8:326876/1‑149 (MQ=255) gCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGc < 1:50785/148‑1 (MQ=255) gCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGc < 4:316428/121‑1 (MQ=255) gCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGc > 3:316428/1‑121 (MQ=255) gCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCg > 1:346872/1‑149 (MQ=255) cGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTaa < 1:95730/149‑1 (MQ=255) cTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGc > 2:69102/1‑104 (MQ=255) cTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGc < 1:69102/104‑1 (MQ=255) cTGGGTGTCTTCTGCCACGAGGCGGCGCAACAGCATCGGCCGGCCGGCTACACACCTGGACATGGCCCTTGTTGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTaa < 1:115530/149‑1 (MQ=255) ggTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCa < 3:250811/132‑1 (MQ=255) ggTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCa > 4:250811/1‑132 (MQ=255) ggTGTCTTCTGCCAGCAGGCGCCGCAACTGCAGCGGCCGGGCGG‑‑‑‑ACTCCTTGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGaaa < 4:206652/148‑1 (MQ=255) tgtCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCTTACTCGTTCGGGCCGACCAGGCACAGGCGTAAAGGAGTAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATa < 1:190546/149‑1 (MQ=255) tgtCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATa > 2:6260/1‑149 (MQ=255) ttctGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCccgaccgagtacgccgacgatc < 2:59679‑M1/94‑23 (MQ=255) ttctGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCccgaccgagtacgccgacgatc > 1:59679‑M1/1‑72 (MQ=255) ttctGCCAGCAGGCGCCGCACCTCCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCCGAGTACTCGCTCCGGCCCACCAGGCACAGGCGTAAAGGAGAAGCTTCCACGCGCCAGCGGGCGAAACTGAAAATAccc > 3:318704/1‑148 (MQ=255) ctGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAg < 5:64183/148‑1 (MQ=255) ccAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGt < 6:230966/129‑1 (MQ=255) ccAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGt > 5:230966/1‑129 (MQ=255) ccAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGtact < 5:176584/149‑1 (MQ=255) ccAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGtac > 6:176584/1‑148 (MQ=255) ccAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTCAAAATACCCAGtac > 7:153856/1‑148 (MQ=255) gCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTg < 7:320373/149‑1 (MQ=255) cAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTgg > 6:41723/1‑149 (MQ=255) aGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGgc > 2:100263/1‑149 (MQ=255) gccggccgG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGACACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGgcgcgc < 4:126644/149‑1 (MQ=255) ccggccgg‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCgct < 5:41723/149‑1 (MQ=255) cggccgg‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGgc < 6:97569/143‑1 (MQ=255) cggccgg‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGgc > 5:97569/1‑143 (MQ=255) tCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTg > 3:267113/1‑149 (MQ=255) cTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTggg > 3:326207/1‑149 (MQ=255) cTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTgg < 7:326876/148‑1 (MQ=255) cTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTgg < 4:267113/148‑1 (MQ=255) gACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTGggcgg > 4:247365/1‑149 (MQ=255) cATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTGGgcggcg < 3:247365/149‑1 (MQ=255) cATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTGGgcggcg < 2:346872/149‑1 (MQ=255) aTGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTGGGcggcgg > 1:214111/1‑149 (MQ=255) ggCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTGGGCGGCGGtt > 5:245123/1‑149 (MQ=255) ccTTGATGAGATCGTCGGCGTACTCGGTCGGgccgacgatctcatcaagggccatgtccaggagtccggccggccgctgcaggtgcggcgcctgctggcagaagacacccaggtcgcccaggcctgcgatgccctctacattggcaagc < 6:314283‑M2/149‑119 (MQ=255) agaTCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTGGGCGGCGGTTGTGCCGGGGTc < 1:100263/149‑1 (MQ=255) gaTCGTCGGCGTACTCGGTCGGgccgacgatctcatcaagggccatgtccaggagtccggccggccgctgcaggtgcggcgcctgctggcagaa > 1:59679‑M2/1‑22 (MQ=255) gaTCGTCGGCGTACTCGGTCGGgccgacgatctcatcaagggccatgtccaggagtccggccggccgctgcaggtgcggcgcctgctggcagaa < 2:59679‑M2/94‑73 (MQ=255) gaTCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTGGGCGGCGGTTGTGCCGGGGTCt > 3:129304/1‑149 (MQ=255) aTCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTggg > 2:188169/1‑98 (MQ=255) aTCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTggg < 1:188169/98‑1 (MQ=255) tcgtcgGCGTACTCGGTCGGgccgacgatctcatcaagggccatgtccaggagtccggccggccgctgcaggtgcggcgcctgctggcagaagacacccaggtcgcccaggcctgcgatg > 6:108710‑M2/1‑20 (MQ=255) tcgtcgGCGTACTCGGTCGGgccgacgatctcatcaagggccatgtccaggagtccggccggccgctgcaggtgcggcgcctgctggcagaagacacccaggtcgcccaggcctgcgatg < 5:108710‑M2/120‑101 (MQ=255) tcgGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTGGGCGGCGGTTGTGCCGGGGTCTGCCCg < 5:334564/149‑1 (MQ=255) ggCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTGGGCGGCGGTTGTGCCGGGGTCTGCCCggg < 1:6260/149‑1 (MQ=255) gCccgaccgagtacgccgacgatctcatcaagggccatgtccaggagtccggccggccgctgcaggtgcggcgcctgctggcagaagacacccaggtcgcccaggcctgcgatgccctctacattggcaagcttga < 7:302627‑M1/136‑135 (MQ=255) gCccgaccgagtacgccgacgatctcatcaagggccatgtccaggagtccggccggccgctgcaggtgcggcgcctgctggcagaagacacccaggtcgcccaggcctgcgatgccctctacattggcaagcttga > 8:302627‑M1/1‑2 (MQ=255) gCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTGGGCGGCGGTTGTGCCGGGGTCTGCCCggg > 3:347336/1‑148 (MQ=255) cccgaccgagtacgccgacgatctcatcaagggccatgtccaggagtccggccggccgctgcaggtgcggcgcctgctggcagaagacacccaggtcgcccaggcctgcgatgccctc > 6:95997‑M1/1‑1 (MQ=255) | GAACAGCCGATCGCGCTGGCCCTGGTCAAGCTTGCCAATGTAGAGGGCATCGCAGGCCTGGGCGACCTGGGTGTCTTCTGCCAGCAGGCGCCGCACCTGCAGCGGCCGGCCGG‑‑‑‑ACTCCTGGACATGGCCCTTGATGAGATCGTCGGCGTACTCGGTCGGGCCGACCAGGCACAGGCGTAAAGGAGAAGGTTCGACGGGCCAGCGGGCGTAACTGAAAATACCCAGTACTACCTGGGTGACTGCCTTGGCGCGCTGCTGTGCCTGGGCGGCGGTTGTGCCGGGGTCTGCCCGGG > NC_002947/5297554‑5297846 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |