New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 126143 = | 51 (0.920) | 4 (0.080) | 4/244 | NT | 8.1% | coding (948/951 nt) | thrB | homoserine kinase |
? | NC_002947 | 126182 = | 42 (0.800) | coding (909/951 nt) | thrB | homoserine kinase |
GAGCGCTTGCTGGAGAAGCTGGGCGGTGACCTGGCAGGCTGCCTGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCGGCCACAGCTCGGCTTCGGCTGCAGT > NC_002947/126034‑126325 | gAGCGCTTGCTGGAGAAGCTGGGCGGTGACCTGGCAGGCTGCCTGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTgc > 5:190988/1‑149 (MQ=255) cgggtaggctgcgtgcgtttctggctgtcgcgcctgattgcggccgagtcgttcgccgggatggatgtgatgatccacgatccgagcgagttcgaagtgcgtctggcgCAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTgcg > 6:48514‑M1/109‑149 (MQ=255) gggtaggctgcgtgcgtttctggctgtcgcgcctgattgcggccgagtcgttcgccgggatggatgtgatgatccacgatccgagcgagttcgaagtgcgtctggcgCAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTgc > 5:118783‑M1/108‑147 (MQ=255) gggtaggctgcgtgcgtttctggctgtcgcgcctgattgcggccgagtcgttcgccgggatggatgtgatgatccacgatccgagcgagttcgaagtgcgtctggcgCAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTgc < 6:118783‑M1/40‑1 (MQ=255) gCTGGAGAAGCTGGGCGGTGACCTGGCAGGCTGCCTGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGa < 3:185293/147‑1 (MQ=255) gagaAGCTGGGCGGTGACCTGGCAGGCTGCCTGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGGCGCACt > 7:117622/1‑149 (MQ=255) gaAGCTGGGCGGTGACCTGGCAGGCTGCCTGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTc < 3:69237/149‑1 (MQ=255) gCTGGGCGGTGACCTGGCAGGCTGCCTGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGaa < 3:166114/149‑1 (MQ=255) gggCGGTGACCTGGCAGGCTGCCTGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAActc > 5:352753/1‑149 (MQ=255) gCAGGCTGCCTGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGt < 1:201101/147‑1 (MQ=255) gCAGGCTGCCTGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTg < 5:126159/148‑1 (MQ=255) cTGCCTGGAGCAGTTGTAAGCCTGTGCGTGCCTCTTGGCGGGCTCGCCCGTGAAGAAGCATTCGGTGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGatcat < 8:237759/149‑1 (MQ=255) gCCTGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGatcatc < 8:117622/148‑1 (MQ=255) ccTGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGatcatc < 2:227004/147‑1 (MQ=255) tGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGAGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATcac < 5:112868/147‑1 (MQ=255) tGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGAGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATcac > 6:112868/1‑147 (MQ=255) tAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGc > 5:234137/1‑148 (MQ=255) gCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCATACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAAc > 5:168555/1‑149 (MQ=255) ccGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCATACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCg < 6:168555/148‑1 (MQ=255) ccGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCgg < 6:352753/149‑1 (MQ=255) cccTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGc > 2:338638/1‑148 (MQ=255) cccTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGc > 8:119529/1‑148 (MQ=255) cTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAAt < 6:234137/149‑1 (MQ=255) ttCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAAt > 1:187742/1‑148 (MQ=255) ttCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAAt > 1:195820/1‑148 (MQ=255) gCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGt > 3:148296/1‑101 (MQ=255) gCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGt < 4:148296/101‑1 (MQ=255) ccGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGc > 1:8145/1‑148 (MQ=255) ccGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGc > 4:129723/1‑148 (MQ=255) ccGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGc > 4:134937/1‑148 (MQ=255) ccGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGc > 4:72203/1‑148 (MQ=255) agCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGcc > 4:138825/1‑121 (MQ=255) agCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGcc < 3:138825/121‑1 (MQ=255) gCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTg > 6:53998/1‑86 (MQ=255) gCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTg < 5:53998/86‑1 (MQ=255) aGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAacgcacgc > 3:7084/1‑149 (MQ=255) cgcgGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGc < 2:8145/149‑1 (MQ=255) gcgGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGc < 4:243200/132‑1 (MQ=255) cgcagcgccagcaggtggcattgcacctgccgttcgcgctgCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCg > 6:48514‑M2/42‑149 (MQ=255) gcagcgccagcaggtggcattgcacctgccgttcgcgctgCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTAccc > 5:118783‑M2/41‑147 (MQ=255) gcagcgccagcaggtggcattgcacctgccgttcgcgctgCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTAccc < 6:118783‑M2/107‑1 (MQ=255) CAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGCCGCGACAGCCAGAAACGCACGCAGCCTAcc > 1:209605‑M1/1‑146 (MQ=255) AGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCaa > 1:338638‑M1/1‑149 (MQ=255) AGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCaa > 7:119529‑M1/1‑149 (MQ=255) aCGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTcc < 4:7084/149‑1 (MQ=255) cGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCg < 2:195820/149‑1 (MQ=255) ggCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCgg > 3:107509/1‑149 (MQ=255) ggTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCGGCtac < 3:72203/149‑1 (MQ=255) aaTGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCGGCCACAGCtc < 6:190988/149‑1 (MQ=255) aTGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCGGCCACAGCtcg < 2:187742/149‑1 (MQ=255) ccTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGaaa > 2:101279/1‑104 (MQ=255) ccTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGaaa < 1:101279/104‑1 (MQ=255) ccgttcgcgctgCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCGGCCACAGCtcggcttcgg < 5:48514‑M2/137‑1 (MQ=255) tgGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGgc‑gc > 2:81238/1‑87 (MQ=255) tgGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGgc‑gc < 1:81238/87‑1 (MQ=255) gcgctgCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCGGCCACAGCTCGGCTTCGGCTGCa < 3:129723‑M2/142‑1 (MQ=255) gcgctgCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCGGCCACAGCTCGGCTTCGGCTGCa < 3:134937‑M2/142‑1 (MQ=255) gcgctgCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCGGCCACAGCTCGGCTTCGGCTGCAg > 2:163166‑M2/7‑149 (MQ=255) gctgCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCGGCCACAGCTCGGCTTCGGCTGCAGt > 8:272897‑M2/5‑148 (MQ=255) gctgCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCGGCCACAGCTCGGCTTCGGCTGCAGt > 1:350620‑M2/5‑148 (MQ=255) gcagCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCGGCCACAGCTCGGCTTCGGCTGCAGt > 2:21099‑M2/5‑148 (MQ=255) | GAGCGCTTGCTGGAGAAGCTGGGCGGTGACCTGGCAGGCTGCCTGGAGCAGTTGTAAGCCTGTGCCGGCCCCTTCGCGGGCACGCCCGCGAAGAAGCAGACGCGGTCTACAGCGCGAACGGCAGGTGCAATGCCACCTGCTGGCGCTGCGCCAGACGCACTTCGAACTCGCTCGGATCGTGGATCATCACATCCATCCCGGCGAACGACTCGGCCGCAATCAGGC‑GCGACAGCCAGAAACGCACGCAGCCTACCCGCAACATTTCCGGCCACAGCTCGGCTTCGGCTGCAGT > NC_002947/126034‑126325 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |