New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 147891158 (1.050)5 (0.090) 4/244 NT 8.8% intergenic (+170/‑26) PP_1291/moaC PhoH family protein/cyclic pyranopterin monophosphate synthase accessory protein
?NC_002947 = 1478933 49 (0.930)intergenic (+192/‑4) PP_1291/moaC PhoH family protein/cyclic pyranopterin monophosphate synthase accessory protein

CGCCCGTTCACAGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACG  >  NC_002947/1478785‑1479069
                                                                                                                                                    |                                                                                                                                        
cgcCCGTTCACAGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGgagcaga                                                                                                                                          <  3:176454/149‑1 (MQ=255)
   ccGTTCACAGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAg                                                                                                                                         <  5:267522‑M2/147‑2 (MQ=255)
         acaGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCt                                                                                                                                  >  4:40712/1‑148 (MQ=255)
         acaGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCt                                                                                                                                  >  3:215541/1‑148 (MQ=255)
           aGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGac                                                                                                                               <  3:25863/149‑1 (MQ=255)
            ggAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGaca                                                                                                                              >  5:250717/1‑149 (MQ=255)
                cTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATc                                                                                                                          <  7:222753/149‑1 (MQ=255)
                        gATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGAtt                                                                                                                    <  2:197164/147‑1 (MQ=255)
                            cGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAg                                                                                                               <  6:267522/148‑1 (MQ=255)
                             gAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAggg                                                                                                             >  7:70644/1‑149 (MQ=255)
                             gAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAgg                                                                                                              <  3:190242/148‑1 (MQ=255)
                               ggCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGgggc                                                                                                           <  5:74002/149‑1 (MQ=255)
                                     ggAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCt                                                                                                                         <  4:130635/129‑1 (MQ=255)
                                     ggAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCt                                                                                                                         >  3:130635/1‑129 (MQ=255)
                                         cTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTCCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTCCTGACACATCTTGATTCCCAGGGGCGTGCCAACAt                                                                                                 >  4:69276/1‑149 (MQ=255)
                                          tcatgtgGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTACCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATg                                                                                                >  1:296921/4‑149 (MQ=255)
                                               tgGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTc                                                                                             <  8:70644/147‑1 (MQ=255)
                                               tgGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTc                                                                                             <  3:40712/147‑1 (MQ=255)
                                                   aGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAAc                                                                                                   >  8:228740/1‑137 (MQ=255)
                                                   aGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAAc                                                                                                   <  7:228740/137‑1 (MQ=255)
                                                   aGCGGGCGTGACCGCGAAGAGGCAAAACCTGCCGACACATACCTCAGCTCAAACCTTACCAACACGATTACACTGCGAACTCCCTTCCCAGGAGCACAGCAGTg                                                                                                                                    >  8:72000/1‑104 (MQ=255)
                                                              ccGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGc                                                                            >  5:192682/1‑149 (MQ=255)
                                                                   aaGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGa                                                                       >  5:29241/1‑149 (MQ=255)
                                                                         ccAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAgc                                                                 <  6:29241/149‑1 (MQ=255)
                                                                                       acaTACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTAccgcc                                                   >  5:234672/1‑149 (MQ=255)
                                                                                        caTACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTAccgccg                                                  <  6:192682/149‑1 (MQ=255)
                                                                                         aTACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTAccgcc                                                   >  4:338989/1‑147 (MQ=255)
                                                                                               ctGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGcgcg                                           >  1:283645/1‑149 (MQ=255)
                                                                                                tGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGATGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGgcgc                                            <  4:215541/147‑1 (MQ=255)
                                                                                                  cTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGt                                        <  3:338989/149‑1 (MQ=255)
                                                                                                    cAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTgc                                      <  4:224827/149‑1 (MQ=255)
                                                                                                     aaaCCTGCCTCACAGGTTTACACTGCGAACTCCCATCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTgcg                                     <  6:250717/149‑1 (MQ=255)
                                                                                                        ccTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCAt                                  >  6:222389/1‑149 (MQ=255)
                                                                                                         cTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATg                                 <  6:234672/149‑1 (MQ=255)
                                                                                                              ccACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGcc                            >  6:26563/1‑149 (MQ=255)
                                                                                                              ccACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGcc                            >  4:293488/1‑149 (MQ=255)
                                                                                                              ccACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGcc                            >  5:127738/1‑149 (MQ=255)
                                                                                                                acaGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGa                                                 >  8:185431/1‑126 (MQ=255)
                                                                                                                acaGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGa                                                 <  7:185431/126‑1 (MQ=255)
                                                                                                                acaGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTgc                                      >  1:40927/1‑137 (MQ=255)
                                                                                                                acaGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTgc                                      <  2:40927/137‑1 (MQ=255)
                                                                                                                    gTTTACACTGCGAACTCCCTTCACAGGAGCAGAgcagtgtaaacctgtgggtcaggtttgagcagaggtatgtgtcggcaggtttggcctcttcgcgggcacgcccgctcccacaggagctccacggcctcgaatcaagtg                              <  4:333404‑M2/141‑109 (MQ=255)
                                                                                                                    gTTTACACTGCGAACTCCCTTCACAGGAGCAGAgcagtgtaaacctgtgggtcaggtttgagcagaggtatgtgtcggcaggtttggcctcttcgcgggcacgcccgctcccacaggagctccacggcctcgaatcaagtg                              >  3:333404‑M2/1‑33 (MQ=255)
                                                                                                                     tttACACTGCGAACTCCCTTCACAGGAGCAGAgcagtgtaaacctgtgggtcaggtttgagcagaggtatgtgtcgggataaattaactcttatcggggtcacgcccgctcccacaggagctccacggcctcgaatcaagtggagttcc                     <  1:116027‑M2/149‑118 (MQ=255)
                                                                                                                     tttACACTGCGAACTCCCTTCACAGGAGCAGAgcagtgtaaacctgtgggtcaggtttgagcagaggtatgtgtcggcaggtttggcctcttcgagggcacgcccgctcccacaggagctccacggcctcgaatcaagtggagttcctg                     <  5:78188‑M2/149‑118 (MQ=255)
                                                                                                                         cacTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTg                  <  5:222389/148‑1 (MQ=255)
                                                                                                                          acTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGa                                                 <  2:175169/116‑1 (MQ=255)
                                                                                                                          acTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTg                  >  6:20487/1‑147 (MQ=255)
                                                                                                                           cTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAg               <  3:293488/149‑1 (MQ=255)
                                                                                                                             gCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAgat             >  3:323884/1‑149 (MQ=255)
                                                                                                                                 aCTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGAtc         >  2:26310/1‑149 (MQ=255)
                                                                                                                                  cTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGAtcg        >  8:176726/1‑149 (MQ=255)
                                                                                                                                      cTTCACAGGAGCAGAgcagtgtaaacctgtgggtcaggtttgagcagaggtatgtgtcggcaggtttggcctcttcgcgggcacgcccgctcccacaggagctccacggcctcgaatcaagtggagttcctgtgaacgggcgcgtccac    >  6:78188‑M2/1‑15 (MQ=255)
                                                                                                                                      cTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCgg                                          >  7:133099/1‑111 (MQ=255)
                                                                                                                                      cTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCgg                                          <  8:133099/111‑1 (MQ=255)
                                                                                                                                      cTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGa    >  4:151334/1‑149 (MQ=255)
                                                                                                                                       ttCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGAc   >  2:205429/1‑149 (MQ=255)
                                                                                                                                         cacaGGACCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAACGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACg  <  2:296921/148‑1 (MQ=255)
                                                                                                                                            aGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACg                                                                                         <  5:189098/58‑1 (MQ=255)
                                                                                                                                            aGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACg                                                                                         >  6:189098/1‑58 (MQ=255)
                                                                                                                                                 cagagcagTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTgcgc                                    <  6:39533/106‑1 (MQ=255)
                                                                                                                                                 cagagcagTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTgcgc                                    >  5:39533/1‑106 (MQ=255)
                                                                                                                                                    |                                                                                                                                        
CGCCCGTTCACAGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACG  >  NC_002947/1478785‑1479069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.