New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1478911 | 58 (1.050) | 5 (0.090) | 4/244 | NT | 8.8% | intergenic (+170/‑26) | PP_1291/moaC | PhoH family protein/cyclic pyranopterin monophosphate synthase accessory protein |
? | NC_002947 | = 1478933 | 49 (0.930) | intergenic (+192/‑4) | PP_1291/moaC | PhoH family protein/cyclic pyranopterin monophosphate synthase accessory protein |
CGCCCGTTCACAGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACG > NC_002947/1478785‑1479069 | cgcCCGTTCACAGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGgagcaga < 3:176454/149‑1 (MQ=255) ccGTTCACAGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAg < 5:267522‑M2/147‑2 (MQ=255) acaGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCt > 4:40712/1‑148 (MQ=255) acaGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCt > 3:215541/1‑148 (MQ=255) aGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGac < 3:25863/149‑1 (MQ=255) ggAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGaca > 5:250717/1‑149 (MQ=255) cTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATc < 7:222753/149‑1 (MQ=255) gATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGAtt < 2:197164/147‑1 (MQ=255) cGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAg < 6:267522/148‑1 (MQ=255) gAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAggg > 7:70644/1‑149 (MQ=255) gAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAgg < 3:190242/148‑1 (MQ=255) ggCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGgggc < 5:74002/149‑1 (MQ=255) ggAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCt < 4:130635/129‑1 (MQ=255) ggAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCt > 3:130635/1‑129 (MQ=255) cTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTCCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTCCTGACACATCTTGATTCCCAGGGGCGTGCCAACAt > 4:69276/1‑149 (MQ=255) tcatgtgGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTACCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATg > 1:296921/4‑149 (MQ=255) tgGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTc < 8:70644/147‑1 (MQ=255) tgGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTc < 3:40712/147‑1 (MQ=255) aGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAAc > 8:228740/1‑137 (MQ=255) aGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAAc < 7:228740/137‑1 (MQ=255) aGCGGGCGTGACCGCGAAGAGGCAAAACCTGCCGACACATACCTCAGCTCAAACCTTACCAACACGATTACACTGCGAACTCCCTTCCCAGGAGCACAGCAGTg > 8:72000/1‑104 (MQ=255) ccGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGc > 5:192682/1‑149 (MQ=255) aaGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGa > 5:29241/1‑149 (MQ=255) ccAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAgc < 6:29241/149‑1 (MQ=255) acaTACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTAccgcc > 5:234672/1‑149 (MQ=255) caTACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTAccgccg < 6:192682/149‑1 (MQ=255) aTACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTAccgcc > 4:338989/1‑147 (MQ=255) ctGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGcgcg > 1:283645/1‑149 (MQ=255) tGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGATGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGgcgc < 4:215541/147‑1 (MQ=255) cTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGt < 3:338989/149‑1 (MQ=255) cAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTgc < 4:224827/149‑1 (MQ=255) aaaCCTGCCTCACAGGTTTACACTGCGAACTCCCATCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTgcg < 6:250717/149‑1 (MQ=255) ccTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCAt > 6:222389/1‑149 (MQ=255) cTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATg < 6:234672/149‑1 (MQ=255) ccACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGcc > 6:26563/1‑149 (MQ=255) ccACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGcc > 4:293488/1‑149 (MQ=255) ccACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGcc > 5:127738/1‑149 (MQ=255) acaGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGa > 8:185431/1‑126 (MQ=255) acaGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGa < 7:185431/126‑1 (MQ=255) acaGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTgc > 1:40927/1‑137 (MQ=255) acaGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTgc < 2:40927/137‑1 (MQ=255) gTTTACACTGCGAACTCCCTTCACAGGAGCAGAgcagtgtaaacctgtgggtcaggtttgagcagaggtatgtgtcggcaggtttggcctcttcgcgggcacgcccgctcccacaggagctccacggcctcgaatcaagtg < 4:333404‑M2/141‑109 (MQ=255) gTTTACACTGCGAACTCCCTTCACAGGAGCAGAgcagtgtaaacctgtgggtcaggtttgagcagaggtatgtgtcggcaggtttggcctcttcgcgggcacgcccgctcccacaggagctccacggcctcgaatcaagtg > 3:333404‑M2/1‑33 (MQ=255) tttACACTGCGAACTCCCTTCACAGGAGCAGAgcagtgtaaacctgtgggtcaggtttgagcagaggtatgtgtcgggataaattaactcttatcggggtcacgcccgctcccacaggagctccacggcctcgaatcaagtggagttcc < 1:116027‑M2/149‑118 (MQ=255) tttACACTGCGAACTCCCTTCACAGGAGCAGAgcagtgtaaacctgtgggtcaggtttgagcagaggtatgtgtcggcaggtttggcctcttcgagggcacgcccgctcccacaggagctccacggcctcgaatcaagtggagttcctg < 5:78188‑M2/149‑118 (MQ=255) cacTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTg < 5:222389/148‑1 (MQ=255) acTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGa < 2:175169/116‑1 (MQ=255) acTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTg > 6:20487/1‑147 (MQ=255) cTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAg < 3:293488/149‑1 (MQ=255) gCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAgat > 3:323884/1‑149 (MQ=255) aCTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGAtc > 2:26310/1‑149 (MQ=255) cTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGAtcg > 8:176726/1‑149 (MQ=255) cTTCACAGGAGCAGAgcagtgtaaacctgtgggtcaggtttgagcagaggtatgtgtcggcaggtttggcctcttcgcgggcacgcccgctcccacaggagctccacggcctcgaatcaagtggagttcctgtgaacgggcgcgtccac > 6:78188‑M2/1‑15 (MQ=255) cTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCgg > 7:133099/1‑111 (MQ=255) cTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCgg < 8:133099/111‑1 (MQ=255) cTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGa > 4:151334/1‑149 (MQ=255) ttCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGAc > 2:205429/1‑149 (MQ=255) cacaGGACCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAACGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACg < 2:296921/148‑1 (MQ=255) aGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACg < 5:189098/58‑1 (MQ=255) aGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACg > 6:189098/1‑58 (MQ=255) cagagcagTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTgcgc < 6:39533/106‑1 (MQ=255) cagagcagTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTgcgc > 5:39533/1‑106 (MQ=255) | CGCCCGTTCACAGGAACTCCACTTGATTCGAGGCCGTGGAGCTCCTGTGGGAGCGGGCGTGCCCGCGAAGAGGCCAAACCTGCCGACACATACCTCTGCTCAAACCTGACCCACAGGTTTACACTGCGAACTCCCTTCACAGGAGCAGAGCAGTGCTGACACATCTTGATTCCCAGGGGCGGGCCAACATGGTCGACGTCACTGAAAAGGCCGTGACCGAGCGCGAGGCTACCGCCGAGGCGCGGGTGCGCATGTTGCCGCAGACCTTGCAGATGATCGTCGACG > NC_002947/1478785‑1479069 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |