New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5382076	47 (0.850)	3 (0.060)	3/246	NT	6.4%	coding (179/483 nt)	smpB	SsrA‑binding protein
	?	NC_002947	= 5382099	43 (0.810)					coding (202/483 nt)	smpB	SsrA‑binding protein

GACACGATTACTTCATCGAACACAAGTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTACACCTGTGTGGCTTTGGCGCTGTACTGGAG  >  NC_002947/5381953‑5382247                                                                                                                                                     |                                                                                                                                                     gACACGATTACTTCATCGAACACAAGTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACAt                                                                                                                                                     <  1:212705‑M2/148‑2 (MQ=255)  acacGATTACTTCATCGAACACAAGTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACAtca                                                                                                                                                   <  4:189968‑M2/149‑4 (MQ=255)   cacGATTACTTCATCGAACACAAGTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACAtcac                                                                                                                                                  >  1:24322‑M2/1‑145 (MQ=255)   cacGATTACTTCATCGAACACAAGTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGAGCTGCTCAAGGACGGTGAGGCCTGGCTGTTAGGCAGCCACCtcac                                                                                                                                                  <  6:109188‑M2/149‑5 (MQ=255)            ttCATCGAACACAAGTTCGAGTCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGATCCGGCAAGTCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGTACGGTGAGGCCTGGATGTTCTGCAGCCACATCACCCCGCTCAc                                                                                                                                         >  4:136810/1‑149 (MQ=255)            ttCATCGAACACAAGTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGAc                                                                                                                                         >  5:340508/1‑149 (MQ=255)            ttCATCGAACACAAGTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGAc                                                                                                                                         >  4:142030/1‑149 (MQ=255)            ttCATCGAACACAAGTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGAc                                                                                                                                         >  3:275020/1‑149 (MQ=255)              cATCGAACACAAGTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCAGCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCa                                                                                                                                       >  7:129413/1‑149 (MQ=255)               aTCGAACACAAGTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCAc                                                                                                                                      >  6:22116/1‑149 (MQ=255)                 cGAACACAAGTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACgg                                                                                                                                    >  8:166082/1‑149 (MQ=255)                              gAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACg                                                                                                                        <  3:136810/148‑1 (MQ=255)                              gAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACg                                                                                                                        <  3:142030/148‑1 (MQ=255)                              gAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGt                                                                                                                       <  4:275020/149‑1 (MQ=255)                               aGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGAAGGTGCCAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGCCTGTTCGCCACCCACAACACCCCGCAGCCCCCGGCCAGCCCCCAc                                                                                                                         >  1:286182/1‑148 (MQ=255)                                    gggCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGc                                                                                                                 <  7:166082/149‑1 (MQ=255)                                             cTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTac                                                                                                        <  6:340508/149‑1 (MQ=255)                                                tCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGATTCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGAccc                                                                                                           <  5:250223/143‑1 (MQ=255)                                                tCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTacac                                                                                                      <  8:83879/148‑1 (MQ=255)                                                       gggAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATc                                                                                                                   >  8:13290/1‑128 (MQ=255)                                                       gggAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATc                                                                                                                   <  7:13290/128‑1 (MQ=255)                                                          aaGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAg                                                                                           >  4:132865/1‑149 (MQ=255)                                                               aaaaTCCTTCGAGCCGGCAAGGCGCAACTGA‑‑CTGACAGCTACGGGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCAAATGACGGCGCTTATGACGTCCAGCACCCAGGTCATCGCCGTCGCTACACg                                                                                                     <  8:17874/134‑1 (MQ=255)                                                               aaaaGCCTGCGAGCCGGCAAGGCGCACCTGT‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAgctgct                                                                                      >  1:31381/1‑149 (MQ=255)                                                               aaaaGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACg                                                                                                     >  7:17874/1‑134 (MQ=255)                                                                     cTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTa                                                                                                         <  2:82947/124‑1 (MQ=255)                                                                     cTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTa                                                                                                         >  1:82947/1‑124 (MQ=255)                                                                        cGAGCCGGCAACGCGCACCTGA‑‑CTCACACCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAAc                                                                               <  8:129413/147‑1 (MQ=255)                                                                            ccGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAgcgc                                                                         >  7:79986/1‑149 (MQ=255)                                                                                      gcACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGACGACCCTACACGCCCCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAga                                                               >  6:338309/1‑148 (MQ=255)                                                                                         ccTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAgctgctg                                                                                     >  7:125048/1‑124 (MQ=255)                                                                                         ccTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAgctgctg                                                                                     <  8:125048/124‑1 (MQ=255)                                                                                         ccTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGcgcg                                                            <  5:109188/149‑1 (MQ=255)                                                                                          ctga‑‑ctgaCAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGt                                                           <  2:212705/149‑1 (MQ=255)                                                                                                ctgacAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTgg                                                         >  3:83548/1‑147 (MQ=255)                                                                                                   acAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGc                                                     <  5:22116/148‑1 (MQ=255)                                                                                                   acAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCg                                                    <  2:286182/149‑1 (MQ=255)                                                                                                            tgctgcTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCAccc                                                                                                                           <  7:8558/69‑1 (MQ=255)                                                                                                            tgctgcTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCAccc                                                                                                                           >  8:8558/1‑69 (MQ=255)                                                                                                               tgctCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCa                                         >  3:83031/1‑148 (MQ=255)                                                                                                                 ctCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCaaa                                       >  6:69230/1‑148 (MQ=255)                                                                                                                    aaGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACATGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAg                                    <  3:189968/148‑1 (MQ=255)                                                                                                                     aGGACGGTGAGGCCTGGCTGTTCGGCAGCCACAtcaccgtccttgagcagcacgtagctgtcagtcaggtgcgccttgccggctcgcaggctttttacttcccagccggacaggaccagcccggcctcgaacttgtgttcgatgaagt                                   <  4:168008‑M2/148‑116 (MQ=255)                                                                                                                          ggTGAGGCCTGGCTGTTCGGCAGCCACAtcaccgtccttgagcagcacgtagctgtcagtcaggtgcgccttgccggctcgcaggctttttacttcccagccggacaggaccagcccggcctcgaactt                                                 <  7:290734‑M2/129‑102 (MQ=255)                                                                                                                          ggTGAGGCCTGGCTGTTCGGCAGCCACAtcaccgtccttgagcagcacgtagctgtcagtcaggtgcgccttgccggctcgcaggctttttacttcccagccggacaggaccagcccggcctcgaactt                                                 >  8:290734‑M2/1‑28 (MQ=255)                                                                                                                          ggTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTacac                             <  2:31381/149‑1 (MQ=255)                                                                                                                           gTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTACAcc                            >  5:150838/1‑149 (MQ=255)                                                                                                                                     gCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTACACCTGTGTGGCt                   <  3:132865/148‑1 (MQ=255)                                                                                                                                           cGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTg                                              <  1:339808/115‑1 (MQ=255)                                                                                                                                           cGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTg                                              >  2:339808/1‑115 (MQ=255)                                                                                                                                                 ccACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTACACCTGTGTGGCTTTGgcg             >  6:309092/1‑142 (MQ=255)                                                                                                                                                 ccACATCACCCCGCTGACCACGGCCAGCACCCACCTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTACACCTGTGTGGCTTTGgcg             <  5:309092/142‑1 (MQ=255)                                                                                                                                                  cacaTCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTACACCTGTGTGGCTTTGGCGCTGTACTg     <  5:69230/149‑1 (MQ=255)                                                                                                                                                   acaTCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTACACCTGTGTGGCTTTGGCGCTGTACTg     >  5:39956/1‑148 (MQ=255)                                                                                                                                                    caTCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTACACCTGTGTGGCTTTGGCGCTGTACTg     >  4:257803/1‑147 (MQ=255)                                                                                                                                                     aTCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTACACCTGTGTGGCTTTGGCGCt           >  8:114304/1‑140 (MQ=255)                                                                                                                                                     aTCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTACACCTGTGTGGCTTTGGCGCt           <  7:114304/140‑1 (MQ=255)                                                                                                                                                     aTCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTACACCTGTGTGGCTTTGGCGCTGTACTGGag  >  6:96961/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                     GACACGATTACTTCATCGAACACAAGTTCGAGGCCGGGCTGGTCCTGTCCGGCTGGGAAGTAAAAAGCCTGCGAGCCGGCAAGGCGCACCTGA‑‑CTGACAGCTACGTGCTGCTCAAGGACGGTGAGGCCTGGCTGTTCGGCAGCCACATCACCCCGCTGACCACGGCCAGCACCCACGTCATCGCCGACCCTACACGCACCCGCAAGCTGCTGCTGAACAAGCGCGAGCTCGAGCGCGTGGAAGCGGCCGTGGCGCAAAAAGGCTACACCTGTGTGGCTTTGGCGCTGTACTGGAG  >  NC_002947/5381953‑5382247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.