New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5897126	56 (1.010)	5 (0.090)	4/246	NT	8.9%	coding (263/1029 nt)	sbp‑II	sulfate ABC transporter substrate‑binding protein
	?	NC_002947	= 5897162	48 (0.900)					coding (227/1029 nt)	sbp‑II	sulfate ABC transporter substrate‑binding protein

GGGGTGCTGGCGTCAGGCAGGCGGGTCTGCCAGTTCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGTTGTACTGCTGGTACAGCTCACGGGTCGGGTCATAGGACACGTTGAGCA  >  NC_002947/5897021‑5897288                                                                                                                                              |                                                                                                                               ggggTGCTGGCGTCAGGCAGGCGGGTCTGCCAGTTCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGAccc                                                                                                                         >  6:255701/1‑149 (MQ=255)        tGGCGTCAGGCAGGCGGGTCTGCCAGTTCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATgg                                                                                                                  >  1:2174/1‑149 (MQ=255)                ggcaggcGGGTCTGCCAGTTCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTg                                                                                                          <  7:121648/149‑1 (MQ=255)                 gcaggcGGGTCTGCCAGTTCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTg                                                                                                          >  8:265290/1‑148 (MQ=255)                  caggcGGGTCTGCCAGTTCTCGGGCAGCGTCTTGCCAAGCTTCGCCACTTCGACGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCACGACCCCCCATGGGATTGCTGGa                                                                                                        >  3:314143/1‑149 (MQ=255)                   aggcGGGTCTGCCAGTTCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGAt                                                                                                       <  6:269403/149‑1 (MQ=255)                      cGGGTCTGCCAGTTCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGAttt                                                                                                     >  2:145098/1‑148 (MQ=255)                       gggTCTGCCAGTTCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTc                                                                                                   <  7:265290/149‑1 (MQ=255)                       ccgccTGCCAGTTCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTc                                                                                                   <  4:330621/145‑1 (MQ=255)                         gTCTGCCAGTTCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGTCCAGGTCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCAc                                                                                                 <  2:349370/149‑1 (MQ=255)                              ccAGTTCTCGGGCAGTGTCTTGGCTAGCTTGGCCACTTGGTCGATGTCACCGGCCAGGGGCAGGGGCACGTCGTCGGCGGGCAGGCCGTCGTTCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGt                                                                                            <  4:314143/149‑1 (MQ=255)                              ccAGTTCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGt                                                                                            >  2:273328/1‑149 (MQ=255)                                  ttCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCAc                                                                                                 <  4:105667/140‑1 (MQ=255)                                  ttCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCAc                                                                                                 >  3:105667/1‑140 (MQ=255)                                   tctcGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGc                                                                                                                                <  3:304389/108‑1 (MQ=255)                                   tctcGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGc                                                                                                                                >  4:304389/1‑108 (MQ=255)                                       gggCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCgg                                                                                     <  5:255701/147‑1 (MQ=255)                                         gCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTACACCTTGTCACCCGGGTgg                                                                                 >  6:304477/1‑149 (MQ=255)                                             ggTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCt                                                                             >  3:288637/1‑149 (MQ=255)                                                 ttGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGc                                                                               <  7:130050/143‑1 (MQ=255)                                                 ttGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGc                                                                               >  8:130050/1‑143 (MQ=255)                                                   gCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGtt                                                                          <  4:288637/146‑1 (MQ=255)                                                   gCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCACACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGc                                                                        >  5:180872/1‑148 (MQ=255)                                                     cAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAg                                                                     >  5:239795/1‑149 (MQ=255)                                                      aaGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAgt                                                                    <  6:229575/149‑1 (MQ=255)                                                          ttGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGttt                                                                >  6:306871/1‑149 (MQ=255)                                                            ggCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACTCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGttt                                                                <  6:139026/147‑1 (MQ=255)                                                             gCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGGCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATCGGTTTTGTGGTTTTTCCCCTTTTTCCCCGGGTGGGCCTGTTGCCAGTGTTtgat                                                             <  1:273328/149‑1 (MQ=255)                                                             gCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTtgat                                                             >  5:46893/1‑149 (MQ=255)                                                             gCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTtgat                                                             <  1:145098/149‑1 (MQ=255)                                                                        gATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGt                                                  <  2:217593/149‑1 (MQ=255)                                                                         aTGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGtt                                                 <  6:274685/149‑1 (MQ=255)                                                                         aTGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCACACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGtt                                                 <  6:180872/149‑1 (MQ=255)                                                                              aCCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGTTGTAct                                            >  1:9873/1‑149 (MQ=255)                                                                              aCCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGTTGTAct                                            >  2:170817/1‑149 (MQ=255)                                                                                 ggccagggccagGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGTTGTActgct                                         <  2:2174/149‑1 (MQ=255)                                                                                 ggccagggccagGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGTTGTActgct                                         <  6:239795/149‑1 (MQ=255)                                                                                  gccagggccaggGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTc                                                                                                   <  4:335898/90‑1 (MQ=255)                                                                                  gccagggccaggGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTc                                                                                                   >  3:335898/1‑90 (MQ=255)                                                                                   ccagggccagggTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGc                                                                               <  2:205697/109‑1 (MQ=255)                                                                                   ccagggccagggTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGc                                                                               >  1:205697/1‑109 (MQ=255)                                                                                       ggccagggTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGTTGTACTGCTGGTa                                     >  5:83114/1‑147 (MQ=255)                                                                                       ggccagggTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGTTGTACTGCTGGTa                                     <  6:83114/147‑1 (MQ=255)                                                                                                  ccacGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGc                                                                        <  2:326938/101‑1 (MQ=255)                                                                                                  ccacGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGc                                                                        >  1:326938/1‑101 (MQ=255)                                                                                                  ccacGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGTTGTACTGCTGGTACAGCTCAcgggtc                        <  1:170817/149‑1 (MQ=255)                                                                                                     cGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCccgacgtggtgaccctggccctggccggtgacatcgacgaagtggccaagcttggcaagaccctgcccgagaactggcagacccgcctgcctgacgccagcaccccg                     <  7:118747‑M2/149‑108 (MQ=255)                                                                                                     cGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCccgacgtggtgaccctggccctggccggtgacatcgacgaagtggccaagcttggcaagaccctgcccgagaactggcagacccgcctgcctgacgccagcaccccg                     <  1:223249‑M2/149‑108 (MQ=255)                                                                                                         ggCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCccgacgtggtgaccctggccctggccggtgacatcgacgaagtggccaagcttggcaagaccctgcccgagaactggcagacccgcctgcctgacgccagcaccccgtaca                 <  3:25131‑M2/149‑112 (MQ=255)                                                                                                              gcAGGCCGTCGATCACCGCACGGGCCTGCTTGCccgacgtggtgaccctggccctggccggtgacatcgacgaagtggccaagcttggcaagaccctgcccgagaactggcagacccgcctgcctgacgccagcaccccgtacacctcg            >  8:118747‑M2/1‑33 (MQ=255)                                                                                                                    cGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGTTGTACTGCTGGTACAGCTCACGGGTCGGGTCATAGGac            <  4:43299/143‑1 (MQ=255)                                                                                                                    cGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGTTGTACTGCTGGTACAGCTCACGGGTCGGGTCATAGGac            >  3:43299/1‑143 (MQ=255)                                                                                                                        gATCACCGCACGGGCCTGCTTGCccgacgtggtgaccctggccctggccggtgacatcgacgaagtggccaagcttggcaagaccctgcccgagaactggcagacccgcctgcctgacgccagcaccccgtacacctcgaccatcgtgt  >  2:223249‑M2/1‑23 (MQ=255)                                                                                                                        gATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGTTGTACTGCTGGTACAGCTCACGGGTCGGGTCATAGGACACGTTGAGCa  <  5:306871/149‑1 (MQ=255)                                                                                                                                cACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTACCAGTGTTTGATGAACTCGGCGTTGTACTGCTGGTACAGCTCACGGGTCGGGTCATa                >  4:216218/1‑127 (MQ=255)                                                                                                                                cACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTACCAGTGTTTGATGAACTCGGCGTTGTACTGCTGGTACAGCTCACGGGTCGGGTCATa                <  3:216218/127‑1 (MQ=255)                                                                                                                                          cTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGc                                                                               >  4:276428/1‑54 (MQ=255)                                                                                                                                          cTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGc                                                                               <  3:276428/54‑1 (MQ=255)                                                                                                                                              |                                                                                                                               GGGGTGCTGGCGTCAGGCAGGCGGGTCTGCCAGTTCTCGGGCAGGGTCTTGCCAAGCTTGGCCACTTCGTCGATGTCACCGGCCAGGGCCAGGGTCACCACGTCGGCGCGCAGGCCGTCGATCACCGCACGGGCCTGCTTGCCCGACCCCCCATGGGATTGCTGGATTTTCACCTTGTCACCCGGGTGGGCCTGTTGCCAGTGTTTGATGAACTCGGCGTTGTACTGCTGGTACAGCTCACGGGTCGGGTCATAGGACACGTTGAGCA  >  NC_002947/5897021‑5897288

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.