New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6060431 =	62 (1.120)	8 (0.160)	5/228	NT	13.1%	intergenic (+67/+114)	PP_5311/PP_5312	signal transduction protein/hypothetical protein
	?	NC_002947	6060518 =	51 (1.030)					intergenic (+154/+27)	PP_5311/PP_5312	signal transduction protein/hypothetical protein

ACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAACGCCAGCT  >  NC_002947/6060373‑6060660                                                                                                                                                   |                                                                                                                                                acaTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTaa                                                                                                                                              <  8:106308/149‑1 (MQ=255) acaTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTa                                                                                                                                               >  8:62392/1‑148 (MQ=255)  caTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTa                                                                                                                                               >  5:343817/1‑147 (MQ=255)   aTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑g                                                                                                                                           >  7:286858/1‑149 (MQ=255)    tAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑Gc                                                                                                                                          <  4:57675/149‑1 (MQ=255)       cctgaaaccaaagaagaaaggctgaagcccgacggggatgatgacgctttacCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGtc                                                                                                                                       >  7:135758‑M1/53‑149 (MQ=255)              gAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATcc                                                                                                                                <  7:188650/149‑1 (MQ=255)                     tGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTACGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCgg                                                                                                                         >  8:63485/1‑149 (MQ=255)                       tCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGc                                                                                                                       <  5:322927/149‑1 (MQ=255)                       tCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGc                                                                                                                       >  2:80527/1‑149 (MQ=255)                          tGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCtt                                                                                                                     >  1:259812/1‑148 (MQ=255)                              cAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGcc                                                                                                                >  6:193265/1‑149 (MQ=255)                                   tCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCTCCCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCttt                                                                                                             <  1:249451/148‑1 (MQ=255)                                      aaCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTtcttct                                                                                                        <  5:193265/149‑1 (MQ=255)                                       accgCTGGCGCGATGTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt                                                                                                       <  8:267700/146‑1 (MQ=255)                                       aCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt                                                                                                       >  1:258263/1‑149 (MQ=255)                                        cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt                                                                                                      <  2:259812/149‑1 (MQ=255)                                        cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTACGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt                                                                                                      <  7:63485/149‑1 (MQ=255)                                         aGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTg                                                                                                     <  7:235555/149‑1 (MQ=255)                                               cgcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCAGCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa                                                                                               <  7:194899/149‑1 (MQ=255)                                                gcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGTAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCTCGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg                                                                                              <  1:162129/149‑1 (MQ=255)                                                 cgtttttGGTCTGTGGGCGGGGGGTTTCCCGGGAAAAACGGGGCAGCCGGTGGCATTCACCGCGTGGCTTGGTTGGGGGGCAAGGCCGCT‑CCCAAATGTAAACGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg                                                                                              <  1:80527/146‑1 (MQ=255)                                                  gacgctttacctgtgggagcgggcgtgcccgcgaaacaagcgacgcggtgcatggcaccggcttcgccggtgttcgcgggcaagcccgctcccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAgg                                                                                             >  7:135758‑M2/98‑149 (MQ=255)                                                    ttttGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTAt                                                                                          >  4:283965/1‑149 (MQ=255)                                                      ttGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTAtt                                                                                         <  6:184443/148‑1 (MQ=255)                                                          aCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcatc                                                                                    <  7:62392/149‑1 (MQ=255)                                                              tgGGAGCGGGCTTGCCCCCCAACACCGGCGCAGCCGGTTCCAAGCACCTCGTCGCTTGTTTCGCGGGGACGCCCCCA‑CCCACACGTAAA‑GCGTCCACATCCCCGACGGGCTTCAGCCGTTGATCATTGGTTTCAGGTATTTCATCAAcc                                                                                >  4:342492/1‑149 (MQ=25)                                                              TGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAcc                                                                                <  6:92596‑M1/149‑1 (MQ=255)                                                              TGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAcc                                                                                >  8:286858‑M1/1‑149 (MQ=255)                                                                ttcGCGGGCAAGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAcccc                                                                              <  4:232248‑M1/146‑1 (MQ=255)                                                                GGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAccc                                                                               >  3:283965‑M1/1‑148 (MQ=255)                                                                 GAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCAGCGGGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCt                                                                             >  3:342492‑M1/1‑149 (MQ=255)                                                                     GGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGaa                                                                         >  2:258263‑M1/1‑149 (MQ=255)                                                                       GCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCACCCCCTGGAAc                                                                        <  5:52258‑M1/148‑1 (MQ=255)                                                                       GCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTCCTTCTTTGGTTTCAg                                                                                              >  8:148023‑M1/1‑126 (MQ=255)                                                                       GCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTCCTTCTTTGGTTTCAg                                                                                              <  7:148023‑M1/126‑1 (MQ=255)                                                                             ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCa                                                                 >  1:283549/1‑149 (MQ=255)                                                                              cgcgAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCAc                                                                >  3:71266/1‑149 (MQ=255)                                                                              ccgcgaaacaagcgacgcggtgcatggcaccggcttcgccggtgttcgcgggcaagcccgctcccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa                                                                                               >  4:167661‑M2/70‑119 (MQ=255)                                                                              ccgcgaaacaagcgacgcggtgcatggcaccggcttcgccggtgttcgcgggcaagcccgctcccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa                                                                                               <  3:167661‑M2/50‑1 (MQ=255)                                                                              ccgcgaaacaagcgacgcggtgcatggcaccggcttcgccggtgttcgcgggcaagcccgctcccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCa                                                                 >  7:229288‑M2/70‑149 (MQ=255)                                                                                cgAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCtt                                                                                                                     <  3:289132/94‑1 (MQ=255)                                                                                cgAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCtt                                                                                                                     >  4:289132/1‑94 (MQ=255)                                                                                 gAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAg                                                             >  4:334805/1‑149 (MQ=255)                                                                                   acacCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAgcg                                                           >  4:321672/1‑149 (MQ=255)                                                                                    cacCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAgcgc                                                          <  1:344121/149‑1 (MQ=255)                                                                                      ccGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg                                                                                              >  7:300057/1‑111 (MQ=255)                                                                                      ccGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg                                                                                              <  8:300057/111‑1 (MQ=255)                                                                                       cGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcgt                                                                                     >  4:34527/1‑117 (MQ=255)                                                                                       cGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcgt                                                                                     <  3:34527/119‑3 (MQ=255)                                                                                       cGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcat                                                                                     >  4:34528/1‑119 (MQ=255)                                                                                       cGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcat                                                                                     <  3:34528/119‑1 (MQ=255)                                                                                       cGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCgg                                                       >  5:363121/1‑149 (MQ=255)                                                                                         gcgacgcggtgcatggcaccggcttcgccggtgttcgcgggcaagcccgctcccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCggg                                                      <  8:135758‑M2/91‑1 (MQ=255)                                                                                                  gTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGa                                            <  5:92596/149‑1 (MQ=255)                                                                                                  gTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGa                                            <  6:363121/149‑1 (MQ=255)                                                                                                        tGCACCGAGTCGCTTGTTTCGCGGGGACGCGCGCT‑CCCAGAGGTAAA‑GCTTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTTTTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGa                                      <  4:216365/149‑1 (MQ=255)                                                                                                          cACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGAt                                     <  2:283549/148‑1 (MQ=255)                                                                                                           aCCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTgg                                                                           <  4:252263/109‑1 (MQ=255)                                                                                                           aCCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTgg                                                                           >  3:252263/1‑109 (MQ=255)                                                                                                            ccGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGAtgtg                                  >  5:202482/1‑149 (MQ=255)                                                                                                               cgTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTttctt                                                                                                          <  4:101369/74‑1 (MQ=255)                                                                                                               cgTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTttctt                                                                                                          >  3:101369/1‑74 (MQ=255)                                                                                                                 tCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATAATCCCCGTCGCGCTTCAGCCTGTCTTCTTTGGTATCAGGTATTTCATCAACCCCAGGAACCACATCCCCAGCGCCGGGTTCCCCTTGATCTGGATGTGCTTGt                             >  8:57634/1‑149 (MQ=255)                                                                                                                  cGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTc                            <  4:71266/149‑1 (MQ=255)                                                                                                                    cTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCt                          <  6:343817/149‑1 (MQ=255)                                                                                                                    cTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCt                          >  3:240633/1‑149 (MQ=255)                                                                                                                         gggagcgggcgtgcccgctcccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAAt                      >  3:16902‑M2/27‑149 (MQ=255)                                                                                                                           cgcgGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATccc                   >  2:260459/1‑149 (MQ=255)                                                                                                                             gcgggcgtgcccgctcccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCt                  <  4:16902‑M2/127‑1 (MQ=255)                                                                                                                             gcgggcaagcccgctcccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCt                  <  8:229288‑M2/127‑1 (MQ=255)                                                                                                                             cgGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCtt                 <  6:52258/149‑1 (MQ=255)                                                                                                                                 cACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCAt             >  3:104185/1‑149 (MQ=255)                                                                                                                                      cccgctcccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAAc         <  6:202482‑M2/136‑1 (MQ=255)                                                                                                                                         taggccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAACGcc      <  2:78987‑M2/139‑1 (MQ=255)                                                                                                                                         gctcccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAACGcc      <  3:321672‑M2/139‑1 (MQ=255)                                                                                                                                             ccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGc                                 <  1:49036‑M2/112‑1 (MQ=255)                                                                                                                                             ccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGc                                 >  2:49036‑M2/7‑118 (MQ=255)                                                                                                                                             ccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAACGCCa     <  5:18227‑M2/140‑1 (MQ=255)                                                                                                                                             ccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAACGCCa     >  6:18227‑M2/7‑146 (MQ=255)                                                                                                                                             ccacagGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAACGCCAgct  >  5:51490‑M2/7‑149 (MQ=255)                                                                                                                                                   |                                                                                                                                                ACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGTTTCGCGGGCACGCCCGCT‑CCCACAGGTAAA‑GCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTTGTCCTGAATCCCTTGCATGAACGCCAGCT  >  NC_002947/6060373‑6060660

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.