| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,620,295 | T→G | 8.1% | S20R (AGC→CGC) | PP_3190 ← | ornithine cyclodeaminase/mu‑crystallin family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,620,295 | 0 | T | G | 8.1% | 228.1 / 10.1 | 74 | S20R (AGC→CGC) | PP_3190 | ornithine cyclodeaminase/mu‑crystallin family protein |
| Reads supporting (aligned to +/- strand): ref base T (34/34); new base G (4/2); total (38/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.68e-01 | |||||||||||
AAAGCTTGACGGTGAAGGTCGGGCTGCCTTCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAGGATCACGGCGACACGCTTGCCCTGATAGCGTTCGGCGAGCCT > NC_002947/3620148‑3620441 | aaaGCTTGACGGTGAAGGTCGGGCTGCCTTCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCt > 4:286659/1‑148 (MQ=255) ttgcgtgaagtcggcctacatcgaaggcagcccgaccttcacGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTg < 6:329555‑M2/100‑1 (MQ=255) ttgcgtgaagtcggcctacatcgaaggcagcccgaccttcacGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTg > 5:329555‑M2/43‑142 (MQ=255) tgcgtgaagtcggcctacatcgaaggcagcccgaccttcacGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCaa > 3:122169‑M2/42‑149 (MQ=255) ggTGAAGGTCGGGCTGCCTTCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACt > 2:173874/1‑149 (MQ=255) GTGAAGGTCGGGCTGCCTTCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCGGTCAGCCAActg > 8:23383‑M1/1‑148 (MQ=255) GTGAAGGTCGGGCTGCCTTCGATGTAGGCCGACTTCACGCAACAGGCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCGGTCAGCCAActg > 6:92668‑M1/1‑148 (MQ=255) TGAAGGTCGGGCTGCCTTCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCATTTGGCTGACGGCCAACtcg > 2:136764‑M1/1‑148 (MQ=255) GAAGGTCGGGCTGCCTTCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCg < 4:319768‑M1/149‑1 (MQ=255) tGCCTTCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATgg > 6:51413/1‑149 (MQ=255) gCCTTCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGCCACCAGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTAGGCTGACCGCCAACTCAGCTTTGAAATggc > 2:231518/1‑148 (MQ=255) ccTTCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTTCACCGGCGGCAACTTCACCTTTCCTTCGGAATAGGCGGATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATggg < 1:85513/149‑1 (MQ=255) ccTTCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGaaa > 1:159452/1‑144 (MQ=255) ccTTCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGaaa < 2:159452/144‑1 (MQ=255) ttCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATggg > 7:298019/1‑146 (MQ=255) ttCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATggg < 8:298019/146‑1 (MQ=255) ttCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGcga > 2:79137/1‑149 (MQ=255) ttCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGc < 7:57641/147‑1 (MQ=255) ttCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGc > 8:57641/1‑147 (MQ=255) ttCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCAGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGcga > 5:204459/1‑149 (MQ=255) tGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTg > 5:246990/1‑134 (MQ=255) tGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTg < 6:246990/134‑1 (MQ=255) gTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCt > 6:113909/1‑149 (MQ=255) tAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑g < 1:173874/149‑1 (MQ=255) aGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCGGTCAGCCAACtg < 1:196666/124‑2 (MQ=255) aGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCGGTCAGCCAACtg > 2:196666/1‑123 (MQ=255) ggCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑gcg > 6:92935/1‑149 (MQ=255) gCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑gcgc > 2:294455/1‑149 (MQ=255) gCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑gcgc < 3:319768/149‑1 (MQ=255) ccGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGcc > 4:254180/1‑149 (MQ=255) gACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCtt < 2:128/149‑1 (MQ=255) aCTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTg > 3:167741/1‑149 (MQ=255) acGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGaa > 6:317213‑M2/3‑149 (MQ=255) acGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGaa < 5:51413‑M2/147‑1 (MQ=255) aCCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCAtt < 4:167741/148‑1 (MQ=255) aCCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCAtt < 5:113909/148‑1 (MQ=255) ccGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTg > 3:1754/1‑148 (MQ=255) cGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGaa > 6:83542/1‑149 (MQ=255) gTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAAc < 3:286659/149‑1 (MQ=255) ttCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCACCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACg > 3:188792/1‑149 (MQ=255) gcCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAGCCCTTCCTCCAGTTGGCTGACCGCCAACTCCggg < 1:218660/98‑1 (MQ=255) gcCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCggg > 2:218660/1‑97 (MQ=255) ccTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGa < 3:254180/149‑1 (MQ=255) ccTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCACCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGa < 4:188792/149‑1 (MQ=255) cTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAg > 5:126609/1‑149 (MQ=255) gAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAgg < 2:48751/147‑1 (MQ=255) aTGCGAAGCCCTTCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCGAACTCCGGGTTGAAATGGGCGAGGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAAc < 1:231518/148‑1 (MQ=255) gAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTc < 5:289303/149‑1 (MQ=255) aaGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTcc < 4:122169/149‑1 (MQ=255) aGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCca < 5:317213/149‑1 (MQ=255) gCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCTAGCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCca < 1:79137/149‑1 (MQ=255) aCGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGaa < 6:113646/133‑1 (MQ=255) aCGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGaa > 5:113646/1‑133 (MQ=255) aCGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCcagca > 8:143708/1‑144 (MQ=255) aCGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCcagca < 7:143708/144‑1 (MQ=255) ggcggcACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTa < 8:38871/149‑1 (MQ=255) gcacctgcacctTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGa > 5:52187/1‑99 (MQ=255) gcacctgcacctTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGa < 6:52187/99‑1 (MQ=255) cacctgcacctTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAg > 5:94803/1‑122 (MQ=255) cacctgcacctTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAg < 6:94803/122‑1 (MQ=255) cacctTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAg < 6:204459/149‑1 (MQ=255) cacctTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAg < 4:1754/149‑1 (MQ=255) acctTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAg > 4:293008/1‑148 (MQ=255) gC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCca < 6:136716/108‑1 (MQ=255) gC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCca > 5:136716/1‑108 (MQ=255) tGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAGGATCACGGc < 2:54779/135‑1 (MQ=255) tGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAGGATCACGGc > 1:54779/1‑135 (MQ=255) aG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAGGATCACGGCGACACGCTTGCCCTGAt < 3:293008/149‑1 (MQ=255) cTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAGGATCACGGCGACACGCTTGCCCTGATAGc > 3:24122/1‑149 (MQ=255) cTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAGGATCACGGCGACACGCTTGCCCTGATAGc < 4:24122/149‑1 (MQ=255) cccggaGTTGGCGGTCAGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAGGATCACGGCGACACGCTTGCCCTGATAGCGtt > 1:174084/6‑149 (MQ=255) tccAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCCCACAGGATCACGGCGACACGCTTGCCCTGATAGCGTTCg > 8:51000/1‑149 (MQ=255) gTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACACTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAGGATCACGGCGACACGCTTGCCCTGATAGCGTTCGGc > 6:197046/1‑147 (MQ=255) gTTGGCGGTCAGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAGGATCACGGCGACACGCTTGCCCTGATAGCGTTCGGCGa < 2:174084/149‑1 (MQ=255) gCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAGGATCACGGCGACACGCTTGCCCTGATAGCGTTCGGCGAGCct > 3:74403/1‑149 (MQ=255) | AAAGCTTGACGGTGAAGGTCGGGCTGCCTTCGATGTAGGCCGACTTCACGCAACAGTCACCGTTCGCGCCCTTGAATGCGAAGCCCTGCACGGGCGGCACCTGCACCTTGCCTTCGGAATAGGC‑GATGAAG‑CCTTCCTCCAGTTGGCTGACCGCCAACTCCGGGTTGAAATGGGCGACGATCT‑GCGCCTTGCTGAAGACCCTCATTGAACGGCCTCGAGGAACTTTTCCAGCAGGATGTTACGGCCACACAGGATCACGGCGACACGCTTGCCCTGATAGCGTTCGGCGAGCCT > NC_002947/3620148‑3620441 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |