| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,644,948 | C→T | 9.7% | intergenic (‑43/+23) | PP_3211 ← / ← PP_3212 | ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,644,948 | 0 | C | T | 9.7% | 230.4 / 9.8 | 82 | intergenic (‑43/+23) | PP_3211/PP_3212 | ABC transporter ATP‑binding protein/Rieske 2Fe‑2S family protein |
| Reads supporting (aligned to +/- strand): ref base C (38/36); new base T (3/5); total (41/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.95e-01 | |||||||||||
AGGTTTTTTCCACCTGATTGGCGAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTGCGGCGGGTGTC > NC_002947/3644803‑3645090 | aGGTTTTTTCCACCTGATTGGCGAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCTTGAGCGGTGGTGTATGCCCCGGCGCa > 8:54188/1‑149 (MQ=255) tttttCCACCTGATTGGCGAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCgg > 6:326998/1‑149 (MQ=255) ttCTACCTGATTGGCTAACAAAGGGGTGTCCACACCGATGGTGTTCGTCAGGGCCTGCGGCTGGACGGCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGTGCGCCgggg < 4:298636/148‑1 (MQ=255) ccACCTGATTGGCGAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGt > 2:221460/1‑149 (MQ=255) cACCTGATTGGCGAACAAAGGGGTGTCCTCACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATACCGCTCTCCCCGTGGGTCATGAGCGGGGGTGTATGCCCCGGTGCGCCGGTGcata < 6:80517/149‑4 (MQ=255) aCCTGATTGGCGAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTg < 3:49427/149‑1 (MQ=255) aCCTGATTGGCGAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTg < 3:181086/149‑1 (MQ=255) aCCTGATTGGCGAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTg < 1:221460/149‑1 (MQ=255) aCCTGATTGGCGAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTg > 4:49427/1‑149 (MQ=255) ccTGATTGGCGAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTgg < 3:311683/149‑1 (MQ=255) gCGAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAgtgt > 7:33254/1‑149 (MQ=255) cGAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTc < 6:317146/149‑1 (MQ=255) gAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAgtgt > 4:267954/1‑147 (MQ=255) gAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAgtgt < 3:267954/147‑1 (MQ=255) gAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCa < 4:33583/149‑1 (MQ=255) aaCAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCTTGAGCGGTGGTGTATGCCCCGTCGCACCGGGGCGTTGGGCAAGTGTCAg < 7:54188/149‑1 (MQ=255) aaCAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAg > 2:37452/1‑149 (MQ=255) gggTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCt > 2:346445/1‑147 (MQ=255) ggTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAg < 5:120089/149‑1 (MQ=255) tCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGaa > 7:7513/1‑148 (MQ=255) cacaCCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAacac > 1:144946/1‑149 (MQ=255) acCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTc > 6:301657/1‑149 (MQ=255) tgtTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGaa > 2:186954/1‑135 (MQ=255) tgtTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGaa < 1:186954/135‑1 (MQ=255) tgtTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGc < 7:329797/149‑1 (MQ=255) ggCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGa < 3:310109/126‑1 (MQ=255) ggCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATgg > 5:118886/1‑149 (MQ=255) ggCAGGGCCTGCGCCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGa > 4:310109/1‑126 (MQ=255) cAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAGCTGGCTGAGGAACACTTCGCTCTCGCCATggg < 1:37452/149‑1 (MQ=255) aGGGCCGGCGGCTGGACGTCGGGCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTTGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCt < 8:326557/149‑1 (MQ=255) gggCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCt > 5:241816/1‑148 (MQ=255) gCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTc > 6:220690/1‑148 (MQ=255) ccTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCggg > 7:232815/1‑94 (MQ=255) ccTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCggg < 8:232815/94‑1 (MQ=255) ccTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCaa < 8:33254/149‑1 (MQ=255) cTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAg < 6:348063/149‑1 (MQ=255) aCGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGa > 2:248296/1‑143 (MQ=255) aCGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGa < 1:248296/143‑1 (MQ=255) cGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCagta < 5:220690/149‑1 (MQ=255) ggCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGtt < 5:108320/148‑1 (MQ=255) ccTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGCGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTGCCAGCAGACCAAGGGGTTGcc > 8:257909/1‑149 (MQ=255) ggATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGAc < 1:346445/148‑1 (MQ=255) aTAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGa > 7:78914/1‑149 (MQ=255) ggTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATaac < 6:118886/149‑1 (MQ=255) tCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATaacc > 7:112475/1‑148 (MQ=255) gCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTc < 1:162761/114‑1 (MQ=255) gCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTc > 2:162761/1‑114 (MQ=255) aTCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCg > 3:163883/1‑149 (MQ=255) tCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCtctc < 5:338789/99‑1 (MQ=255) tCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCtctc > 6:338789/1‑99 (MQ=255) aaCATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGc < 8:7513/149‑1 (MQ=255) aCATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCt > 5:11396/1‑149 (MQ=255) cATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCtt < 5:326998/149‑1 (MQ=255) gcTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGa > 3:18264/1‑149 (MQ=255) tcCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATgg > 5:352351/1‑148 (MQ=255) tcCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATgg > 3:12422/1‑148 (MQ=255) cccGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCAt > 3:53944/1‑149 (MQ=255) cccGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCAt < 4:18264/149‑1 (MQ=255) cccGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCAt > 4:342074/1‑149 (MQ=255) ccGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCAtg > 8:225148/1‑149 (MQ=255) gAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCAc > 6:152886/1‑149 (MQ=255) aGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCAcc < 6:11396/149‑1 (MQ=255) gtgtATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTgcggc > 7:197651/1‑149 (MQ=255) tgtATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTgcggcg < 7:225148/149‑1 (MQ=255) ccaacgCCCCGGTGCGCCGGGGCATTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTgcggcg > 2:296951/6‑149 (MQ=255) caacgCCCCGGTGCGCCGGGGCATTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTgcg < 7:149117/141‑1 (MQ=255) caacgCCCCGGTGCGCCGGGGCATTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTgcg > 8:149117/5‑145 (MQ=255) tATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTgcggcg < 5:330535/147‑1 (MQ=255) tATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTgcggcg > 6:330535/1‑147 (MQ=255) tATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTGcggcgg < 5:152886/148‑1 (MQ=255) aacgCCCCGGTGCGCCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATaac < 1:359447/99‑1 (MQ=255) aacgCCCCGGTGCGCCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATaac > 2:359447/4‑102 (MQ=255) acgCCCCGGTGCGCCGGGGCATTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTGCGGCGGgt < 1:296951/147‑1 (MQ=255) gCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTGCGGCGGgtg < 6:241816/148‑1 (MQ=255) ccccGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCag < 3:348330/80‑1 (MQ=255) ccccGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCag > 4:348330/1‑80 (MQ=255) ccccGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTcc < 4:277214/114‑1 (MQ=255) ccccGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTcc > 3:277214/1‑114 (MQ=255) ccccGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTGCGGCGGgtgt < 2:144946/148‑1 (MQ=255) ccccGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTGCGGCGGGTGTc < 5:301657/149‑1 (MQ=255) ccccGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCATGCGGCGGGTGTc > 4:219373/1‑149 (MQ=255) cccGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTGCGGCGGGTGTc > 5:178453/1‑148 (MQ=255) | AGGTTTTTTCCACCTGATTGGCGAACAAAGGGGTGTCCACACCGATGGTGTTCGGCAGGGCCTGCGGCTGGACGTCGGCCTTGGATAGGGTCTGCATCAACATAGCGCTCTCCCCGTGGGTCATGAGCGGTGGTGTATGCCCCGGCGCACCGGGGCGTTGGGCAAGTGTCAG‑TGGCTGAGGAACACTTCGCTCTCGCCATGGGCTTCAAGCAGACCCAGTAGTTGCCGACGGATAACCAACCCGGGCTTGTCCGATGGCATGTGCAGTTCCACCCTGCGGCGGGTGTC > NC_002947/3644803‑3645090 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |