| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,680,737 | C→G | 6.6% | intergenic (+23/+21) | crtZ → / ← PP_3247 | beta‑carotene hydroxylase/bile acid/Na+ symporter family transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,680,737 | 0 | C | G | 6.6% | 231.6 / 3.6 | 72 | intergenic (+23/+21) | crtZ/PP_3247 | beta‑carotene hydroxylase/bile acid/Na+ symporter family transporter |
| Reads supporting (aligned to +/- strand): ref base C (33/34); new base G (3/2); total (36/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.26e-01 | |||||||||||
GCGCGCACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTCG > NC_002947/3680593‑3680879 | gcgcgcACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGc > 6:52043/1‑149 (MQ=255) aCCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGACGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGCCGCATCCCTGGCACGCCCGGCCCCTGCCGGGCa > 8:181480/1‑149 (MQ=255) aCCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGc > 4:157236/1‑143 (MQ=255) aCCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGc < 3:157236/143‑1 (MQ=255) aCCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCa > 4:3078/1‑149 (MQ=255) ttGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCgg > 6:147250/1‑141 (MQ=255) ttGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCgg < 5:147250/141‑1 (MQ=255) aCCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCggg > 7:14909/1‑145 (MQ=255) aCCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCggg < 8:14909/145‑1 (MQ=255) aCCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGa > 7:146082/1‑148 (MQ=255) aCCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGa > 3:138237/1‑148 (MQ=255) cATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAACCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAAt > 5:345123/1‑149 (MQ=255) aTGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCggg < 5:356388/135‑1 (MQ=255) aTGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCggg > 6:356388/1‑135 (MQ=255) aTGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCg > 6:191757/1‑140 (MQ=255) aTGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCg < 5:191757/140‑1 (MQ=255) ggCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGttt < 7:124337/149‑1 (MQ=255) ggCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGttt < 5:52043/149‑1 (MQ=255) ggCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGttt < 5:228430/149‑1 (MQ=255) ggggAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGTGTGAAATCAGTTCACGGTTTCACCCtt < 4:40862/149‑1 (MQ=255) ggggAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCtt < 6:308594/149‑1 (MQ=255) ggggAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCtt < 7:262714/149‑1 (MQ=255) gggAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTg < 3:130709/149‑1 (MQ=255) cGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCt > 4:144654/1‑148 (MQ=255) gTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAgccgc > 1:249029/1‑149 (MQ=255) ttCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAAGCGTGACGCATCCATGGCACGCCCGGCACCTGCCGGGCATCGGTGGAAATCAGTTAACGGTTTAACCCTTGGGGACAgccgcc > 2:218286/1‑149 (MQ=255) ggTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACAt < 8:119987/149‑1 (MQ=255) ctATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTg < 2:37635/126‑1 (MQ=255) ctATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTg > 1:37635/1‑126 (MQ=255) ctATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCcgc < 3:144654/148‑1 (MQ=255) gccgccgcTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTca < 7:219305/148‑1 (MQ=255) gccgccgcTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCAACCTTGGGCTCAGCCGGCACATGCCCGCGGGTca > 8:219305/1‑148 (MQ=255) cgccgcTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTcacc > 5:23057/1‑148 (MQ=255) gccgcTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGATATCAGTTCAAGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGTCTcaccca < 8:120301/149‑1 (MQ=255) ccgcTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTcacccac > 6:151425/1‑149 (MQ=255) gcTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACccacca < 6:23057/149‑1 (MQ=255) cTGAAGGTGTTGAAGCAGCAATTGCGCAGCTGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAg > 1:30490/1‑149 (MQ=255) aaGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGcc > 5:161616/1‑148 (MQ=255) ggTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCaaa < 1:10788/149‑1 (MQ=255) ggTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCaaa < 3:3078/149‑1 (MQ=255) gAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑Gc > 1:293609/1‑149 (MQ=255) gAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑Gc > 3:82898/1‑149 (MQ=255) aaGCAGCAATTGCGCAGCAGGCGCAACCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑Gcc < 6:345123/149‑1 (MQ=255) caATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGt > 5:336877/1‑148 (MQ=255) aaTTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCGCACCCCCCCGCCAAACCCG‑‑GCCGCGGTa > 8:222046/1‑148 (MQ=255) ttGCTCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAg < 4:347759/149‑1 (MQ=255) gcagcaGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACa > 2:93128/1‑149 (MQ=255) gcagcaGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACa < 2:284092/149‑1 (MQ=255) gcagGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGa > 6:296581/1‑149 (MQ=255) gcagGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGa < 1:66196/149‑1 (MQ=255) gcgcAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCt < 2:147885/85‑1 (MQ=255) gcgcAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCt > 1:147885/1‑85 (MQ=255) gcAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GACGCGCTAAAGAACATGATCAAg > 5:351816/1‑148 (MQ=255) cAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCt < 5:296581/149‑1 (MQ=255) cAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTAc < 7:222046/149‑1 (MQ=255) aTCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACaa < 2:249029/149‑1 (MQ=255) aTCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCgg > 4:32818/1‑148 (MQ=255) tCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCa > 5:187145/1‑149 (MQ=255) ccTGGGACGCCCGGCACCTGCCGGGCATCGGGTGTAATCTGTTCTCTGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCTCCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCAc < 6:14890/148‑1 (MQ=255) ccTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCAcc < 2:293609/149‑1 (MQ=255) ccgatgCCCGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGc > 3:303696/6‑148 (MQ=255) gCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGGTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGcc < 8:146082/148‑1 (MQ=255) cgatgCCCGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTa > 7:336362/5‑109 (MQ=255) cgatgCCCGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTa < 8:336362/105‑1 (MQ=255) aCGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATg < 3:32818/149‑1 (MQ=255) tgCCCGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATgg > 1:244126/2‑149 (MQ=255) cccGGCAGGTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGt < 2:244126/148‑1 (MQ=255) cccGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCGATGCGGCGGTAAAGAACATAATCAAGCTGTACAACGCAGCCGCCACCGCCATgg > 1:294692/1‑149 (MQ=255) cccGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTc < 7:181480/149‑1 (MQ=255) ccGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGaa < 4:140600/108‑1 (MQ=255) ccGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGaa > 3:140600/1‑108 (MQ=255) ccGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTcg > 1:327795/1‑149 (MQ=255) | GCGCGCACCGCTTGCACCATGCGGTGAAGGGGCGCACGGGGAGCGTGTCGTTCGGGTTCTTCTATGCGCCGCCGCTGAAGGTGTTGAAGCAGCAATTGCGCAGCAGGCGCAGCCAATCGTGACGCATCCCTGGCACGCCCGGCACCTGCCGGGCATCGGGTGAAATCAGTTCACGGTTTCACCCTTGGGCTCAGCCGCCACATGCCCGCGGCTCACCCACCAGCCAAACCCG‑‑GCCGCGGTAAAGAACATGATCAAGCTGTACAACGCAGCCGGCACCGCCATGGTCG > NC_002947/3680593‑3680879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |