| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,717,746 | A→T | 8.4% | M18K (ATG→AAG) ‡ | paaH ← | 3‑hydroxyacyl‑CoA dehydrogenase PaaC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,717,746 | 0 | A | T | 8.4% | 191.4 / 5.0 | 68 | M18K (ATG→AAG) ‡ | paaH | 3‑hydroxyacyl‑CoA dehydrogenase PaaC |
| Reads supporting (aligned to +/- strand): ref base A (30/32); new base T (4/2); total (34/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AGCGGCCAGTAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGGCGCT > NC_002947/3717601‑3717886 | aGCGGCCAGTAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATg < 8:24907/148‑1 (MQ=255) gCCAGTAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGTCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGcc < 6:63539/149‑1 (MQ=255) gCCAGTAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGcc > 4:190956/1‑149 (MQ=255) ccAGTAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCg < 3:300686/149‑1 (MQ=255) aGTAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCgg > 1:236603/1‑148 (MQ=255) gTAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCa > 2:22556/1‑149 (MQ=255) tAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCAc < 3:19830/149‑1 (MQ=255) cTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCAcc > 5:218312/1‑149 (MQ=255) cTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCAcc < 2:161722/149‑1 (MQ=255) tttGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCg > 1:116484/1‑149 (MQ=255) tCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCAc < 5:185464/149‑1 (MQ=255) caccaGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCt > 4:15279/1‑149 (MQ=255) gggCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑GCCGGCGCCATGGGCGCCg > 8:236554/1‑122 (MQ=255) gggCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑GCCGGCGCCATGGGCGCCg < 7:236554/122‑1 (MQ=255) ggCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACAttgc < 2:116484/149‑1 (MQ=255) cAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACAttgcttg > 5:212631/1‑149 (MQ=255) aGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACAttgcttgc < 1:483/149‑1 (MQ=255) gTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGATAACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACAttgcttgc < 1:89169/149‑1 (MQ=255) gTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGAACCCGGGCGGTTATCGTAGCGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCAcc > 3:334823/1‑121 (MQ=255) ttGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGa < 6:218312/149‑1 (MQ=255) gCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTg > 8:340394/1‑149 (MQ=255) cgatcgatACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGc > 3:88161/1‑149 (MQ=255) gatcgatACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGTGAT‑ACCGGCGCCCATGGCGCCGGCAc < 1:311624/114‑1 (MQ=255) gatcgatACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGTGAT‑ACCGGCGCCCATGGCGCCGGCAc > 2:311624/1‑114 (MQ=255) gatcgatACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCg < 3:190956/149‑1 (MQ=255) ccGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCAtttt > 1:65827/1‑148 (MQ=255) ccGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTc < 2:236603/149‑1 (MQ=255) tCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAgc > 7:14008/1‑149 (MQ=255) ccTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCt > 2:40102/1‑149 (MQ=255) gggCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTg > 7:172975/1‑148 (MQ=255) gggCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGa < 4:75702/149‑1 (MQ=255) ggcggcAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGaa < 4:88161/149‑1 (MQ=255) ggcggcAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGaa < 1:40102/149‑1 (MQ=255) ggcggcAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGaa < 1:337584/149‑1 (MQ=255) agcaCCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTg > 7:288083/1‑148 (MQ=255) agcaCCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTg < 8:288083/148‑1 (MQ=255) ccGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGgcgtgc < 7:340394/149‑1 (MQ=255) ggTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGt < 8:172975/149‑1 (MQ=255) gTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGtt < 6:212631/149‑1 (MQ=255) tATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCa > 1:210096/1‑149 (MQ=255) gTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGaa < 6:946/149‑1 (MQ=255) gagCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGcccc < 7:213847/117‑1 (MQ=255) gagCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGcccc > 8:213847/1‑117 (MQ=255) cTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCAttt > 1:180227/1‑104 (MQ=255) cTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCAttt < 2:180227/104‑1 (MQ=255) gggTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCACGAAGGCGTGAACGCCt > 2:9642/1‑149 (MQ=255) gTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCACGAAGGCGTGAACGCCTTc < 1:9642/149‑1 (MQ=255) tGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTcg < 8:14008/149‑1 (MQ=255) ggccggccTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTcgc > 8:2998/1‑149 (MQ=255) gccggccTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTcgcg < 3:15279/149‑1 (MQ=255) cggccTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCgg > 2:305381/1‑148 (MQ=255) cggccTGGGCCGCGACCTGGGCGAT‑AACGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCgg > 1:192498/1‑148 (MQ=255) cTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTc < 1:284016/149‑1 (MQ=255) ggCCGCGACCTGGGCGAT‑AGCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTGAGCGCCCCTTGAAGGCGGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTcc < 2:65827/147‑1 (MQ=255) ccGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGc > 2:260055/1‑149 (MQ=255) cgcgACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACGGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCt > 1:251462/1‑149 (MQ=255) aCCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGTGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTgcgc < 1:260055/149‑1 (MQ=255) cTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGccc > 7:142390/1‑149 (MQ=255) tcggtgccGGCGCCATGGGCGCCGGTACCGACCACCGCCACCTGGACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCGTGCAGGCTGGCGTGCGTTTGTTCATGCAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGc > 1:10917/7‑148 (MQ=255) cGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGc > 6:88294/1‑147 (MQ=255) cGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCa < 2:210096/149‑1 (MQ=255) tgccGGCGCCATGGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAg < 6:154077/145‑1 (MQ=255) tgccGGCGCCATGGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAg > 5:154077/3‑147 (MQ=255) cGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGGCGCt > 4:220404/1‑149 (MQ=255) cGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGGCGCt > 3:145234/1‑149 (MQ=255) cGGCGCCATGGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGGCGCt > 8:249979/1‑149 (MQ=255) ggCGCCCATGGCGCCGGCACCGATCACCGGCACCTGCTCATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGc < 1:61250/104‑1 (MQ=255) ggCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGCCGAGCGTTTGTTCAAGAAGGc > 2:61250/1‑104 (MQ=255) | AGCGGCCAGTAACTTTCCTTTGTCCACCAGCCGGGCCAGTTGGCGATCGATACCCGTCACCGCCTGGGCGGCAGCACCCGGGCGGTTATCGTAGAGCTTGACGGGGTGGCCGGCCTGGGCCGCGACCTGGGCGAT‑ACCGGCGCCCATGGCGCCGGCACCGATCACCGCCACCTGCACATTGCTTGCGAGTGCGGCCATTTTCAGCGCCCCTTGAAGGCTGGCGTGCGTTTGTTCATGAAGGCGTTCACGCCTTCGCGGTAGTCCTCGCTGCGCCCTGCCAGGCGCT > NC_002947/3717601‑3717886 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |