Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 274,692 T→C 5.4% K419R (AAG→AGG)  PP_0222 ← DszA family monooxygenase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_002947274,6920TC 5.4% 219.8 / 2.1 75K419R (AAG→AGG) PP_0222DszA family monooxygenase
Reads supporting (aligned to +/- strand):  ref base T (32/38);  new base C (2/2);  total (35/40)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.46e-01

GGAACAGTTTCTCAAGCATGGTGCAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCA  >  NC_002947/274551‑274835
                                                                                                                                             |                                                                                                                                               
ggAACAGTTTCTCAAGCATGGTGCAGGGGTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCg                                                                                                                                          >  1:204153/1‑149 (MQ=255)
       tttCTCAAGCATGGTGTAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACgc                                                                                                                                   >  4:235092/1‑149 (MQ=255)
           tcAAGCATGGTGCAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACgctgct                                                                                                                               >  8:186328/1‑149 (MQ=255)
           tcAAGCATGGTGCAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACgctgct                                                                                                                               >  4:116499/1‑149 (MQ=255)
           tcAAGCATGGTGCAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACgctgct                                                                                                                               >  4:321620/1‑149 (MQ=255)
             aaGCATGGTGCAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACgctgct                                                                                                                               <  2:204153/147‑1 (MQ=255)
             aaGCATGGTGCAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACgctgc                                                                                                                                <  6:107453/146‑1 (MQ=255)
             aaGCATGGTGCAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGctgctg                                                                                                                              >  7:24314/1‑148 (MQ=255)
              aGCATGGTGCAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGaa                                                                                                                            <  8:17607/149‑1 (MQ=255)
                    gTGCAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGc                                                                                                                       <  3:99704/148‑1 (MQ=255)
                    gTGCAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGc                                                                                                                       <  8:24314/148‑1 (MQ=255)
                       cAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGa                                                                                                                   >  1:271293/1‑149 (MQ=255)
                          ggCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCTGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACgct                                                                                                                                  >  8:316967/1‑131 (MQ=255)
                          ggCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACgct                                                                                                                                  <  7:316967/131‑1 (MQ=255)
                          ggCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGa                                                                                                                >  2:291273/1‑149 (MQ=255)
                           gCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGAc                                                                                                               <  8:236591/149‑1 (MQ=255)
                               cAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGAc                                                                                                               <  5:273321/145‑1 (MQ=255)
                               cAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGAc                                                                                                               >  6:273321/1‑145 (MQ=255)
                               cAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCa                                                                                                             <  3:235092/147‑1 (MQ=255)
                                    ggggtaggggtaAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGAt                                                                                                      >  4:267092/1‑149 (MQ=255)
                                    ggggtaggggtaAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGAt                                                                                                      <  1:280994/149‑1 (MQ=255)
                                     gggtaggggtaAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATg                                                                                                     <  3:116499/149‑1 (MQ=255)
                                       gtaggggtaAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGaa                                                                                                   <  2:271293/149‑1 (MQ=255)
                                         aggggtaAAGCGGTAATCCGAGCCAGGATGCTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCATTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACAAGCTCGATGAAGt                                                                                                 >  4:153034/1‑149 (MQ=255)
                                           gggtaAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGCGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTcc                                                                                               <  3:36036/149‑1 (MQ=255)
                                            ggtaAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCt                                                                                              <  5:78394/149‑1 (MQ=255)
                                            ggtaAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCCTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCt                                                                                              >  7:176073/1‑149 (MQ=255)
                                            ggtaAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCCTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCt                                                                                              >  7:181225/1‑149 (MQ=255)
                                             gtaAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTc                                                                                             >  3:68917/1‑149 (MQ=255)
                                                aaGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGaa                                                                                          <  3:267092/149‑1 (MQ=255)
                                                  gCGGTAAGGCTAGCCAGGATGGGCGGCTGGTATGTGCGGGTGGTCGGCCTGGAACTGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACTCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGa                                                                                           <  4:193903/146‑1 (MQ=255)
                                                  gCGGTAAGCCGAGCCAGGATGGTCGGCGGGAAAGTGCGGGAGGTCGCCCTGGAACAGTTTTTCGCGCAGGGAGACTTCGGAGAAGGCAGTCATGTAGCGGCCACGCTGCTGAAGTTGCCGGATGACCAGCTCGATGAAGTCCACGaaa                                                                                         >  3:193903/1‑147 (MQ=255)
                                                    ggTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGa                                                                                                                             <  7:116834/110‑1 (MQ=255)
                                                    ggTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGa                                                                                                                             >  8:116834/1‑110 (MQ=255)
                                                     gTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGctct                                                                                     >  1:142063/1‑149 (MQ=255)
                                                      tAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCtctc                                                                                    >  2:146501/1‑149 (MQ=255)
                                                         gCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCCTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCgg                                                                                 <  8:181225/149‑1 (MQ=255)
                                                         gCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCCTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCgg                                                                                 <  8:176073/149‑1 (MQ=255)
                                                           cGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCgggg                                                                               >  8:286460/1‑149 (MQ=255)
                                                           cGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCgggg                                                                               >  8:291513/1‑149 (MQ=255)
                                                           cGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCgggg                                                                               <  7:186328/149‑1 (MQ=255)
                                                             aGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTg                                                                                                                                               >  4:151527/1‑83 (MQ=255)
                                                             aGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTg                                                                                                                                               <  3:151527/83‑1 (MQ=255)
                                                              gCCAGGATTGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGa                                                                            <  1:31263/149‑1 (MQ=255)
                                                               cctgttgggTGGGGGGGTATGTGGGGGTGGTGGGCTTGTACCGCATTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGa                                                                            <  1:298250/141‑1 (MQ=255)
                                                               ccAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCTCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGa                                                                            <  1:291273/148‑1 (MQ=255)
                                                                   gATGGTCGGCGGGTAAGTGCGGGTGGTCTGCGTGGATCAGTTTTTCGCGCAGTGTTCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACTCTGCTGAAGTTGCGGGAt                                                                                                                  <  8:125926/106‑1 (MQ=255)
                                                                   gATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGATGCGGGAt                                                                                                                  >  7:125926/1‑106 (MQ=255)
                                                                       gTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCgg                                                                    <  7:286460/148‑1 (MQ=255)
                                                                       gTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCgg                                                                    <  7:291513/148‑1 (MQ=255)
                                                                        tCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGTAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGt                                                                  >  5:310705/1‑149 (MQ=255)
                                                                              ggTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGTAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGtt                                                            <  6:310705/149‑1 (MQ=255)
                                                                               gTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACACTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGtt                                                            >  8:235025/1‑148 (MQ=255)
                                                                                        ggggggcGGCCTGGAACAGTTTTTCGCGGAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGAGGACCAGCTCGATGAAGTCCTCGAAGCGCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGGcc                                                  <  1:257292/143‑1 (MQ=255)
                                                                                            gtCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGc                                              <  4:68917/149‑1 (MQ=255)
                                                                                                     gAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTc                                       <  3:321620/147‑1 (MQ=255)
                                                                                                       aCAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCg                                                                                                                      >  6:36305/1‑66 (MQ=255)
                                                                                                       aCAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCg                                                                                                                      <  5:36305/66‑1 (MQ=255)
                                                                                                          gTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATc                                >  1:270802/1‑149 (MQ=255)
                                                                                                           tttttCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCg                                                                                                                      <  6:106786/62‑1 (MQ=255)
                                                                                                           tttttCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCg                                                                                                                      >  5:106786/1‑62 (MQ=255)
                                                                                                           tttttCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGAcc                                                                                                              <  2:237227/70‑1 (MQ=255)
                                                                                                           tttttCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGAcc                                                                                                              >  1:237227/1‑70 (MQ=255)
                                                                                                            ttttCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCa                              >  2:341854/1‑149 (MQ=255)
                                                                                                                  cgcAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGAt                        >  7:270195/1‑149 (MQ=255)
                                                                                                                     aGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTTCTGAAGTTGCGGGATGACCAGCTCGAGCAAGCCCCCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGGCCTGGACGGTTTCaa                                     <  5:250710/133‑2 (MQ=255)
                                                                                                                      gggTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAAc                    <  1:341854/149‑1 (MQ=255)
                                                                                                                      gggTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAAc                    <  2:270802/149‑1 (MQ=255)
                                                                                                                       ggTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACt                   >  8:70021/1‑149 (MQ=255)
                                                                                                                            cTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCaa                     >  6:319983/1‑142 (MQ=255)
                                                                                                                            cTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCaa                     <  5:319983/142‑1 (MQ=255)
                                                                                                                                       gCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGtt    >  3:246166/1‑148 (MQ=255)
                                                                                                                                        cAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCa  <  1:146501/149‑1 (MQ=255)
                                                                                                                                         aGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGtt                                                            <  4:164928/90‑1 (MQ=255)
                                                                                                                                         aGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGtt                                                            >  3:164928/1‑90 (MQ=255)
                                                                                                                                             |                                                                                                                                               
GGAACAGTTTCTCAAGCATGGTGCAGGGCTCCAGTCGGGGTAGGGGTAAAGCGGTAAGCCGAGCCAGGATGGTCGGCGGGTAAGTGCGGGTGGTCGGCCTGGAACAGTTTTTCGCGCAGGGTGCCTTCGGTGTAGGCAGTCTTGTAGCGGCCACGCTGCTGAAGTTGCGGGATGACCAGCTCGATGAAGTCCTCGAAGCTCTCCGGGGTGACGGTGCGGGTCAGGTTGAAACCGTCCAGGCCGGTTTCATCGATCCACGCGATCAACTGCTCGGCCACCTGTTCA  >  NC_002947/274551‑274835

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: