| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,869,859 | C→A | 10.4% | E354* (GAG→TAG) ‡ | PP_3419 ← | sigma‑54 dependent transcriptional regulator/response regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,869,859 | 0 | C | A | 10.4% | 225.8 / 10.0 | 75 | E354* (GAG→TAG) ‡ | PP_3419 | sigma‑54 dependent transcriptional regulator/response regulator |
| Reads supporting (aligned to +/- strand): ref base C (34/33); new base A (4/4); total (38/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACGGCTCGTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAGGTCACGCCT > NC_002947/3869712‑3870006 | aCGGCTCGTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTGCAGCATGTTGCGCAATTCAGGCACATTGCCAGGCCAGCTATACCCGAGCAGCAGGCTTtcggcctcg > 6:31004/1‑149 (MQ=255) gTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGACCAGCAGGCTTTCGGCCGAGGCCGaaa < 5:228524/149‑1 (MQ=255) aaCCACGGTCATGCACAGGTGCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCGAGGCCGaaagcc < 5:208450/149‑4 (MQ=255) aaCCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCGAGGCCGaaagcc < 8:251972/149‑4 (MQ=255) aCCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGaaaa < 4:217317/146‑1 (MQ=255) aCCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGaaaa > 3:217317/1‑146 (MQ=255) aCCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAgcg > 2:268688/1‑149 (MQ=255) aGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAgg > 5:102853/1‑149 (MQ=255) tCATGCACATGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTc < 6:258312/149‑1 (MQ=255) tCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGTCTCGGCCGAAAAGCG‑CAGGTTc > 1:164499/1‑149 (MQ=255) acaGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTg > 1:247873/1‑149 (MQ=255) ttCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATa < 2:247873/149‑1 (MQ=255) cAACTGATGCGCTTTCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAg < 4:225245/132‑1 (MQ=255) cTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGcc > 7:133421/1‑149 (MQ=255) tGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCg > 1:147943/1‑149 (MQ=255) gATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCgg > 8:229914/1‑149 (MQ=255) gcTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTAtg > 4:144968/1‑149 (MQ=255) ttGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGATATAACCCAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑AAGGTTCGGCTTGCCATATAGCCCGCTAtggt > 6:10732/1‑149 (MQ=255) caccacCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGTCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTAtggtgg < 2:164499/148‑1 (MQ=255) caccTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGc < 2:347770/121‑1 (MQ=255) caccTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGc > 1:347770/1‑121 (MQ=255) accTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAg < 6:83351/149‑1 (MQ=255) tCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGc < 6:94963/139‑1 (MQ=255) tCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGc > 5:94963/1‑139 (MQ=255) tCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGc > 2:357948/1‑149 (MQ=255) tCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGc > 2:22555/1‑149 (MQ=255) ggCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTCGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCcg < 3:155365/149‑1 (MQ=255) gcCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCgcgc < 6:102853/149‑1 (MQ=255) gcCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGACaa < 3:294764/136‑1 (MQ=255) gcCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGACaa > 4:294764/1‑136 (MQ=255) ccAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCGCCAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCgcgc < 1:268688/149‑1 (MQ=255) cAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCgcgc > 1:67794/1‑147 (MQ=255) cAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCgcgc > 2:242271/1‑147 (MQ=255) cAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCAAGCTATAACAGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCAAAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCa > 3:91431/1‑149 (MQ=255) gCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGt < 1:357948/149‑1 (MQ=255) ggcTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGAt < 3:195993/147‑1 (MQ=255) cTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCa > 8:92127/1‑134 (MQ=255) cTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCa < 7:92127/134‑1 (MQ=255) cTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCt < 1:242271/149‑1 (MQ=255) tCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTg > 1:157100/1‑149 (MQ=255) cAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAgg > 1:331144/1‑139 (MQ=255) cAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAgg < 2:331144/139‑1 (MQ=255) cAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGc > 5:303273/1‑148 (MQ=255) gcgcAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGaa > 6:135851/1‑148 (MQ=255) gcgcAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGaa < 2:157100/148‑1 (MQ=255) cAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACa < 2:147943/149‑1 (MQ=255) aaTTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATAc < 6:327122/147‑1 (MQ=255) aaTTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGACGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGACCTGCCCACGCGAATACaa > 5:327122/1‑148 (MQ=255) aCGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGTTTGCCATAGCGCCGGCTATGGTGGGGAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGcc > 7:74963/1‑131 (MQ=255) aCGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGTTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGcc < 8:74963/131‑1 (MQ=255) cGCACATTGCCATGCCAGCTATAACCGAGCAGCAGGCTTTCGTCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCTCCGGCTATTGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCgg < 4:91431/149‑1 (MQ=255) gCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCaa < 1:14221/96‑1 (MQ=255) gCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCaa > 2:14221/1‑96 (MQ=255) acaTTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCAc > 4:312974/1‑149 (MQ=255) acaTTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCAc > 8:137927/1‑149 (MQ=255) ccaggccagCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAg > 3:240839/1‑104 (MQ=255) ccaggccagCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAg < 4:240839/104‑1 (MQ=255) ccaggccagCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAg > 3:22101/1‑149 (MQ=255) aggccagCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAggg < 2:67794/149‑1 (MQ=255) ccagCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAg > 4:6040/1‑144 (MQ=255) ccagCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAg < 3:6040/144‑1 (MQ=255) cagCTATAACCGAGCAGTAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAgg < 6:343118/105‑1 (MQ=255) cagCTATAACCGAGCAGTAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAgg > 5:343118/1‑105 (MQ=255) agCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGAt > 4:59324/1‑148 (MQ=255) taACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATg < 7:229914/147‑1 (MQ=255) taACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGc > 2:120490/1‑148 (MQ=255) ccGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAg < 6:303273/149‑1 (MQ=255) gAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGc < 3:312974/149‑1 (MQ=255) cagcagGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGga < 1:22555/149‑1 (MQ=255) agcagGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGgaa < 5:10732/149‑1 (MQ=255) tgcgcttttCGGCCGAGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAggg < 6:10191/123‑1 (MQ=255) tgcgcttttCGGCCGAGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAggg > 5:10191/7‑129 (MQ=255) tgcgcttttCGGCCGAGGCCG‑AAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGgaag > 2:92197/7‑148 (MQ=255) ggCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAAc < 5:31004/149‑1 (MQ=255) ttttCGGCCGAGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAg > 5:207904/2‑149 (MQ=255) ttttCGGCCGAGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCAACGCGAATACAGGCGCGACACCTTCAGGGCGATAATGAGAAGCACCAAGAACAg > 5:341118/2‑149 (MQ=255) cggcctcggccGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCg < 3:152260/136‑1 (MQ=255) cggcctcggccGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCg > 4:152260/1‑136 (MQ=255) ggcctcggccGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAGGTCa < 3:144968/148‑1 (MQ=255) cctcggccGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAGGTCACGc < 4:22101/149‑1 (MQ=255) cctcggccGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAGGTCACGc < 3:59324/149‑1 (MQ=255) ctcggccGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAgg < 4:25098/115‑1 (MQ=255) ctcggccGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAgg > 3:25098/1‑115 (MQ=255) tcggccGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCgg < 4:257343/132‑1 (MQ=255) tcggccGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCgg > 3:257343/1‑132 (MQ=255) tcggccGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAGGTCACGCCt > 7:18608/1‑149 (MQ=255) | ACGGCTCGTCAACCAAGGTCATGCACAGGTTCAACTGATGCGCTTGCACCACCTCGTTCGGCGCCAGCAACACCGTCTGCTCCAGCATGTTGCGCAATTCACGCACATTGCCAGGCCAGCTATAACCGAGCAGCAGGCTTTCGGCCTCGGCCGAAAAGCG‑CAGGTTCGGCTTGCCATAGCGCCGGCTATGGTGGGCAAGGAAATGCCGCGCCAGTAGCAGGATGTCCTGCCCACGCGAATACAGGCGCGGCACCTTCAGGGCGATAATGCGAAGGCGGAAGAACAGGTCACGCCT > NC_002947/3869712‑3870006 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |