Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,027,751 T→A 6.4% I227F (ATC→TTC)  PP_3552 ← two‑component system sensor histidine kinase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,027,7510TA 6.4% 185.9 / 2.5 62I227F (ATC→TTC) PP_3552two‑component system sensor histidine kinase
Reads supporting (aligned to +/- strand):  ref base T (30/28);  new base A (2/2);  total (32/30)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.64e-01

TTCCAGGCCCTGCAGGTAACGCTGACTGGCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGG  >  NC_002947/4027605‑4027899
                                                                                                                                                   |                                                                                                                                                    
ttCCAGGCCCTGCAGGTAACGCTGACTGGCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATgc                                                                                                                                                    <  4:40820/149‑1 (MQ=255)
        ccTGCAGGTAACGCTGACTGGCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCATCGAAGCGCaggaaa                                                                                                                                            <  1:344372/149‑6 (MQ=255)
            cAGGTAACGCTGACTGGCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATg                                                                                                                                         <  3:113228/148‑1 (MQ=255)
                  aCGCGGACTGGCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCggg                                                                                                                                  <  3:31933/149‑1 (MQ=255)
                            gCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGac                                                                                                                        >  8:153680/1‑149 (MQ=255)
                                  gCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTc                                                                                                                  >  6:57291/1‑149 (MQ=255)
                                    aTAGTTGACACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTccac                                                                                                               <  5:221048/149‑1 (MQ=255)
                                     tAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTc                                                                                                                  <  7:277638/146‑1 (MQ=255)
                                     tAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTc                                                                                                                  >  8:277638/1‑146 (MQ=255)
                                       gTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTccacca                                                                                                             >  7:66043/1‑149 (MQ=255)
                                        ttGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCcaccac                                                                                                            >  7:106347/1‑149 (MQ=255)
                                               ccGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTccacc                                                                                                              >  7:173146/1‑140 (MQ=255)
                                               ccGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTccacc                                                                                                              <  8:173146/140‑1 (MQ=255)
                                                       aGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGt                                                                                             >  2:265926/1‑149 (MQ=255)
                                                           gCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCTAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCa                                                                                         >  5:118694/1‑149 (MQ=255)
                                                             tgattgatCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACg                                                                                       >  2:275248/1‑149 (MQ=255)
                                                               attgatCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGa                                                                                     >  2:169005/1‑149 (MQ=255)
                                                               attgatCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGa                                                                                     <  1:169005/149‑1 (MQ=255)
                                                                      tcGTGGGCGATGCCCGAGCCCAGCTCGCCCAGCGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATACGCAACGTGATGTCGAGGGACACGCTGACAACCTCCACCACCTCACCGCTGTAGATCTAACTGATCGACCg                                                                              >  8:31869/1‑149 (MQ=255)
                                                                        gTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGcc                                                                                <  1:179391/145‑1 (MQ=255)
                                                                        gTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGc                                                                            >  3:134341/1‑149 (MQ=255)
                                                                        gTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGc                                                                            >  8:315722/1‑149 (MQ=255)
                                                                          gggCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGAGCTTCGATGCGCAAGGTGATGTCGCGGGACACGATTACCACCGCACCCACCGCACCGGGGTAGGTCTCACGGCTAGCCCGGCTg                                                                          >  3:295381/1‑149 (MQ=255)
                                                                           ggCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTg                                                                          <  1:265926/148‑1 (MQ=255)
                                                                             cGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGc                                                                        >  2:155228/1‑148 (MQ=255)
                                                                                  cccGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCAGCCGGGCGAtccg                                                                  <  7:153680/149‑4 (MQ=255)
                                                                                   ccGAGGCCAGCTCGCCTAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCAGCCGGGCGAtccgt                                                                 <  6:118694/149‑5 (MQ=255)
                                                                                   ccGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCg                                                                 <  1:275248/149‑1 (MQ=255)
                                                                                      aGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAAc                                                              <  5:57291/149‑1 (MQ=255)
                                                                                        gCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAAcc                                                             >  6:168712/1‑148 (MQ=255)
                                                                                          cAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTa                                                                                                >  5:45855/1‑111 (MQ=255)
                                                                                          cAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTa                                                                                                <  6:45855/111‑1 (MQ=255)
                                                                                             cTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGt                                                       <  5:168712/149‑1 (MQ=255)
                                                                                                  ccAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACTGATCGCCCGCAATGAGATATCTAACCAACGTTAGcct                                                  >  6:50494/1‑149 (MQ=255)
                                                                                                    aGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGcctcc                                                >  1:12355/1‑149 (MQ=255)
                                                                                                    aGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGcctc                                                 >  3:72963/1‑148 (MQ=255)
                                                                                                    aGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGcctc                                                 <  4:72963/148‑1 (MQ=255)
                                                                                                    aGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGcctc                                                 <  2:59195/148‑1 (MQ=255)
                                                                                                    aGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCACCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGcctc                                                 >  1:59195/1‑148 (MQ=255)
                                                                                                          gCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCg                                                                              <  4:224244/113‑1 (MQ=255)
                                                                                                          gCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCg                                                                              >  3:224244/1‑113 (MQ=255)
                                                                                                           cGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTccacc                                                                                                              <  4:245905/80‑1 (MQ=255)
                                                                                                           cGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTccacc                                                                                                              >  3:245905/1‑80 (MQ=255)
                                                                                                            gAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCt                                        <  8:66043/149‑1 (MQ=255)
                                                                                                             aGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGtct                                                                                           >  7:305060/1‑97 (MQ=255)
                                                                                                             aGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGtct                                                                                           <  8:305060/97‑1 (MQ=255)
                                                                                                                 gggCACTGTGCGCCAGGCTTTCCTGCGCTTCGGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTg                                       >  1:219281/1‑146 (MQ=255)
                                                                                                                 gggCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTg                                       <  2:219281/145‑1 (MQ=255)
                                                                                                                     agtgtgCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTAccc                               <  7:31869/147‑1 (MQ=255)
                                                                                                                       tgtgCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCgg                             >  5:279610/1‑149 (MQ=255)
                                                                                                                           cgcCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCCCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAgg                         >  4:26028/1‑149 (MQ=255)
                                                                                                                                 gCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAgg                         <  4:122411/143‑1 (MQ=255)
                                                                                                                                 gCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAgg                         >  3:122411/1‑143 (MQ=255)
                                                                                                                                     ccttGCGCATCGAAGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGtgtg               >  2:54222/4‑149 (MQ=255)
                                                                                                                                      cttGCGCATCGAAGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCACACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGtgtg               <  2:309495/146‑1 (MQ=255)
                                                                                                                                      cttGCGCATCGAAGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCACACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGtgtg               >  1:309495/3‑148 (MQ=255)
                                                                                                                                      ccTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGtgtg               <  2:283704/148‑1 (MQ=255)
                                                                                                                                       cTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGt             <  4:134341/149‑1 (MQ=255)
                                                                                                                                             ttCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATc                    <  3:338288/136‑1 (MQ=255)
                                                                                                                                             ttCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGATCTCACTGATCGCCCTAAAATAAAAAAAAAAACAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATc                    >  4:338288/1‑136 (MQ=255)
                                                                                                                                                  aTGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAg                          >  3:82356/1‑126 (MQ=255)
                                                                                                                                                  aTGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAg                          <  4:82356/126‑1 (MQ=255)
                                                                                                                                                   tGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTgg  <  8:106347/149‑1 (MQ=255)
                                                                                                                                                   tGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTgg  <  1:237239/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
TTCCAGGCCCTGCAGGTAACGCTGACTGGCGTTGGCATAGTTGACCACCGCGGCCAGTGGCTGATTGATCTCGTGGGCGATGCCCGAGGCCAGCTCGCCCAGGGTAGCGAGGCGGGCACTGTGCGCCAGGCTTTCCTGCGCTTCGATGCGCAAGGTGATGTCGCGGGACACGCTGACCACCTCCACCACCGCACCGGTGTAGGTCTCACGGATCGCCCGGCTGGCGATTTCGAACCAACGGTAGCCTCCTGTCGCCTGGCGTACCCGGCAGGTCATCGTGTGGTAGCCGTCCTGG  >  NC_002947/4027605‑4027899

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: