Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,096,649 T→G 10.4% S86A (TCG→GCG) ‡ PP_5608 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,096,6490TG10.4% 187.8 / 6.2 64S86A (TCG→GCG) ‡PP_5608hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (33/24);  new base G (2/5);  total (35/29)
Fisher's exact test for biased strand distribution p-value = 2.30e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGCGCAGATAGCCGCCGAGGCCCAACAGGCCAAGCTTTCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGGCCTGCCTTGAAGCGATCTT  >  NC_002947/4096501‑4096792
                                                                                                                                                    |                                                                                                                                               
cgcgcAGATAGCCGCCGAGGCCCAACAGGCCAAGCTTTCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCt                                                                                                                                                 >  2:283918/1‑149 (MQ=255)
  cgcAGATAGCCGCCGAGGCCCAACAGGCCAAGCTTTCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTcg                                                                                                                                               >  3:296971/1‑149 (MQ=255)
        tAGCCGCCGAGGCCCAACAGGCCAAGCTTTCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCGAGCGGCtg                                                                                                                                         <  2:177329/149‑2 (MQ=255)
          gccgccGAGGCCCAACAGGCCAAGCTTTCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCGAGCGGCtgtt                                                                                                                                       <  2:63423/149‑4 (MQ=255)
          gccgccGAGGCCCAACAGGCCAAGCTTTCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCGAGCGGCtgt                                                                                                                                        <  8:112985/148‑3 (MQ=255)
          gccgccGAGGCCCAACACCCCAAGCTCTCCGGCGGAACCCTGTACGCCACGCGCAACAAGCTGCCGGTACGCACATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCaa                                                                                                                                       <  8:91939/149‑1 (MQ=255)
                   gCCCAACAGGCCAAGCTTTCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCGAGCGGCtgttgt                                                                                                                                     >  1:252535/1‑137 (MQ=255)
                   gCCCAACAGGCCAAGCTTTCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCGAGCGGCtgttgt                                                                                                                                     <  2:252535/142‑6 (MQ=255)
                     ccAACAGGCCAAGCTTTCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTc                                                                                                                                         <  4:134083/136‑1 (MQ=255)
                     ccAACAGGCCAAGCTTTCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTc                                                                                                                                         >  3:134083/1‑136 (MQ=255)
                       caCAGGCCAATCTTTCCGGGGGAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATc                                                                                                                          <  8:33413/148‑1 (MQ=255)
                            gCCAAGCTTTCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAg                                                                                                                       >  5:358874/1‑147 (MQ=255)
                                   tttCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTAc                                                                                                              >  6:284028/1‑149 (MQ=255)
                                     tCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACtt                                                                                                            >  5:352379/1‑149 (MQ=255)
                                        ggggTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTc                                                                                                           >  3:268476/1‑147 (MQ=255)
                                         gggTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAg                                                                                                        <  5:95890/149‑1 (MQ=255)
                                                  tGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGtt                                                                                               >  5:303982/1‑149 (MQ=255)
                                                    tACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTAc                                                                                                              >  8:221167/1‑132 (MQ=255)
                                                    tACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTAc                                                                                                              <  7:221167/132‑1 (MQ=255)
                                                        ccACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTATAACAGCCGCTCGCGGCTCAAGc                                                                                                                                     <  6:333330/105‑1 (MQ=255)
                                                         cACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTa                                                                                                               >  5:38642/1‑126 (MQ=255)
                                                          aCGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGt                                                                                                                >  5:51722/1‑124 (MQ=255)
                                                          aCGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGt                                                                                                                <  6:51722/124‑1 (MQ=255)
                                                               cAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCg                                                                                                 >  7:71686/1‑134 (MQ=255)
                                                               cAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCg                                                                                                 <  8:71686/134‑1 (MQ=255)
                                                                aagaagCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTc                                                                                                           >  7:60201/1‑123 (MQ=255)
                                                                aagaagCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTc                                                                                                           <  8:60201/123‑1 (MQ=255)
                                                                         cAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGAt                                                                         >  4:64352/1‑148 (MQ=255)
                                                                         cAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGAt                                                                         <  5:284028/148‑1 (MQ=255)
                                                                              aCGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAg                                                                                                        >  8:170422/1‑112 (MQ=255)
                                                                              aCGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCAAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAActct                                                                   >  1:83971/1‑149 (MQ=255)
                                                                                gCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCtt                                                                  >  3:143779/1‑148 (MQ=255)
                                                                                gCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCtt                                                                  >  7:65355/1‑148 (MQ=255)
                                                                                 cAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTa                                                                <  4:296971/149‑1 (MQ=255)
                                                                                    aTTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGAt                                                                         <  4:27449/137‑1 (MQ=255)
                                                                                    aTTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGAt                                                                         >  3:27449/1‑137 (MQ=255)
                                                                                        cccAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCa                                                         <  6:303982/149‑1 (MQ=255)
                                                                                        cccAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCa                                                         >  7:203130/1‑149 (MQ=255)
                                                                                              cccTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTg                                                   <  6:358874/149‑1 (MQ=255)
                                                                                              cccTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTg                                                   <  3:308866/149‑1 (MQ=255)
                                                                                                                 ccTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATg                                                                                        >  1:266431/1‑93 (MQ=255)
                                                                                                                 ccTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATg                                                                                        <  2:266431/93‑1 (MQ=255)
                                                                                                                  cTTCGGCATTACCGGGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGtct                               >  7:305045/1‑149 (MQ=255)
                                                                                                                     cGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGAAGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCa                            >  2:221019/1‑149 (MQ=255)
                                                                                                                             ccGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGgc                    >  2:276432/1‑149 (MQ=255)
                                                                                                                              cGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGgcc                   <  1:276432/149‑1 (MQ=255)
                                                                                                                              cGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGgcc                   >  7:329895/1‑149 (MQ=255)
                                                                                                                                aGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGgcctg                 >  1:279757/1‑149 (MQ=255)
                                                                                                                                   aaaCCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGgcctgcct              <  4:268476/149‑1 (MQ=255)
                                                                                                                                    aaCCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGGCCTGCCtt             <  8:65355/149‑1 (MQ=255)
                                                                                                                                    aaCCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGGCCTGCCtt             <  2:83971/149‑1 (MQ=255)
                                                                                                                                       cTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAAGTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGGGTGTCCATGGAGGGGCTGCCTTGaa          <  4:143779/149‑1 (MQ=255)
                                                                                                                                       cTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGgcctggctgg            >  8:47308/1‑145 (MQ=255)
                                                                                                                                       cTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGGCCTGCCTTg            <  6:75698/147‑1 (MQ=255)
                                                                                                                                       cTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGGCCTGCCTTGaa          >  5:75698/1‑149 (MQ=255)
                                                                                                                                          cttgaGCCGCGAGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGGCCTGCCTTGAAGc        >  5:223181/5‑148 (MQ=255)
                                                                                                                                          cttgaGCCGCGAGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGGCCTGCCTTGAAGCg       <  6:223181/145‑1 (MQ=255)
                                                                                                                                          caacaGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGGCCTGCCTTGAAGc        >  6:147612/1‑148 (MQ=255)
                                                                                                                                           aacaGCCGCTCGCGGCTCAAGCCAGCAGCCATCAAGCAGACGTAATTCGAGCAGTGCGTTCAGCATGCCGATCCAAGACGATAACTATTTACTTATCACGCCTGCAAAGGCCCCATCAGCCTCTCCATGGAGCGCCTGCCTTGAAGcca      >  5:114816/1‑147 (MQ=255)
                                                                                                                                              aGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGGCCTGCCTTGAAGCGATCt   >  4:58228/1‑149 (MQ=255)
                                                                                                                                               gCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGGCCTGCCTTGAAGCGATCtt  >  5:245179/1‑149 (MQ=255)
                                                                                                                                                  gCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGc                                   <  4:16334/113‑1 (MQ=255)
                                                                                                                                                  gCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGc                                   <  4:11492/113‑1 (MQ=255)
                                                                                                                                                  gCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGc                                   >  3:16334/1‑113 (MQ=255)
                                                                                                                                                  gCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGc                                   >  3:11492/1‑113 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
CGCGCAGATAGCCGCCGAGGCCCAACAGGCCAAGCTTTCCGGGGTAACCCTGTACGCCACGCGCAAGAAGCTGCAGGTACGCAAATTCCCCAAACCCTGGATGCGCATGACTGCCTTCGGCATTACCGAGCAAACCTACAACAGCCGCTCGCGGCTCAAGCCAGCAGCGATCAAGCAGACGTACTTCGAGCAGTGCGTTCAGCATGCCGTTGCAAGACGATAACTCTTTACTTATCACGCCTGCAAAGGCCGCATCAGCGTCTCCATGGAGGGCCTGCCTTGAAGCGATCTT  >  NC_002947/4096501‑4096792

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑