| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,228,395 | T→A | 7.8% | intergenic (‑139/+397) | PP_5624 ← / ← PP_3707 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,228,395 | 0 | T | A | 7.8% | 215.3 / 6.3 | 76 | intergenic (‑139/+397) | PP_5624/PP_3707 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (36/34); new base A (2/4); total (38/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCACATGTTGAGCTCAGATGAATAGGAGCCAGGGATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCGCTCGGCTCGTCTTGCCTTAGC > NC_002947/4228251‑4228541 | ccacATGTTGAGCTCAGATGAATAGGAGCCAGGGATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGc > 3:198399/1‑149 (MQ=255) acaTGTTGAGCTCAGATGAATAGGAGCCAGGTATAATATCCTCCACTGTCCTTGGAGTGGCGAACATAGAAAGGTAATGTGATTTGCACAACTAGTTTTCTATTGCACCCAAGCTGGCGTCACCTATGCCGGCACGTCTCGTTATgat > 3:224921/1‑146 (MQ=255) caTGTGGAGCTCAGATGAATAGGAGCCAGGGATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCATAACGCGAc < 8:293766/149‑1 (MQ=255) aTGTTGAGCTCAGATGAATAGGAGCCAGGGATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGAc > 8:291892/1‑148 (MQ=255) gTTGAGCTCAGTTGATTAGGAGGCAGGGATACTATCCTCCCCTTTCCTTGGTGTGGCGAACGTATAAAGGGACTGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGGGTCTCCTATGCCGGCACGTCGCTTTACGCGAcgt < 2:262116/148‑3 (MQ=255) ttGAGCTCAGATGAATAGGAGCCAGGGATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACaaa < 4:301114/148‑1 (MQ=255) ttGAGCTCAGATGAATAGGAGCCAGGGATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCATAACGCGAcgtgc < 6:256462/149‑5 (MQ=255) gATGAATAGGAGCCAGGGATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTcgacga < 4:150565/149‑1 (MQ=255) gAATAGGAGCCAGGGATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCAGGCACGTCGCGATATGCGACAAAGCCTCGACGATAc > 2:298884/1‑149 (MQ=255) aaTAGGAGCCAGGGATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCACCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATAc > 3:334447/1‑148 (MQ=255) tAGGAGCCAGGGATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCAt > 8:144245/1‑149 (MQ=255) ggATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGTTTTGCCCAACGAGTATTATAGTGCTCCCAAGCTGGCGTATCATATCCCGGCACGTCGCGTTATGCGACAAAGCCTCGACAAAACCATTAGGCCATCa > 4:272402/1‑149 (MQ=255) gATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCAc > 4:19397/1‑149 (MQ=255) aTACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCAcc < 7:144245/149‑1 (MQ=255) tACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACTAGTTTTATAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCt < 4:198399/149‑1 (MQ=255) tACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCt < 7:291892/149‑1 (MQ=255) tATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTgg > 8:45128/1‑149 (MQ=255) tccCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAAt > 3:147331/1‑149 (MQ=255) ccTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGa < 7:45128/149‑1 (MQ=255) ccTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGa > 3:28298/1‑149 (MQ=255) cTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATgg > 1:234356/1‑149 (MQ=255) cTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATg < 3:261544/148‑1 (MQ=255) ggAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATggg < 2:234356/147‑1 (MQ=255) gAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATc > 7:54187/1‑149 (MQ=255) gAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATtct > 1:179623/1‑149 (MQ=255) gAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATtct > 7:130571/1‑149 (MQ=255) aaCCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATtctc < 3:310896/149‑1 (MQ=255) aCCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTcc > 4:25472/1‑149 (MQ=255) gAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGc > 3:30248/1‑87 (MQ=255) gAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGc < 4:30248/87‑1 (MQ=255) aaGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTg < 8:54187/149‑1 (MQ=255) ggTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGa < 1:156885/149‑1 (MQ=255) ggTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGa < 3:19397/149‑1 (MQ=255) ggTGATTTGCCCTACGAGTTTTCTAGTGCTCCCAATCTGGCGTCGCCTATGCCGGCACGTCGCGTTAAGCGACAAAGCCTCTACGATACGATTAGCCCATCACCTTCGTATATGGAGTTTGGGATCCGATTCTCCTGCCTTGGAGTGTc < 4:334447/149‑1 (MQ=255) ggTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAg < 6:290955/95‑1 (MQ=255) ggTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAg > 5:290955/1‑95 (MQ=255) ggTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTAATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTc < 6:309251/149‑1 (MQ=255) gTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCt < 3:25472/149‑1 (MQ=255) gCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAg < 8:130571/148‑1 (MQ=255) cccAACTAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGt < 4:115688/148‑1 (MQ=255) cAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGa > 7:110217/1‑148 (MQ=255) aaCGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATa > 4:253342/1‑149 (MQ=255) aCGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATAc < 3:253342/149‑1 (MQ=255) ttCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATa < 8:110217/148‑1 (MQ=255) tCTAGTGCTCCCAATCTGTCGTCTCCTATGCCGGCACGTCGCGTTATCCGACAAATCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTTGAGTGTCTGATCAGTTATACCAGATAg < 4:224921/148‑1 (MQ=255) tAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATa < 1:10591/145‑1 (MQ=255) tAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATa > 2:10591/1‑145 (MQ=255) tAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGc > 3:292092/1‑148 (MQ=255) tAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATAACAGATAGGc > 1:199392/1‑148 (MQ=255) gTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACTTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGc < 4:147331/146‑1 (MQ=255) gTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGcc < 6:146648/147‑1 (MQ=255) gTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGcc > 5:146648/1‑147 (MQ=255) gTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCAc > 6:24707/1‑149 (MQ=255) cTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATa < 1:259067/140‑1 (MQ=255) cTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATa > 2:259067/1‑140 (MQ=255) cccAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGa < 8:33083/122‑1 (MQ=255) cccAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGa > 7:33083/1‑122 (MQ=255) cccAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTAGGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGa < 4:28298/149‑1 (MQ=255) aaGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTc > 4:96900/1‑116 (MQ=255) aaGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTc < 3:96900/116‑1 (MQ=255) aGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACAtt > 8:102338/1‑149 (MQ=255) tcCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCgct > 4:319290/1‑149 (MQ=255) tcCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCgct > 6:75016/1‑149 (MQ=255) tGCCGGCACTTCGCTTTATTCTACAATGCCTCTACTTTACCATTTAGTCATCACCTTGGTAAATGGAGTATGGGATCTGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCgctcgg < 1:298884/147‑1 (MQ=255) ccGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCgctcggctcg > 7:221042/1‑149 (MQ=255) ccGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCgctcggctcg > 5:301663/1‑149 (MQ=255) cGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCGCTCGGCTCGt > 3:293127/1‑149 (MQ=255) cGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCGCTCGGCTCGt < 7:102338/149‑1 (MQ=255) ggCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCGCTCGGCTCGTc > 8:329299/1‑149 (MQ=255) tttgTCGCATAACGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAgt > 7:208143/4‑91 (MQ=255) tttgTCGCATAACGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAgt < 8:208143/88‑1 (MQ=255) tttgTCGCATAACGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCGCTCGGCTCGTCtt > 4:269698/4‑149 (MQ=255) cGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCGCTCGGCTCGTCTTGc < 6:301663/149‑1 (MQ=255) gcgTTATGCGACAAAGACTCGACGATACCATTAGGCAATCACCTTGGTAAATGGATTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCGCTCGGCTCGTCTTGCCTTa < 6:271404/149‑1 (MQ=255) gcgTTATGCGACAAACCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGAATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGAAATTTCAGTGAGCTCGGCTCGTCTTGCCt > 5:271404/1‑147 (MQ=255) gTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCGCTCGGCTCGTCTTGCCTTAGc < 2:179623/149‑1 (MQ=255) | CCACATGTTGAGCTCAGATGAATAGGAGCCAGGGATACTATCCTCCCCTGTCCTTGGAGTGGCGAACCTAGAAAGGTACGGTGATTTGCCCAACGAGTTTTCTAGTGCTCCCAAGCTGGCGTCTCCTATGCCGGCACGTCGCGTTATGCGACAAAGCCTCGACGATACCATTAGGCCATCACCTTGGTAAATGGAGTATGGGATCCGATTCTCCTGCCTTGGAGTGTCTGATCAGTGATACCAGATAGGCCACTACGACATTTCCGTGCGCTCGGCTCGTCTTGCCTTAGC > NC_002947/4228251‑4228541 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |