| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,252,217 | C→T | 8.2% | intergenic (‑185/+55) | PP_3726 ← / ← rocE | enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,252,217 | 0 | C | T | 8.2% | 247.4 / 7.7 | 85 | intergenic (‑185/+55) | PP_3726/rocE | enoyl‑CoA hydratase/isomerase family protein/amino acid permease RocE |
| Reads supporting (aligned to +/- strand): ref base C (45/33); new base T (4/3); total (49/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
CTTGATGAGGGAGATACTAAACGAGTGTTCAGCAAGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAGCACAGGGCAATGAAGCCAAAGC > NC_002947/4252069‑4252363 | cTTGATGAGGGAGATACTAAACGAGTGTTCAGCAAGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGAc < 1:354036/149‑1 (MQ=255) aCTAAACGAGTGTTCAGCAAGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGa > 4:249348/1‑148 (MQ=255) aCTAAACGAGTGTTCAGCAAGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGACCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGa > 2:234796/1‑148 (MQ=255) cTAAACGAGTGTTCAGCAAGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGaa > 7:160026/1‑148 (MQ=255) gCAAGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGGTCGAGCGCCGCCTACGCGGTGCGCGATCTcaca > 3:69579/1‑124 (MQ=37) gCAAGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGGTCGAGCGCCGCCTACGCGGTGCGCGATCTcaca < 4:69579/124‑1 (MQ=37) gCAAGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAaca > 6:28338/1‑149 (MQ=255) cAAGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAacac < 8:160026/149‑1 (MQ=255) cAAGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAacac < 5:28338/149‑1 (MQ=255) aGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCt > 7:88385/1‑149 (MQ=255) aGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCt > 5:6908/1‑149 (MQ=255) ggATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCcg > 1:44203/1‑148 (MQ=255) ggATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCcg < 2:44203/148‑1 (MQ=255) aTGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCcgac > 2:73325/1‑148 (MQ=255) ggCTGTTACAACTTCGCACAACTGGGTGGCCGGCGTTACACAAGGGCGTTCGTCATTACGGCTTTATGTCCTGTGATATCGCGCACCGCGTAGGCGGCGCTCGTCCTCACAGGTCGCTGAAAATGCAGCGACCAACACCTGCcgacgac < 1:234796/149‑1 (MQ=255) gCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCcgacgacga > 2:76442/1‑149 (MQ=255) cTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAg > 4:343056/1‑149 (MQ=255) ttACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATg < 4:110799/119‑1 (MQ=255) ttACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGAGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATg > 3:110799/1‑119 (MQ=255) aCAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGAGCGCCGCCTACGCGGTGCGCGATCTCACAgg > 6:247154/1‑106 (MQ=25) aCAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGAGCGCCGCCTACGCGGTGCGCGATCTCACAgg < 5:247154/106‑1 (MQ=25) aaCTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGTGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTgcggc > 3:317321/1‑149 (MQ=255) ttCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGt > 1:138355/1‑148 (MQ=255) gCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGTCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCaaa < 6:259221/149‑1 (MQ=255) acaACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAAcc > 7:223748/1‑149 (MQ=255) acaACTCGGTGTCTGGCGTTACACAAGGGCGTTCCTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTCCCGACGACGAGCTGCGGCGTCAAAcc > 6:326769/1‑149 (MQ=255) aCTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCt < 1:73325/149‑1 (MQ=255) tCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTgg > 6:14001/1‑149 (MQ=255) tCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTgg > 1:71577/1‑149 (MQ=255) tCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTgg > 1:206618/1‑149 (MQ=255) ggTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGTGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGgt < 4:317321/148‑1 (MQ=255) tgtCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGtgtg < 3:249348/149‑1 (MQ=255) tCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGc < 2:206618/148‑1 (MQ=255) tGGTGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTg > 5:84444/1‑140 (MQ=255) tGGTGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTg < 6:84444/140‑1 (MQ=255) tGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTgg > 3:231070/1‑149 (MQ=255) gCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGt > 4:56905/1‑149 (MQ=255) gCGTTACAAAATGGAGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCTCACCGCGTAGGCGGCGCTAGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTgg < 8:223748/147‑1 (MQ=255) cGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CTCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTg < 1:76442/149‑1 (MQ=255) cGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTg < 2:71577/149‑1 (MQ=255) ttACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCt < 6:162966/142‑1 (MQ=255) ttACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCt > 5:162966/1‑142 (MQ=255) ttACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGc > 4:290817/1‑148 (MQ=255) acacAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTc > 3:93067/1‑124 (MQ=255) acacAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTc < 4:93067/124‑1 (MQ=255) acaAGGGCGTTCGTCATTACTGCTTTATGGCCTGTGAGATCGCGCACCTCGTAGGCGGCGCTCTACCTCACAGG‑CTCTGAAAATTCAGCGACCAACACCTGCCGACGACGTGCTGCTGCGTCAAACCGCTGGTGTGc < 7:142296/137‑1 (MQ=255) acaAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATAGCGCAACGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGAAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGc > 8:142296/1‑137 (MQ=255) aaGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTgcggc > 2:302214/1‑117 (MQ=255) aaGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGcc > 7:186815/1‑149 (MQ=255) aaGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGcc > 3:227721/1‑149 (MQ=255) ggCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGAACGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCACCGACCAACACCTGCCGACGACGAGCTGCGGCGACAAACCCCTGGTGTGCTCGGTGCGAAGGcccc > 4:274393/1‑148 (MQ=255) gCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCt > 6:233402/1‑149 (MQ=255) cGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTg > 1:153325/1‑149 (MQ=255) gTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGc < 5:326769/149‑1 (MQ=255) gTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCGCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGc < 7:258477/149‑1 (MQ=255) cATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGgtg > 1:307190/1‑120 (MQ=255) cATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGgtg < 2:307190/120‑1 (MQ=255) tGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGAcggcg > 2:243435/1‑149 (MQ=255) aCGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGt < 3:56905/149‑1 (MQ=255) ggCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAACCCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTg > 7:132046/1‑149 (MQ=255) ggCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTg > 1:17381/1‑149 (MQ=255) tATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACga < 5:14001/148‑1 (MQ=255) tGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACgaag < 3:290817/148‑1 (MQ=255) tGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACgaag > 5:328990/1‑148 (MQ=255) gCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGaagaag < 5:233402/149‑1 (MQ=255) tgtgAGGTCGAGCGCCGCCTACGCGGTGCGCGATCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCAGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTAc > 1:23071/1‑149 (MQ=37) gtCGAGCGCCGCCTACGCGGTGCGCGATCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCt > 2:205497/2‑117 (MQ=37) gtCGAGCGCCGCCTACGCGGTGCGCGATCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCt < 1:205497/116‑1 (MQ=37) tCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACgaa < 8:218804/135‑1 (MQ=255) tCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACgaa > 7:218804/1‑135 (MQ=255) cgcgCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGTTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCa > 5:261857/1‑147 (MQ=255) gcgcACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATa < 8:88385/148‑1 (MQ=255) gcgcACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATa < 8:186815/148‑1 (MQ=255) gcgcACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAg < 6:6908/149‑1 (MQ=255) cgcACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCACCACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGGTGACGAAGAAGTACGCCGCATAg > 5:37879/1‑148 (MQ=255) aCCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAGcaca < 3:18967/149‑1 (MQ=255) aCCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAGca > 4:18967/1‑147 (MQ=255) cgTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAGCACAGGGc > 1:128011/1‑149 (MQ=255) gcggcgCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAGCACAGGGCAATg > 6:125924/1‑148 (MQ=255) cggcgCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAGCACAGGGCAATGaa < 4:227721/149‑1 (MQ=255) ggcgCTCGTCCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAGCACAGGGCAATGAAg < 2:153325/149‑1 (MQ=255) ggcgCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAGCACAGGGCAATGAAg < 1:243435/149‑1 (MQ=255) cTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAGCACAGGGCAATGAAGCCa > 2:275561/1‑148 (MQ=255) tCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGCACGCCGCATAGCACAGGGCAATGAAGCCa > 4:66404/1‑147 (MQ=255) gACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAGCACAGGGCAATGAAGCCaaa < 6:328990/147‑1 (MQ=255) gACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAGCACAGGGCAATGAAGCCAAAGc > 7:87037/1‑149 (MQ=255) | CTTGATGAGGGAGATACTAAACGAGTGTTCAGCAAGGCGGGATGGGCTGTTACAACTTCGCACAACTCGGTGTCTGGCGTTACACAAGGGCGTTCGTCATGACGGCTTTATGGCCTGTGAGATCGCGCACCGCGTAGGCGGCGCTCGACCTCACAGG‑CGCTGAAAATGCAGCGACCAACACCTGCCGACGACGAGCTGCGGCGTCAAACCCCTGGTGTGCTGGGTGCGAAGGCCCCCTGCCGACGGCGGTTGACGAAGAAGTACGCCGCATAGCACAGGGCAATGAAGCCAAAGC > NC_002947/4252069‑4252363 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |