Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 4,742,249 G→A 6.5% A29V (GCA→GTA)  PP_4196 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029474,742,2490GA 6.5% 183.9 / 2.2 61A29V (GCA→GTA) PP_4196hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (28/29);  new base A (2/2);  total (30/31)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.63e-01

AGGTTGTCGACCATCTCGACTGGCAGGCTGAGGTCCAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAATGCCTATGCTCCCTGTTCCACAGGCGGC  >  NC_002947/4742102‑4742389
                                                                                                                                                     |                                                                                                                                            
aGGTTGTCGACCATCTCGACTGGCAGGCTGAGGTCCAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGc                                                                                                                                             >  5:146758/1‑149 (MQ=255)
  gTTGTCGACCATCTCGACTGGCAGGCTGAGGTCCAGATTTGTCTTGGGCAAGGGCTTGGGAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCg                                                                                                                                           <  3:322637/149‑1 (MQ=255)
                cGACTGGCAGGCTGAGGTCCAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAg                                                                                                                             >  3:165380/1‑149 (MQ=255)
                 gACTGGCAGGCTGAGGTCCAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGcc                                                                                                                                <  6:111788/145‑1 (MQ=255)
                      gCAGGCTGAGGTCCAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTACCGGt                                                                                                                                         >  6:283709/1‑131 (MQ=255)
                      gCAGGCTGAGGTCCAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTACCGGt                                                                                                                                         <  5:283709/131‑1 (MQ=255)
                      gCAGGCTGAGGTCCAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTAGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAggg                                                                                                                       <  1:86212/149‑1 (MQ=255)
                           cTGAGGTCCAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCGTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGgacgac                                                                                                                  <  2:233938/149‑1 (MQ=255)
                                 tCCAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTg                                                                                                                                              <  5:139238/115‑1 (MQ=255)
                                 tCCAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTg                                                                                                                                              >  6:139238/1‑115 (MQ=255)
                                   cAGATTTGTCTTTGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTTGTTGGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGgcagc                                                                                                          <  6:175197/149‑1 (MQ=255)
                                   cAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCgg                                                                                                               <  4:227981/144‑1 (MQ=255)
                                   cAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCgg                                                                                                               >  3:227981/1‑144 (MQ=255)
                                    aGATTTGTCCTGGGCAAGGGCTGGGCAACCGCTTTGCGGACCGGCTTGGGTGCAGGCTTGGCAGGCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTCGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGgcagc                                                                                                          <  1:69201/149‑1 (MQ=255)
                                        ttGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAAc                                                                                                     >  1:21722/1‑149 (MQ=255)
                                                      ggCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCacac                                                                                       <  4:165380/149‑1 (MQ=255)
                                                      ggCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCacac                                                                                       <  4:309750/149‑1 (MQ=255)
                                                        cTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGa                                                                                     <  6:146758/149‑1 (MQ=255)
                                                             cAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAgg                                                                                <  5:234864/149‑1 (MQ=255)
                                                              aaCCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTACCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGa                                                                               >  6:92503/1‑149 (MQ=255)
                                                                       gCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAg                                                                                                                             <  7:96229/94‑1 (MQ=255)
                                                                       gCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAg                                                                                                                             >  8:96229/1‑94 (MQ=255)
                                                                        cTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGAGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAagcagc                                                                      <  4:276605/148‑1 (MQ=255)
                                                                         tGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTATTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAgcg                                                                     >  1:228311/1‑149 (MQ=255)
                                                                           aCCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAgcg                                                                     >  6:208215/1‑146 (MQ=255)
                                                                           aCCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAgcg                                                                     <  5:208215/146‑1 (MQ=255)
                                                                            ccGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGaa                                                                 <  5:50259/149‑1 (MQ=255)
                                                                             cGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGc                                                               >  4:329848/1‑149 (MQ=255)
                                                                                  tgtgtgCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGtt                                                            >  5:188541/1‑148 (MQ=255)
                                                                                     gtgCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGATTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATg                                                        >  2:37843/1‑149 (MQ=255)
                                                                                        cAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGaa                                                                                              <  4:275326/108‑1 (MQ=255)
                                                                                        cAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGaa                                                                                              >  3:275326/1‑108 (MQ=255)
                                                                                             ttGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATg                                                 >  8:155044/1‑148 (MQ=255)
                                                                                                gCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAg                                                                                                                         >  5:179312/1‑73 (MQ=255)
                                                                                                gCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAg                                                                                                                         <  6:179312/73‑1 (MQ=255)
                                                                                                gCAGTCGCCTTTTTTGGCACGTGATTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACa                                             <  1:37843/149‑1 (MQ=255)
                                                                                                 cAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGa                                               >  1:345855/1‑146 (MQ=255)
                                                                                                   gTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGAc                                          >  5:265988/1‑149 (MQ=255)
                                                                                                      gCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTgg                                       >  4:76357/1‑149 (MQ=255)
                                                                                                        cTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGGACACGATCAGGACAAAGCAGCGCGAAGCGTTCAt                                                         >  6:86909/1‑129 (MQ=255)
                                                                                                        cTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGGACACGATCAGGACAAAGCAGCGCGAAGCGTTCAt                                                         <  5:86909/129‑1 (MQ=255)
                                                                                                        cTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTgg                                       >  4:32996/1‑147 (MQ=255)
                                                                                                         ttttttGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAg                                                                                             >  8:127185/1‑92 (MQ=255)
                                                                                                         ttttttGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAg                                                                                             <  7:127185/92‑1 (MQ=255)
                                                                                                         ttttttGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACa                                             <  8:241112/140‑1 (MQ=255)
                                                                                                         ttttttGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACa                                             >  7:241112/1‑140 (MQ=255)
                                                                                                               tGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGaaa                                <  2:228311/148‑1 (MQ=255)
                                                                                                                 gCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAAt                             <  2:21722/149‑1 (MQ=255)
                                                                                                                 gCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTACCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAAt                             <  5:92503/149‑1 (MQ=255)
                                                                                                                   aCGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAATGc                           <  3:32996/149‑1 (MQ=255)
                                                                                                                       gCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTAATGGCAAATGCACAGACTGTCAGGAAAAATGCCAAt                       >  4:226269/1‑149 (MQ=255)
                                                                                                                         ttACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGga                                                                                                                      >  6:273493/1‑52 (MQ=255)
                                                                                                                         ttACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGga                                                                                                                      <  5:273493/52‑1 (MQ=255)
                                                                                                                         ttACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACAAGATCAGGACAAAGCAGCGCCAAGCGTTCATGGCAAATGGACAGACTGCAAGGAAAAAAGCCTATg                      >  5:299440/1‑148 (MQ=255)
                                                                                                                            cccTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAATGCCTATGCTcc                  >  8:250083/1‑149 (MQ=255)
                                                                                                                             ccTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAATGCCTATGCTccc                 <  6:265988/149‑1 (MQ=255)
                                                                                                                                   cTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAATGCCTATGCTCCCTGTTc            >  5:336659/1‑148 (MQ=255)
                                                                                                                                     gTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAATGCCTATGCTCCCTGTTc            <  3:96978/146‑1 (MQ=255)
                                                                                                                                     gTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAATGCCTATGCTCCCTGTTc            >  4:96978/1‑146 (MQ=255)
                                                                                                                                           gCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGTCCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAATGCCTATGCTCCCTGTTCCACAggcgg   >  1:196983/1‑149 (MQ=255)
                                                                                                                                            ccTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAATGCCTATGCTCCCTGTTCCACAggcggc  <  3:329848/149‑1 (MQ=255)
                                                                                                                                                 gTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAATGCCTAt                       >  6:27436/1‑124 (MQ=255)
                                                                                                                                                 gTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAATGCCTAt                       <  5:27436/124‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                            
AGGTTGTCGACCATCTCGACTGGCAGGCTGAGGTCCAGATTTGTCTTGGGCAAGGGCTTGGCAACCGCTTTGCTGACCGGCTTGTGTGCAGGCTTGGCAGTCGCCTTTTTTGGCACGTGCTTACCCTGAGCTGTTTGAGCCTGGTTTGCCGGTTGCGCAGCCAAGGCAGGGACGACCGGGCAGCAGAACGTCAGAAGGCACACGATCAGGACAAAGCAGCGCGAAGCGTTCATGGCAAATGGACAGACTGGCAGGAAAAATGCCTATGCTCCCTGTTCCACAGGCGGC  >  NC_002947/4742102‑4742389

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: