Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,082,651 C→G 9.4% A539P (GCG→CCG)  alaS ← alanine‑‑tRNA ligase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,082,6510CG 9.4% 185.4 / 5.3 60A539P (GCG→CCG) alaSalanine‑‑tRNA ligase
Reads supporting (aligned to +/- strand):  ref base C (30/24);  new base G (2/4);  total (32/28)
Fisher's exact test for biased strand distribution p-value = 4.04e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

GCGAGCCCTTCTGCTGTACATGCTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAGAACGGCGTGCGGTCGAGCACC  >  NC_002947/5082510‑5082799
                                                                                                                                             |                                                                                                                                                    
gCGAGCCCTTCTGCTGTACATGCTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTg                                                                                                                                               >  4:55065/1‑149 (MQ=255)
  gAGCCCTTCTGCTGTACATGCTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGt                                                                                                                                             <  5:189737/149‑1 (MQ=255)
   aGCCCTTCTGCTGTACATGCTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGGTGCGCTGGtg                                                                                                                                            <  3:141988/149‑2 (MQ=255)
     cccTTCTGCTGTACATGCTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGGTGCGCTGGtgat                                                                                                                                          <  3:263089/149‑4 (MQ=255)
       cTTCTGCTGTACATGCTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTcacca                                                                                                                                        >  7:51095/1‑149 (MQ=255)
        ttCTGCTGTACATGCTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTcaccac                                                                                                                                       >  6:22717/1‑149 (MQ=255)
             ctgTACATGCTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCgt                                                                                                                                  <  5:169813/149‑1 (MQ=255)
             ctgTACATGCTCGCCCAGTACCTGGCGCAATGCATCGTGCAGCAGGTTGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCCTCCACCTTGGCCTCGACGGGCGAACCGATCACCAGCCCACCGCTGTTCACCACGCCgt                                                                                                                                  >  5:105251/1‑149 (MQ=255)
                tACATGCTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCgtg                                                                                                                                 <  7:250173/147‑1 (MQ=255)
                  cATGCTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCATGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGc                                                                                                                             <  6:352255/149‑1 (MQ=255)
                     gCTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAg                                                                                                                           >  4:105947/1‑148 (MQ=255)
                      cTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAgg                                                                                                                          >  7:297307/1‑148 (MQ=255)
                         gCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAgg                                                                                                                      <  5:22717/149‑1 (MQ=255)
                           ccAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCa                                                                                                                    >  3:281310/1‑149 (MQ=255)
                                 ccTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCAccgccg                                                                                                              <  7:122223/149‑1 (MQ=255)
                                   tGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGc                                                                                                                             >  1:293480/1‑132 (MQ=255)
                                   tGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGc                                                                                                                             <  2:293480/132‑1 (MQ=255)
                                     gcgcAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTc                                                                                                           <  3:55065/148‑1 (MQ=255)
                                       gcAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTtg                                                                                                        >  6:198757/1‑149 (MQ=255)
                                       gcAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTtg                                                                                                        >  4:1801/1‑149 (MQ=255)
                                             cTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCAc                                                                                                                   <  1:157806/132‑1 (MQ=255)
                                             cTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCAc                                                                                                                   >  2:157806/1‑132 (MQ=255)
                                                  tGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTcgcg                                                                                             >  3:324004/1‑149 (MQ=255)
                                                  tGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTcgcg                                                                                             <  5:198757/149‑1 (MQ=255)
                                                     agcagGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCAc                                                                                          >  6:337794/1‑149 (MQ=255)
                                                        agGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTc                                                                                       <  1:2001/149‑1 (MQ=255)
                                                          gTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCa                                                                                      >  7:14245/1‑148 (MQ=255)
                                                                          ttCAACGAGGTGGCGAGCTGTACGTCGCCATCGACCTTCCCCTCCACGGGCGAACCGATCACCAGCGCACCGCTGGACAACACGACGTCGACCAGGAAGGCACCCCCGGTCTTGCTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAga                                                                     >  4:343373/1‑148 (MQ=255)
                                                                             aaCGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTc                                                                                                                                            >  2:320665/1‑75 (MQ=255)
                                                                             aaCGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCt                                                                   <  8:297307/148‑1 (MQ=255)
                                                                             aaCGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCt                                                                   <  4:281310/148‑1 (MQ=255)
                                                                                gAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTgg                                                                                                                                              <  8:335534/70‑1 (MQ=255)
                                                                                gAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTgg                                                                                                                                              >  7:335534/1‑70 (MQ=255)
                                                                                gAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCAccgccg                                                                                                              >  1:271298/1‑102 (MQ=255)
                                                                                gAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCAccgccg                                                                                                              <  2:271298/102‑1 (MQ=255)
                                                                                gAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCaa                                                               <  3:1801/149‑1 (MQ=255)
                                                                                       cGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCg                                                        <  8:51095/149‑1 (MQ=255)
                                                                                              tACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATc                                                   <  5:337794/147‑1 (MQ=255)
                                                                                                 gTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATcaccca                                              >  7:112334/1‑149 (MQ=255)
                                                                                                     gCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTg                                                                               <  6:197988/112‑1 (MQ=255)
                                                                                                     gCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTg                                                                               >  5:197988/1‑112 (MQ=255)
                                                                                                     gCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTg                                          <  8:14245/149‑1 (MQ=255)
                                                                                                      cATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATcaccca                                              <  1:44993/144‑1 (MQ=255)
                                                                                                      cATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATcaccca                                              >  2:44993/1‑144 (MQ=255)
                                                                                                       aTCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGac                                        >  8:158823/1‑149 (MQ=255)
                                                                                                                 gCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTc                              >  6:142677/1‑149 (MQ=255)
                                                                                                                    tCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGc                           >  5:332306/1‑149 (MQ=255)
                                                                                                                        cGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAg                       <  4:324004/149‑1 (MQ=255)
                                                                                                                             gAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAGAACgg                  >  1:340770/1‑149 (MQ=255)
                                                                                                                               cgtggtgaCCAGCGGTGCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAGAACGGCg                >  6:170914/8‑149 (MQ=255)
                                                                                                                                ccGATCACCAGCGGACCGCTGGTCACCAGGCCGTGGTGCAGGAAGGCACCGCCGGTGTTGGTGGTGTCGAGCACGTCAAAGCGTGCTGCGCCAGCCTGCAAGAAGCCGGTATCACCCTCCTGACCACCGGACTCGGCGTAGAACGGCGt               <  3:343373/149‑1 (MQ=255)
                                                                                                                                    tgaCCAGCGGTGCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAGAACg                   <  2:126276/139‑1 (MQ=255)
                                                                                                                                    tgaCCAGCGGTGCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAGAACg                   >  1:126276/3‑141 (MQ=255)
                                                                                                                                      aCCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAGAACGGCGTGCGGTc         >  5:313500/1‑149 (MQ=255)
                                                                                                                                       ccAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGaccac                                     <  1:190617/120‑1 (MQ=255)
                                                                                                                                       ccAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGaccac                                     >  2:190617/1‑120 (MQ=255)
                                                                                                                                       ccAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAGAACGGCGTGCGGTc         >  1:221791/1‑148 (MQ=255)
                                                                                                                                        cAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAGAACGGCGTGCGGTc         >  5:233391/1‑147 (MQ=255)
                                                                                                                                        cAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAGAACGGCGTGCGGTCg        <  4:137335/148‑1 (MQ=255)
                                                                                                                                        cAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAGAACGGCGTGCGGTCg        >  3:137335/1‑148 (MQ=255)
                                                                                                                                             cACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAGAACGGCGTGCGGTCGAGcagc  <  6:233391/149‑3 (MQ=255)
                                                                                                                                             |                                                                                                                                                    
GCGAGCCCTTCTGCTGTACATGCTCGCCCAGTACCTGGCGCAATGCTTCGTGCAGCAGGTGGGTAGCGGAGTGATTCAACGAGGTGGCGTGCTGTACGTCGGCATCGACCTTGGCCTCGACGGGCGAACCGATCACCAGCGCACCGCTGGTCACCACGCCGTGGTGCAGGAAGGCACCGCCGGTCTTGGTGGTGTCGCGCACGTCAAAGCGTGCAGCGCCAGCCTGCAAGAAGCCGGTATCACCCACCTGACCACCGGACTCGGCGTAGAACGGCGTGCGGTCGAGCACC  >  NC_002947/5082510‑5082799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑