| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 354,548 | T→A | 5.6% | P208P (CCA→CCT) | cbcW ← | choline/betaine/carnitine ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 354,548 | 0 | T | A | 5.6% | 217.1 / 2.9 | 71 | P208P (CCA→CCT) | cbcW | choline/betaine/carnitine ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base T (32/35); new base A (2/2); total (34/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
CCAGGCCCGCTTCGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTG > NC_002947/354400‑354695 | ccAGGCCCGCTTCGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCtt < 3:159618/149‑1 (MQ=255) aGGCCCGCTTCGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCATga < 2:257230/149‑2 (MQ=255) gCCCGCTTCGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCa > 6:158103/1‑149 (MQ=255) ccGCTTCGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATc < 3:78569/149‑1 (MQ=255) cGCTTCGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATcg > 3:148728/1‑149 (MQ=255) cGCTTCGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATcg < 4:330675/149‑1 (MQ=255) ttCGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGCCAGCGACAGCATGATGCATTGAGTGACCACGGCGGCGATGCTTGGCATCGCGt > 4:207730/1‑149 (MQ=255) ttCGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATcgc > 4:162480/1‑147 (MQ=255) ttCGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATcgc < 3:162480/147‑1 (MQ=255) ttCGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGt > 6:45219/1‑149 (MQ=255) cGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGt < 8:230482/147‑1 (MQ=255) ccAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGt > 2:77854/1‑149 (MQ=255) aGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGTCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTc > 3:141267/1‑149 (MQ=255) tatCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACgg < 1:77854/149‑1 (MQ=255) tatCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACgg < 4:148728/149‑1 (MQ=255) atCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACggg > 3:246826/1‑149 (MQ=255) cggcggTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACAAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGt > 1:226074/1‑148 (MQ=255) ggcggTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTa < 3:322206/148‑1 (MQ=255) gtTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCt < 7:137322/149‑1 (MQ=255) tCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCAAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTga > 5:161681/1‑149 (MQ=255) cAGTGCGTTGTCCACAGGTTTGCCCAGGCCTTCAGGGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATGGCGTGCGGCAGTTCGATACGGGTAAGCAGCTgt < 6:178255/148‑2 (MQ=255) cAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCTACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTga < 7:54365/148‑1 (MQ=255) gTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCTGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTgacga < 6:161681/149‑1 (MQ=255) tGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTgacgac > 1:197967/1‑149 (MQ=255) aCCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGTTAAGCAGCTGACGACGCGatca < 6:25857/149‑1 (MQ=255) aCCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGag > 5:366892/1‑147 (MQ=255) acaGGTTTGCCCAGGTCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGcc < 4:141267/149‑1 (MQ=255) ttGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCaccctc > 8:101305/1‑144 (MQ=255) cccAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCa < 1:44080/103‑1 (MQ=255) cccAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCa > 2:44080/1‑103 (MQ=255) ccAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGagcagc > 6:244110/1‑138 (MQ=255) ccAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGagcagc < 5:244110/138‑1 (MQ=255) ccAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTg > 3:82795/1‑149 (MQ=255) aGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGcc < 2:197967/149‑1 (MQ=255) ccATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGc < 8:168972/149‑1 (MQ=255) aTCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGt < 5:166696/149‑1 (MQ=255) aTCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGt < 5:158103/149‑1 (MQ=255) aTCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCATGGCATCGCGTGCGGCAGTTCGATACGGGTAAGAAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGt > 1:276550/1‑149 (MQ=255) tCAGCGCCAACCAGGGCGGCAATGACCCCCATCGACAGCGACAGCTTGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTc > 1:252871/1‑149 (MQ=255) cAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAAc < 6:366892/149‑1 (MQ=255) cAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAAc < 5:45219/149‑1 (MQ=255) ccAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCaaa < 2:48810/124‑1 (MQ=255) ccAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCaaa > 1:48810/1‑124 (MQ=255) cAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCtt > 1:195453/1‑149 (MQ=255) aGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTg > 4:321976/1‑149 (MQ=255) gggCGGCAATGACCAGCATCGACAGCGACAGCATGCTGCTTTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGc < 3:207730/149‑1 (MQ=255) accaccATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCg > 6:332197/1‑147 (MQ=255) caccaTCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCg > 3:324401/1‑145 (MQ=255) accaTCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGAt < 3:321976/149‑1 (MQ=255) gcgacagcATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCaggtag < 2:195453/149‑1 (MQ=255) gacagcATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCaggtaggt > 4:321030/1‑149 (MQ=255) cATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGc > 7:205797/1‑149 (MQ=255) cATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGc < 1:97133/149‑1 (MQ=255) gatgCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGc < 1:230951/43‑1 (MQ=255) gatgCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGc > 2:230951/1‑43 (MQ=255) ttGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGgcg > 5:155460/1‑149 (MQ=255) aGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCgcag > 6:143546/1‑149 (MQ=255) aGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCgca < 2:226074/148‑1 (MQ=255) acacCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAAt < 3:323926/149‑1 (MQ=255) cggcggCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGc > 5:180388/1‑148 (MQ=255) ggcggcGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCgcag < 1:248561/140‑1 (MQ=255) ggcggcGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCgaag > 2:248561/1‑140 (MQ=255) gcacgcgATGCCAAGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGc > 3:117341/5‑107 (MQ=255) gcacgcgATGCCAAGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGc < 4:117341/103‑1 (MQ=255) gcggcgATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGaa < 6:180388/149‑1 (MQ=255) gcggcgATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGaa > 7:215396/1‑149 (MQ=255) cggcgATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAac < 4:324401/149‑1 (MQ=255) acgcgATGCCAAGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGc > 8:64243/3‑79 (MQ=255) acgcgATGCCAAGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGc < 7:64243/77‑1 (MQ=255) ggcgATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATCGGCGCAGCAATGGCGAaca < 8:215396/149‑1 (MQ=255) gCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGc > 4:125660/1‑119 (MQ=255) gCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGc < 3:125660/119‑1 (MQ=255) ttGGCATCGCGTGCGGCAGTTCGGTACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTg > 5:300303/1‑149 (MQ=255) | CCAGGCCCGCTTCGAAGCCCAGGGAGATATCGGCGGTGTTCAGTGCGTTGACCACAGGTTTGCCCAGGCCATCAGCGCCAACCAGGGCGGCAATGACCACCATCGACAGCGACAGCATGATGCATTGAGTGACACCGGCGGCGATGCTTGGCATCGCGTGCGGCAGTTCGATACGGGTAAGCAGCTGACGACGCGAGCAGCCAAAGGCCTTGCCGGCGTCCATCAACTCTTGCGGCACGTCGCAGATGCCCAGGTAGGTCAGGCGAATGGGCGCAGCAATGGCGAACACCACGGTG > NC_002947/354400‑354695 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |