| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,305,663 | A→G | 6.3% | L530P (CTG→CCG) ‡ | recC ← | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,305,663 | 0 | A | G | 6.3% | 227.2 / 4.4 | 80 | L530P (CTG→CCG) ‡ | recC | multifunctional ATP‑dependent DNA helicase/dsDNA/ssDNA exonuclease/ssDNA endonuclease recombinase subunit |
| Reads supporting (aligned to +/- strand): ref base A (39/35); new base G (3/2); total (43/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.62e-01 | |||||||||||
GCCGATCAGTGCCGCGTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGACCGCG > NC_002947/5305518‑5305809 | gCCGATCAGTGCCGCGTCCAGGCCACCGATTTCATAGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCCACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCCGGc > 4:160671/1‑149 (MQ=255) gATCAGTGCCGCGTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCg > 6:52125/1‑149 (MQ=255) ccGCGTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCGAGCCTGGGCTTGCCCGccgg < 8:35034/149‑4 (MQ=255) cgcgTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTgc‑g > 1:270176/1‑149 (MQ=255) cgTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGc‑gcg > 5:283289/1‑149 (MQ=255) tCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑gcggc < 7:80847/149‑1 (MQ=255) aGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTc < 3:205977/149‑1 (MQ=255) gATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGcccc < 6:283289/149‑1 (MQ=255) tCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACACCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACg > 5:227908/1‑149 (MQ=255) aTCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAACAACCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGCCACGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACg > 1:98444/1‑148 (MQ=255) tCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGAt > 5:195906/1‑149 (MQ=255) tCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACACCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGAt < 6:227908/149‑1 (MQ=255) aGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGc > 6:185537/1‑147 (MQ=255) ttCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAgcgc > 1:218274/1‑149 (MQ=255) ttCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAgcgc > 1:213001/1‑149 (MQ=255) aaTGCGATGACAGGCCTCACCCACCCCCACGTCATAACCCATC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCTATCCCGGCTTGCAAGCCCAGTCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCt < 7:260938/149‑1 (MQ=255) aaTGCCATCACAGGCCTCACCCATCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCt > 5:35080/1‑149 (MQ=255) gCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGa > 7:169966/1‑149 (MQ=255) gCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCCCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGa > 1:309878/1‑149 (MQ=255) cATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATc > 8:52099/1‑149 (MQ=255) aTCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑Cg > 5:205364/1‑145 (MQ=255) aTCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑Cg < 6:205364/145‑1 (MQ=255) caGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCg < 5:185537/149‑1 (MQ=255) acccacccCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCACCg > 7:116513/1‑149 (MQ=255) cccacccCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGt < 8:136509/149‑1 (MQ=255) cccacccCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGt > 8:29896/1‑149 (MQ=255) acccCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCGCT‑CGATCCAGCGGTGCAGCGTggg < 7:52099/149‑1 (MQ=255) ccccACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCACGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCCGCGCCCT‑CGATCCAGCGGTCCAGCGgggg > 8:264068/1‑147 (MQ=255) ccACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAgg > 2:352745/1‑149 (MQ=255) cACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGt > 6:255656/1‑149 (MQ=255) cACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGt < 6:195906/149‑1 (MQ=255) aCCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGCTCCAGCGGTGCAGCGTGGGCAGGTCGTTTTcgc > 2:230686/1‑149 (MQ=255) aCCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGt < 3:61253/132‑1 (MQ=255) aCCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGt > 4:61253/1‑132 (MQ=255) cccAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAg < 4:295792/137‑1 (MQ=255) cccAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAg > 3:295792/1‑137 (MQ=255) cccAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTcgc < 6:275792/148‑1 (MQ=255) cccAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTcgc > 5:275792/1‑148 (MQ=255) ccAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTcgcg > 1:177530/1‑148 (MQ=255) tGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAg < 1:352745/149‑1 (MQ=255) gcggcgCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGa < 4:96981/104‑1 (MQ=255) gcggcgCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGa > 3:96981/1‑104 (MQ=255) cggcgCAGGCCGAAACGCCAACTGGTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGc < 8:67098/148‑1 (MQ=255) ggcgCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCgg < 5:52125/149‑1 (MQ=255) gCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGa > 4:56423/1‑149 (MQ=255) gCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGa < 2:213001/149‑1 (MQ=255) gCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGa < 2:218274/149‑1 (MQ=255) ccGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCgg > 5:345527/1‑141 (MQ=255) ccGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCgg < 6:345527/141‑1 (MQ=255) cGAAACGCGAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTCCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACt > 6:228292/1‑149 (MQ=255) cGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACt > 4:273759/1‑149 (MQ=255) cGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCgt < 2:177530/149‑2 (MQ=255) cGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCgg < 1:230686/149‑1 (MQ=255) cGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCgg < 3:56423/149‑1 (MQ=255) cGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCgg < 6:35080/149‑1 (MQ=255) gCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGCGGCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCgg > 1:269028/1‑149 (MQ=255) ccAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCa > 4:164523/1‑149 (MQ=255) aaCTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACg < 5:228292/149‑1 (MQ=255) ctgttctgttCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTc < 2:270176/149‑1 (MQ=255) ttctgttcGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCcag > 5:35001/1‑149 (MQ=255) ttctgttcGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCcag > 1:266342/1‑149 (MQ=255) ctgttcGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCcag > 6:136330/1‑147 (MQ=255) cGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTc < 8:169966/148‑1 (MQ=255) cGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTc > 8:124496/1‑148 (MQ=255) gAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTc > 3:250284/1‑147 (MQ=255) aGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAg < 6:35001/149‑1 (MQ=255) gcgcagcggGCGAGCCTGGGCTTGCCCGCCGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAg < 8:227737/143‑1 (MQ=255) gcgcagcggGCGAGCCTGGGCTTGCCCGCCGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAg > 7:227737/6‑148 (MQ=255) gCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGc > 8:141150/1‑149 (MQ=255) cccGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCa > 8:177424/1‑149 (MQ=255) ccGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCAc < 7:124496/149‑1 (MQ=255) gcggGCGAGCCTGGGCTTGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTc > 4:84320/1‑149 (MQ=255) cggGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCg < 3:273759/149‑1 (MQ=255) gggCGAGCCTGGGCTTGCCCGCCGG‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGc > 1:164330/1‑149 (MQ=255) aaGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCTGCGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGa > 1:277906/1‑149 (MQ=255) aaGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGAc < 2:98444/149‑1 (MQ=255) aGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGAcc < 5:136330/149‑1 (MQ=255) gCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCAGGCGCGGACt < 7:184652/112‑1 (MQ=255) cccAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGcggtcagc < 7:264068/149‑8 (MQ=255) ccAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGACcgcg < 5:255656/149‑1 (MQ=255) | GCCGATCAGTGCCGCGTCCAGGCCACCGATTTCATCGTAGGGTTCAATGCCATCACAGGCCTCACCCACCCCCACGGCATAACCCAAC‑AGCATGCGGCGCAGGCCGAAACGCCAACTGTTCTGTTCGAGCCCGGCGGGCAAGCCCAGGCTCGCCCGCTGC‑GCGGCGTCAAGGCCCCAACGGATGCCAGCGCCCT‑CGATCCAGCGGTGCAGCGTGGGCAGGTCGTTTTCGCGGATGCCGAAGCGGGCGCGGACTGCCGGCACGTCCAGCAGGTCGAGCACTTCGCTGACCGCG > NC_002947/5305518‑5305809 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |