| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,375,631 | T→A | 8.2% | intergenic (‑191/+8) | dnaJ ← / ← dnaK | chaperone protein DnaJ/chaperone protein DnaK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,375,631 | 0 | T | A | 8.2% | 175.7 / 5.4 | 61 | intergenic (‑191/+8) | dnaJ/dnaK | chaperone protein DnaJ/chaperone protein DnaK |
| Reads supporting (aligned to +/- strand): ref base T (25/31); new base A (2/3); total (27/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.56e-01 | |||||||||||
CATCAGCACCCGCCCGCTACCCATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGCTGTTCAGCCGACTGCTCGGCGTACATCTTCTGGGCAACCGGGG > NC_002947/5375484‑5375778 | caTCAGCACCCGCCCGCTACCCATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATg < 1:267654/149‑1 (MQ=255) aTCAGCACCCGCCCGCTACCCATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAACCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATg > 5:118842/1‑148 (MQ=255) gCACCCGCCCGCTACCCATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAgg > 4:213820/1‑148 (MQ=255) gCACCCGCCCGCTACCCATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACAAGCAgt > 1:196728/1‑147 (MQ=255) aCCCGCCCGCTACCCATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGAt > 8:87554/1‑149 (MQ=255) ccgaTACCCATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCATTTACGCCAACGCGGGAGCAAGCCCCGGGG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGc < 3:346504/149‑1 (MQ=255) gcTACCCATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAg > 5:61448/1‑137 (MQ=255) gcTACCCATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAg < 6:61448/137‑1 (MQ=255) aCCCATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCttgt < 4:175530/148‑1 (MQ=255) cccATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCttgttg > 8:41884/1‑149 (MQ=255) cccATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCttgttg < 6:91140/149‑1 (MQ=255) ccATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCttgttgt > 3:40722/1‑149 (MQ=255) ccATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACAAGCAGTAATCCCTGCatgttgt < 2:196728/149‑1 (MQ=255) ccATTAAGAGCCACTGACAGATACTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACAAGCAGTAATCCCTGCatgttgt < 4:136297/149‑1 (MQ=255) cATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACAAGCAGTAATCCCTGCatgttgt > 4:343889/1‑148 (MQ=255) cATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACAAGCAGTAATCCCTGCatgttgt < 3:343889/148‑1 (MQ=255) aTTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCttgttgttg > 5:8123/1‑149 (MQ=255) aTTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCttgttgttg < 6:67579/149‑1 (MQ=255) aTTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCttgttgttg > 5:333061/1‑149 (MQ=255) ttAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTtgttgttgt < 1:133618/149‑1 (MQ=255) aaGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTc < 8:73518/148‑1 (MQ=255) gagCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAACCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCttt < 6:118842/149‑1 (MQ=255) agCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTc < 7:87554/149‑1 (MQ=255) aCAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCActtctt < 4:232245/148‑1 (MQ=255) aCAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCActtctt < 1:104801/148‑1 (MQ=255) cTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTc < 7:188857/148‑1 (MQ=255) cTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACAGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCg > 2:146287/1‑149 (MQ=255) tGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCgg > 5:348500/1‑149 (MQ=255) aaaTTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGc < 4:177797/145‑1 (MQ=255) aaaTTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGc > 3:177797/1‑145 (MQ=255) gAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGt > 8:23562/1‑148 (MQ=255) ttCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATc > 6:71536/1‑149 (MQ=255) ttCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATc < 5:51466/149‑1 (MQ=255) ttCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATc < 5:56863/149‑1 (MQ=255) aGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGc < 7:41884/149‑1 (MQ=255) tACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTg < 5:71536/149‑1 (MQ=255) cGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTgg < 4:40722/148‑1 (MQ=255) gCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCg < 3:163033/122‑1 (MQ=255) gCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCg > 4:163033/1‑122 (MQ=255) gCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCt > 4:103778/1‑149 (MQ=255) cgcgcgGGGGCTTGCTCCCGCGTTGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACAACGTCATCGTGCTTGGCTTc > 4:211955/3‑149 (MQ=255) aaCGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTcc > 7:114674/1‑149 (MQ=255) ggAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCg > 6:196281/1‑149 (MQ=255) cAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCct < 5:196281/149‑1 (MQ=255) aGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCctgc < 3:103778/149‑1 (MQ=255) cccGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTgcg > 5:149679/1‑149 (MQ=255) cctcg‑cgGCGACATCCTACCTGCTCTCCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTgcgc < 8:114674/146‑1 (MQ=255) ccGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTgcgc < 6:333061/149‑1 (MQ=255) cgcg‑cgGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTgcgcg < 3:213820/149‑1 (MQ=255) aTCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAgg > 8:91785/1‑149 (MQ=255) aTCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACACTGAgg > 5:297151/1‑149 (MQ=255) cTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGCTg < 7:23562/149‑1 (MQ=255) ccAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGCTGt < 1:146287/147‑1 (MQ=255) cAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCAGCGTGGTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGCTGtt > 6:275302/1‑147 (MQ=255) cACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGCTGTTCAGCCGa < 6:348500/149‑1 (MQ=255) aaaCGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGTTGTTCAGc < 2:48055/139‑1 (MQ=255) aaaCGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGTTGTTCAGc > 1:48055/1‑139 (MQ=255) aaaCGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGCTGTTCAGCCGACTGCTCg > 6:538/1‑149 (MQ=255) ggTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGCTGTTCAGCCGACTGCTCg > 4:156072/1‑142 (MQ=255) ggTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGCTGTTCAGCCGACTGCTCg < 3:156072/142‑1 (MQ=255) acttGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGCTGTTCAGCCGACTGCTCGGCGTACATCTTCTGTGCAACCgg < 6:311109/146‑1 (MQ=255) aTGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGCTGTTCAGCCGACTGCTCGGCGTACATCTTCTGGGCAACCgggg < 6:149679/149‑1 (MQ=255) | CATCAGCACCCGCCCGCTACCCATTAAGAGCCACTGACAGATGCTGTAAAAATTCTCGAATTCCAGATACGCCAACGCGGGAGCAAGCCCCCGCG‑CGGCGACATCCTACCAGCTCACCGGCAAACGACGGTGAACCGGCCGACAACATGCAGGGATTACTGCTTGTTGTTGTCTTTCACTTCTTCGAACTCGGCGTCAACCACGTCATCGTGCTTGGCTTCCGGCTCGGCCTGCTGCGCGCCACCCTGAGGCTGTTCAGCCGACTGCTCGGCGTACATCTTCTGGGCAACCGGGG > NC_002947/5375484‑5375778 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |