| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,452,093 | G→A | 6.5% | L208L (CTG→CTA) | lnt → | apolipoprotein N‑acyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,452,093 | 0 | G | A | 6.5% | 234.1 / 3.6 | 77 | L208L (CTG→CTA) | lnt | apolipoprotein N‑acyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (32/40); new base A (2/3); total (34/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.68e-01 | |||||||||||
GGCCGGCCTTGCGCCACTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGACGCGCAACTGGCGCTATACCGCGACCTGAGC > NC_002947/5451946‑5452237 | ggccggccTTGCGCCACTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTgg > 8:60859/1‑149 (MQ=255) ccggccTTGCGCCACTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGc > 2:146495/1‑149 (MQ=255) gccTTGCGCCACTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTg < 1:146495/149‑1 (MQ=255) gccTTGCGCCACTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTg < 5:211654/149‑1 (MQ=255) ccTTGCGCCACTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTgg < 4:205211/149‑1 (MQ=255) cTTGCGCCACTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTCCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGgc > 2:40766/1‑149 (MQ=255) ttGCGCCACTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGgcg > 8:185319/1‑149 (MQ=255) ttGCGCCACTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGgcg > 8:59142/1‑149 (MQ=255) gcgcCACTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGgcg < 1:138358/147‑1 (MQ=255) gcgcCACTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGgcg < 7:185319/147‑1 (MQ=255) cttGGGCGGGGGATGGCCGTATTCCTTCCACCTCGGCCTTACCGGCGGCCTGGTTGGCAAACTGCACCGCCTTGGGCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAgg < 2:257237/147‑1 (MQ=255) aCTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAgg < 3:9254/149‑1 (MQ=255) tGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTACATGGCCTTGGCCAGCGTGATGTTGATGCCCCCCGGGGGCCGGGGCGTGGCGCGAAAgg > 1:257237/1‑147 (MQ=255) ggCGGGGTATGGCTGATTTCCTTCCCCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGc < 7:255295/147‑1 (MQ=255) ggCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGGTgg < 1:168399/130‑1 (MQ=255) ggCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTgg > 2:168399/1‑130 (MQ=255) ggTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCt < 7:60859/149‑1 (MQ=255) ggTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCG‑CCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTAGGCATGGCCCTTGAGCGCCAGGccca < 1:342995/149‑3 (MQ=255) tGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCATGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGa < 5:69519/148‑1 (MQ=255) ggCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGAc > 2:172191/1‑148 (MQ=255) gCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCa < 2:70754/149‑1 (MQ=255) gCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCa > 3:112225/1‑149 (MQ=255) tttCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTgg < 8:136688/140‑1 (MQ=255) tttCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGaagatcgg > 7:136688/1‑141 (MQ=255) cTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCa < 5:264214/148‑1 (MQ=255) ttCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCaa > 4:351133/1‑122 (MQ=255) ttCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCaa < 3:351133/122‑1 (MQ=255) cACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAgg < 7:123154/147‑1 (MQ=255) cACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAgg < 1:40766/147‑1 (MQ=255) cACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGc > 1:171288/1‑148 (MQ=255) aCCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGa > 3:24986/1‑149 (MQ=255) ccTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTTGCCGTGGCCAGCGTTCTGTAGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATc > 7:232110/1‑149 (MQ=255) ccTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAgg < 1:336682/144‑1 (MQ=255) ccTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAgg > 2:336682/1‑144 (MQ=255) ccTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATc > 8:251538/1‑149 (MQ=255) ccTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATc > 8:310425/1‑149 (MQ=255) tCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCt < 8:265886/126‑1 (MQ=255) tCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCt > 7:265886/1‑126 (MQ=255) tCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCg > 1:297440/1‑149 (MQ=255) gCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGcg > 8:89083/1‑148 (MQ=255) aCCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGaaa < 4:24986/147‑1 (MQ=255) cgccgcCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTgg < 5:117282/149‑1 (MQ=255) ccgccCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTgg > 3:116502/1‑147 (MQ=255) cgccCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAg < 2:171288/149‑1 (MQ=255) ccTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGa > 5:132627/1‑149 (MQ=255) tgctgTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATc > 8:4589/1‑149 (MQ=255) gctgTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATc > 3:289386/1‑148 (MQ=255) ctgTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCa < 7:251538/149‑1 (MQ=255) cagcgCAACCTCCCCCCCCCCCGCCCCCCCCCCGCGTCCCCGCCCGCCGCCAGCGCGCTGCTGCCGGCCCCCTGGGGGCTGCGCCCGGCGCGCAAGGGCCATGCCTGGACCATCCCGCCAGCCGATCCCCTGAAAGTGGCAGCGAcccc < 4:289386/145‑2 (MQ=255) tgtgCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAg < 7:4589/149‑1 (MQ=255) tgCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAgg < 2:76347/148‑1 (MQ=255) ccTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTAGGCATGGCCCTTGAGCGCCAGGcccagc > 5:111096/1‑97 (MQ=37) ccTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTAGGCATGGCCCTTGAGCGCCAGGcccagc < 6:116294/101‑5 (MQ=37) ccTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTAGGCATGGCCCTTGAGCGCCAGGcccagc < 6:111096/101‑5 (MQ=37) ccTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTAGGCATGGCCCTTGAGCGCCAGGcccagc > 5:116294/1‑97 (MQ=37) cACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGa < 2:297440/149‑1 (MQ=255) aCCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAg > 5:45473/1‑149 (MQ=255) ccccgccccTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGa > 5:256983/1‑148 (MQ=255) gccccTCGTTCCTGGCCGTGGCCAGCGGGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATgg < 5:20197/149‑1 (MQ=255) cccTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGa < 1:172191/149‑1 (MQ=255) cTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGaaa < 5:60003/96‑1 (MQ=255) cTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGaaa > 6:60003/1‑96 (MQ=255) tGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCa < 3:172064/101‑1 (MQ=255) tGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCa > 4:172064/1‑101 (MQ=255) tGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCcgcg > 4:28235/1‑146 (MQ=255) tGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCcgcg < 3:28235/146‑1 (MQ=255) gCCAGCGGGCTGTTGCGGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGAcgc < 8:232110/149‑1 (MQ=255) ccAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCgcgc < 3:314868/138‑1 (MQ=255) ccAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCgcgc > 4:314868/1‑138 (MQ=255) ccAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGAcgcg > 5:208167/1‑149 (MQ=255) cGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGACGCGCAAc < 6:208167/149‑1 (MQ=255) cGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGACGCGCAAc < 4:112225/149‑1 (MQ=255) ttGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGACGCGCAACTGgcgc < 7:102225/148‑1 (MQ=255) gCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGACGCGCAACTGGCGCta < 7:59142/148‑1 (MQ=255) cTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGACGCGCAACTGGCGCtata > 8:186455/1‑149 (MQ=255) cTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGACGCGCAACTGGCGCtata < 7:310425/149‑1 (MQ=255) tGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGACGCGCAACTgg > 6:196734/1‑141 (MQ=255) tGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGACGCGCAACTgg < 5:196734/141‑1 (MQ=255) gCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGACGCGCAACTGGCGCTATACcg > 4:305300/1‑149 (MQ=255) ggCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGACGCGCAACTGGCGCTATACCGCGACCTGAGc < 4:116502/149‑1 (MQ=255) gggCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCcgc < 2:132188/105‑1 (MQ=255) gggCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCcgc > 1:132188/1‑105 (MQ=255) | GGCCGGCCTTGCGCCACTGGGCGGGGTATGGCTGATTTCCTTCACCCTCGCCCTTACCGCCGCCCTGCTGTGCAACCTGCACCGCCTGCGCCCCCGCCCCTCGTTCCTGGCCGTGGCCAGCGTGCTGTTGCTGGCCCCCTGGGGGCTGGGCCTGGCGCTCAAGGGCCATGCCTGGACCATTCCGGCAGGCGATCCGCTGAAAGTGGCAGCGATCCAGGGCAACGTCGAGCAGGACCTGAAATGGGACCCCGCGCACATCGACGCGCAACTGGCGCTATACCGCGACCTGAGC > NC_002947/5451946‑5452237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |