Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 402,067 | C→G | 5.5% | L153L (CTG→CTC) ‡ | PP_0335 ← | glutathione S‑transferase family protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 402,067 | 0 | C | G | 5.5% | 286.1 / 4.5 | 90 | L153L (CTG→CTC) ‡ | PP_0335 | glutathione S‑transferase family protein |
Reads supporting (aligned to +/- strand): ref base C (40/45); new base G (3/2); total (43/47) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.67e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.77e-01 |
GACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCATCCATGATCGCATC > NC_002947/401923‑402213 | gACCATCGATGGCCGCTTGACCGCCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCt > 6:329471/1‑149 (MQ=255) ccATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTcc < 1:17683/149‑1 (MQ=255) cATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCg > 4:268726/1‑149 (MQ=255) cATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCACTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCg < 5:302587/149‑1 (MQ=255) cATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCACTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCg > 6:302587/1‑149 (MQ=255) gATGGCCGCTTGACCGCCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCaa < 5:329471/149‑1 (MQ=255) cGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGtgctc < 4:190928/149‑1 (MQ=255) cGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCAAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGtgctc > 2:214277/1‑149 (MQ=255) cTTGACCACCTCGGTATTCGACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGtgctcc < 6:252039/148‑1 (MQ=255) gACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGtgctcctg < 7:205586/147‑1 (MQ=255) gACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGtgctcc < 6:252036/145‑1 (MQ=255) gACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGtgctcc > 5:252036/1‑145 (MQ=255) gACAACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCAAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGtgctcc > 5:252039/1‑145 (MQ=255) ccaccTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGtgctcctgctc > 4:151924/1‑148 (MQ=255) caccTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGAGGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGtgctcctgctc > 8:113128/1‑147 (MQ=255) caccTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGtgctcctgctc > 4:180862/1‑147 (MQ=255) accTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAg < 4:158676/149‑1 (MQ=255) ccTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAgg < 3:268726/149‑1 (MQ=255) gCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTc < 3:180862/149‑1 (MQ=255) aTACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTc > 8:256213/1‑147 (MQ=255) aCGCCGCCAACCCCGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTa > 5:237383/1‑149 (MQ=255) aCGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGCTGATCTCCGGc > 4:66257/1‑119 (MQ=255) aCGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGCTGATCTCCGGc < 3:66257/119‑1 (MQ=255) aCGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAAGACAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTa > 1:273127/1‑149 (MQ=255) gccAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTAcggcg > 5:45608/1‑149 (MQ=255) gccAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTAcggcg > 5:40227/1‑149 (MQ=255) ccAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTAcggcgg < 8:286335/149‑1 (MQ=255) aCCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATc < 4:273984/149‑1 (MQ=255) ccAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCGAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTCTCCAGGCTACGGCGGATCtt > 4:198089/1‑149 (MQ=255) ccAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCtt > 7:273397/1‑149 (MQ=255) cAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTg < 1:127612/149‑1 (MQ=255) gcgcTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAg < 7:302420/126‑1 (MQ=255) gcgcTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAg > 8:302420/1‑126 (MQ=255) gcTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTACTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTgc > 8:109086/1‑149 (MQ=255) aCGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCtt < 8:273397/149‑1 (MQ=255) gccagccaAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGa < 8:232342/129‑1 (MQ=255) gccagccaAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGa > 7:232342/1‑129 (MQ=255) gccagccaAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTg > 1:139367/1‑134 (MQ=255) gccagccaAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTg < 2:139367/134‑1 (MQ=255) ccagccaAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCAccc > 8:120393/1‑139 (MQ=255) ccagccaAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCAccc < 7:120393/139‑1 (MQ=255) ccagccaAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGca < 6:45608/149‑1 (MQ=255) ccagccaAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGca < 6:40227/149‑1 (MQ=255) aaaCCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAgg < 6:352237/103‑1 (MQ=255) aaaCCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAgg > 5:352237/1‑103 (MQ=255) aaaCCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGcagccagc > 3:347769/1‑149 (MQ=255) gggCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATccc < 4:347769/149‑1 (MQ=255) ggCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCa < 7:256213/149‑1 (MQ=255) ggCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCa < 3:198089/149‑1 (MQ=255) aCGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGt < 2:279676/116‑1 (MQ=255) aCGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGt > 1:279676/1‑116 (MQ=255) cGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTACTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCtt < 7:109086/149‑1 (MQ=255) gCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTcc < 6:278793/95‑1 (MQ=255) gCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTcc > 5:278793/1‑95 (MQ=255) aaaTCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTc > 7:236444/1‑149 (MQ=255) aaaTCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTc > 1:18260/1‑149 (MQ=255) aaaTCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGACGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTc < 6:315809/149‑1 (MQ=255) cAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCctct < 3:49849/148‑1 (MQ=255) cAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTg < 6:237383/149‑1 (MQ=255) ccAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAg > 2:181036/1‑148 (MQ=255) aGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAgg > 6:99794/1‑147 (MQ=255) gcgcACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAg < 2:273127/149‑1 (MQ=255) gcgcACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAg < 4:257269/149‑1 (MQ=255) acaGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGctct < 8:78354/149‑1 (MQ=255) aGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTc < 6:244578/127‑1 (MQ=255) aGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTc > 5:244578/1‑127 (MQ=255) gCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATa > 2:241015/1‑149 (MQ=255) aCGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCg > 5:326144/1‑149 (MQ=255) gCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAg < 2:190571/136‑1 (MQ=255) gCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAg > 1:190571/1‑136 (MQ=255) gCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGc < 7:113128/149‑1 (MQ=255) ccAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCt < 1:241015/149‑1 (MQ=255) aaTCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGc < 4:1769/124‑1 (MQ=255) aaTCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGc > 3:1769/1‑124 (MQ=255) aaTCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTc > 3:310648/1‑148 (MQ=255) aGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGc < 1:181036/149‑1 (MQ=255) ggTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCa > 6:299719/1‑149 (MQ=255) tCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCTGGCTACGGCGGATGTTGTCACCCTGCGCTTGCAGCCAGCCATGCCAGCGCTTGTCCTCTGGCCGGAGGAAGCTCTCATACCGGCTCGAGACTGCCGCATc < 8:43874/149‑1 (MQ=255) tCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCATc < 8:38253/149‑1 (MQ=255) tCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCATc < 4:310648/149‑1 (MQ=255) cGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCATc > 3:163203/1‑148 (MQ=255) gAAGCCGGAGATCAGCTCCGGCAAGTGCTCGTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGTCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCATCCa > 1:29168/1‑149 (MQ=255) ttgCCGGAGCTGATCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCATCCAt > 5:1505/3‑149 (MQ=255) gCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCATCCATGa > 2:184467/1‑149 (MQ=255) cGGAGCTGATCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTc > 3:42283/1‑128 (MQ=255) cGGAGCTGATCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTc < 4:42283/128‑1 (MQ=255) cGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCATCCATGATc < 5:299719/149‑1 (MQ=255) gagaTCAGCTCCGGCAAGTGCTCCTGCTCCATGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCATCCATGATCg > 4:332332/1‑148 (MQ=255) gaTCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCATCCATGATCGCAt < 1:214277/149‑1 (MQ=255) aTCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCATCCATGATCGCATc < 2:18260/149‑1 (MQ=255) | GACCATCGATGGCCGCTTGACCACCTCGGCATACCACGCCGCCAACCCAGGCTGGCGCTCACGCCAGCCAAACCCGGGCTGACGCAAATCCAGATAGCCCAGCGCACAGGCCACGCCAATCGCCGCCAGGTCGAAGCCGGAGATCAGCTCCGGCAAGTGCTCCTGCTCCAGGTTGTCCAGGCTACGGCGGATCTTGTCACCCTGCGCTTGCAGCCAGCCATCCCAGCGCTTGTCCTCTGGCCGCAGGAAGCTCTCATACCGGCTCGACACTGCCGCATCCATGATCGCATC > NC_002947/401923‑402213 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |