| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,988,819 | T→C | 32.1% | intergenic (+113/‑433) | kefB‑III → / → PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,988,819 | 0 | T | C | 32.1% | 79.5 / 45.4 | 61 | intergenic (+113/‑433) | kefB‑III/PP_mr64 | glutathione‑regulated potassium/H+ antiporter/C4 ncRNA |
| Reads supporting (aligned to +/- strand): ref base T (16/25); new base C (14/5); total (31/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.51e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
GAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTC > NC_002947/5988671‑5988963 | tagctggtggGGTTGTTTGAGTCGGATTCGGACTGAGGCCTTTTGGCGCGTGCGTTGAGGGTTGTAGTGCATGTGATATTGTGCGCCGAGCGGGCGGCGATTCGATGTTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCtg‑t < 4:247146/148‑1 (MQ=25)gagctggagcGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCtg‑t < 5:260088/149‑1 (MQ=255) agctggagcGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAATCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCtg‑tg < 5:194205/149‑1 (MQ=255) agctggagcGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCtg‑tg < 8:242770/149‑1 (MQ=255) tgttTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAA‑CCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCAcgc > 5:363447/1‑148 (MQ=255) tttGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCAcgc > 1:145570/1‑147 (MQ=255) ttGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAg > 6:253954/1‑149 (MQ=255) ttGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAg > 7:8414/1‑149 (MQ=255) tGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAg < 8:8414/148‑1 (MQ=255) cGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCt > 1:187689/1‑149 (MQ=255) aTGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGgc < 7:255458/149‑1 (MQ=255) ttttcagcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCa > 3:89356‑M2/67‑149 (MQ=255) agcgcctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTggggcatgtct > 8:243903‑M2/62‑144 (MQ=255) aGGCCTTTTTGAGCGTGCCTTTAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGAGCGGCGCTTCGCGGGTAAAACCGCTCCTACGTTTGTTTCGGTCAAGTTATTCCTG‑TGGGACGCGCAAGCGAGCC‑CCCTGGCTCACGCCTCg < 3:52531/149‑1 (MQ=25) ggCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGa < 6:165467/149‑1 (MQ=255) gCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGa > 5:359916/1‑148 (MQ=255) cctgggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGat < 4:142524‑M2/92‑1 (MQ=255) ggaggtgttcgccgggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATc < 7:243903‑M2/95‑1 (MQ=255) cTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAG‑C‑CCCTGGCGCACGCCt > 6:61655/1‑128 (MQ=255) cTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAG‑C‑CCCTGGCGCACGCCt < 5:61655/128‑1 (MQ=255) ggagagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTacaaac > 2:254149‑M2/40‑147 (MQ=255) gAGGGTTGTAGTGCATGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTacaaacaa < 5:253954/148‑1 (MQ=255) agagtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAgg > 2:260017‑M2/38‑149 (MQ=255) gtttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCg < 1:260017‑M2/114‑1 (MQ=255) tttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGt > 1:216998‑M2/34‑149 (MQ=255) ttcagcgcctgggagatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCCGCCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCgg < 1:254149‑M2/116‑1 (MQ=255) gTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCTGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTc < 7:312871/148‑1 (MQ=255) gTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTc < 2:145570/148‑1 (MQ=255) gatcgagcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACATTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGActggtg > 1:260365‑M2/19‑147 (MQ=255) atcgagcgcCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTAACTTTGTGTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTggtg > 2:210181/6‑146 (MQ=11) aTTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGcac < 2:187689/149‑1 (MQ=255) gaagcgccgcgcgggCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACag > 3:246629‑M2/16‑149 (MQ=255) ggCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACag > 4:106526/1‑147 (MQ=255) ggCGCCGCCCGCGCGGCGCTTCGCGGGTAAA‑CCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACaggag < 6:363447/149‑1 (MQ=255) gcgccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACaggag < 3:36277‑M2/137‑1 (MQ=255) gccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGc > 2:62115‑M2/11‑123 (MQ=255) ccgcccgcgCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGa < 3:106526‑M2/140‑1 (MQ=255) cgcgcgggCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGAt < 4:246629‑M2/141‑1 (MQ=255) cgcccgcGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGac > 1:223937/1‑148 (MQ=14) ccgcGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTgg > 7:264203/1‑149 (MQ=14) cgCGGCGCGTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCa < 3:140871‑M2/147‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGc < 8:232835/107‑1 (MQ=17) ttCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGc > 7:232835/1‑107 (MQ=17) gcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTg > 1:264385/1‑120 (MQ=11) cTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTACCAGCGGCTTTAccc < 7:51563‑M2/149‑4 (MQ=255) tACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCgg < 2:65929/140‑1 (MQ=255) tACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCgg > 1:65929/1‑140 (MQ=255) tACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccg < 7:243944‑M2/149‑5 (MQ=255) cGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgc > 6:359916‑M2/1‑143 (MQ=255) gtttgtttCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGTCAGAAACAAACGTAGGAGCGGGTTTAcccgcg < 8:109359‑M2/148‑7 (MQ=255) gtttgtttCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGTGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCcgcg > 3:97311/1‑147 (MQ=255) tttgtttCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcg < 3:314116‑M2/147‑7 (MQ=255) tttCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgc < 5:27263‑M2/149‑13 (MQ=255) tttCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcg < 1:149829‑M2/143‑7 (MQ=255) tttCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcg > 2:149829‑M2/1‑137 (MQ=255) tttCGGGCCAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTTCCCGCGAAGcgcc > 1:161416/1‑149 (MQ=11) ttCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGTCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgcc < 3:36786‑M2/149‑14 (MQ=255) cGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCgg < 7:218919/129‑1 (MQ=255) cGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCgg > 8:218919/1‑129 (MQ=255) ggCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGTCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgc > 7:109359‑M2/1‑132 (MQ=255) ccAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcggg > 2:88425/1‑149 (MQ=14) ccAATTATTCCTG‑CGGGATTTGCGCGCGACCG‑CCTTGGGGCATGTCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGACTGGTGCAGGAGGGACTGGCC‑GAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCgcgg > 1:56478/1‑148 (MQ=14) cAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccg < 6:33389‑M2/133‑5 (MQ=255) cAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccg > 5:33389‑M2/1‑129 (MQ=255) cTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTAcccgcgaagcgccgcgcgggcggcgctc < 5:15323‑M2/148‑29 (MQ=255) | GAGCTGGAGCGGTTGTTTGATTCGGATGCGGACTGAGGCCTTTTGGCGCGTGCCTTGAGGGTTGTAGTGCCTGTGAGATTGGGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAGTTATTCCTG‑TGGGACGCGCACGCGAGCC‑CCCTGGCGCACGCCTCGATATCGCGTCGTACAAACAAGGCGGTCGCGCGCGCCTGGCACAGGAGGGATTGGCCAGAAACAAACGTAGGAGCGGGTTTACCCGCGAAGCGCCGCGCGGGCGGCGCTC > NC_002947/5988671‑5988963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |