| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 431,350 | C→T | 7.6% | G322S (GGC→AGC) | PP_0354 ← | CBS domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 431,350 | 0 | C | T | 7.6% | 229.9 / 4.8 | 79 | G322S (GGC→AGC) | PP_0354 | CBS domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (35/37); new base T (4/2); total (40/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.58e-01 | |||||||||||
CGGCACGCCCGGGTCGCCACGTTCGGCCAGGGCCAGTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTCCACCAGGCAGACATGGGC > NC_002947/431204‑431494 | cGGCACGCCCGGGTCGCCACGTTCGGCCAGGGCCAGTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTcgccgc > 2:62489/1‑149 (MQ=255) cGCCCGGGTCGCCACGGTCGGCCAGGGCCAGTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGc < 3:179963/149‑1 (MQ=255) gCCCGGGTCGCCACGTTCGGCCAGGGCCAGTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGc > 3:92980/1‑148 (MQ=255) gTCGCCACGTTCGGCCAGGGCCAGTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAAc > 8:336664/1‑147 (MQ=255) cGCCACGTTCGGCCAGGGCCAGTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGGTTTCGCTGCGCGGCGAAATCAGc < 4:191406/149‑1 (MQ=255) cGCCACGTTCGGCCAGGGCCAGTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGc < 7:336664/149‑1 (MQ=255) gCCACGTTCGGCCAGGGCCAGTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCg > 2:110374/1‑149 (MQ=255) ccACGTTCGGCCAGGGCCAGTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCg > 7:7664/1‑148 (MQ=255) cACGTTCGGCCAGGGCCAGTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCTCAGCGCAGCGAAACCATCGTa > 8:162670/1‑149 (MQ=255) cGGCCAGGGCCAGTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAg < 8:7664/148‑1 (MQ=255) ggccagggccagTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAAcc > 2:221488/1‑136 (MQ=255) ggccagggccagTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAAcc < 1:221488/136‑1 (MQ=255) gccagggccagTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCg > 2:332196/1‑149 (MQ=255) agggccagTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTgg > 6:131511/1‑149 (MQ=255) ccagTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCa > 6:2358/1‑149 (MQ=255) gATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTa > 5:143565/1‑149 (MQ=255) gATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTa < 1:42296/149‑1 (MQ=255) gATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTa < 5:170545/149‑1 (MQ=255) gATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAAACAGCGTATCCAGGCGTGGCGCATGGCGTa > 5:155497/1‑149 (MQ=255) gATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGATGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTa > 5:105348/1‑149 (MQ=255) aCCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGt < 1:110374/149‑1 (MQ=255) acacGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTgcgcgc > 4:180480/1‑148 (MQ=255) acacGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTgcgcgc > 2:188043/1‑148 (MQ=255) tATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGa < 1:117813/149‑1 (MQ=255) tGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAAc < 4:92980/149‑1 (MQ=255) tGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAAc < 4:112256/149‑1 (MQ=255) tGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAAc < 1:332196/149‑1 (MQ=255) tGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAAc < 1:62489/149‑1 (MQ=255) ggTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAAc < 3:180480/148‑1 (MQ=255) gTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAAcc < 5:147695/148‑1 (MQ=255) gTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGAt < 3:214039/149‑1 (MQ=255) gCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTgcgc < 7:173643/128‑1 (MQ=255) gCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTgcgc > 8:173643/1‑128 (MQ=255) gTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCg < 2:40397/146‑1 (MQ=255) gTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCg > 1:40397/1‑146 (MQ=255) tAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTg > 6:104789/1‑148 (MQ=255) aTGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAg < 5:2358/149‑1 (MQ=255) aTGAACTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGGATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCTTATCCAGGCGTGGCGCATGGCGTATGTTGCGCGCCAGGTGAACCAGATCGACCCGTTGCa < 7:162670/148‑1 (MQ=255) ggTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGTTGAACCAGATCGACCCGTTGCAGGgag < 6:155497/145‑1 (MQ=255) ggTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGgaga < 4:310584/146‑1 (MQ=255) ggTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGaa > 2:228285/1‑147 (MQ=255) ggTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGaa > 1:82238/1‑147 (MQ=255) gTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAg < 6:264041/149‑1 (MQ=255) tGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAgg < 2:309055/149‑1 (MQ=255) cTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTTCAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTcgc > 2:149664/1‑149 (MQ=255) tGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTcgcg > 3:238264/1‑149 (MQ=255) gCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCgcgc > 1:272479/1‑149 (MQ=255) cGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCt < 1:228285/149‑1 (MQ=255) tCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAgg < 5:8455/140‑1 (MQ=255) tCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAgg > 6:8455/1‑140 (MQ=255) aTGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAAcc < 2:82238/149‑1 (MQ=255) cgcCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTAACCAGGCGTCGCGCATGGCGTATCGTGCCCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCAcg > 7:71571/1‑149 (MQ=255) aTGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACACGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCAcgccg > 7:318448/1‑148 (MQ=255) gCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAg < 2:272479/149‑1 (MQ=255) ccAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAgg > 7:205594/1‑149 (MQ=255) cAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAAc < 2:276960/118‑1 (MQ=255) cAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAAc > 1:276960/1‑118 (MQ=255) cATGCGTTCTACAAGCTGGCTGATTTCGCCGCCCAGCTAAACCAGCGTATCCAGGCGTGGCGCATGCCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGAGCTCGGAAAACACGCAGCACAGGCGTc > 2:208658/1‑149 (MQ=255) aTGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAGCCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTcc < 5:131511/149‑1 (MQ=255) aTGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGga < 8:307797/110‑1 (MQ=255) aTGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGga > 7:307797/1‑110 (MQ=255) gTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGttt < 1:188043/149‑1 (MQ=255) cTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTc > 1:296969/1‑148 (MQ=255) tACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTcc < 4:238264/148‑1 (MQ=255) aCAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTccac > 3:285512/1‑149 (MQ=255) aCAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTccac > 3:338375/1‑149 (MQ=255) aaGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTccacca < 1:149664/149‑1 (MQ=255) gctggctgATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTCCACCAgg < 2:296969/149‑1 (MQ=255) ctgGTTTCGCTGCGCGGCGAAATCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGATACCACGCCGCACAGGCGTCCGTTTTCCACCAGGCAGa > 7:132803/1‑148 (MQ=255) ctgGTTTCGCTGCGCGGCGAAATCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTCCACCAGGCAGa > 6:191348/1‑148 (MQ=255) ctgATTTCGCCTCGCAGCGTATCCTGCGTATCGAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACTGGTCGCGCTCGGAAACCACGCCGCACTGGCGTCCGTTTTCCACCAGGCAGAc < 8:71571/149‑1 (MQ=255) tggtttCGCTGCGCGGCGAAATCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTCCACCAGGCAGACa > 7:164034/4‑149 (MQ=255) tgATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCAcgc > 1:65581/1‑117 (MQ=255) tgATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCAcgc < 2:65581/117‑1 (MQ=255) gATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTCCACCAGGCAGACAt > 3:89867/1‑149 (MQ=255) gATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTCCACCAGGCAGACAt > 2:7808/1‑149 (MQ=255) gtttCGCTGCGCGGCGAAATCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGCGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTc < 7:102679/103‑1 (MQ=255) gtttCGCTGCGCGGCGAAATCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGCGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTc > 8:102679/2‑104 (MQ=255) aTTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGttt > 4:333997/1‑132 (MQ=255) aTTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGttt < 3:333997/132‑1 (MQ=255) cgccgcGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTCCACCAGGCAGACATGGGc < 5:104789/148‑1 (MQ=255) | CGGCACGCCCGGGTCGCCACGTTCGGCCAGGGCCAGTTCGATGACCCGGCACACGGTATGGTCGTTGAGCAAGGTAATGATCTGGGTGATCTGCGTCGACGATGCGCCATGGGCCAGCATGCGTTCTACAAGCTGGCTGATTTCGCCGCGCAGCGAAACCAGCGTATCCAGGCGTGGCGCATGGCGTATGGTGCGCGCCAGGTGAACCAGATCGACCCGTTGCAGGGAGAACAGGTCGCGCTCGGAAACCACGCCGCACAGGCGTCCGTTTTCCACCAGGCAGACATGGGC > NC_002947/431204‑431494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |