| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 558,477 | A→C | 5.3% | E21D (GAA→GAC) | rplR → | 50S ribosomal protein L18 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 558,477 | 0 | A | C | 5.3% | 226.0 / 3.5 | 76 | E21D (GAA→GAC) | rplR | 50S ribosomal protein L18 |
| Reads supporting (aligned to +/- strand): ref base A (33/39); new base C (2/2); total (35/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.55e-01 | |||||||||||
CCAGAGCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGCGGCCA > NC_002947/558330‑558625 | ccAGAGCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAAc < 3:20649/149‑1 (MQ=255)ccAGAGCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAAc < 4:214042/149‑1 (MQ=255) gCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGaa < 6:199005/149‑1 (MQ=255) ccTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAg < 7:250263/149‑1 (MQ=255) ttACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTc > 7:337997/1‑149 (MQ=255) cAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTg > 2:319375/1‑149 (MQ=255) aaaggtaaaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTgc > 4:63525/1‑149 (MQ=255) gtaaaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTgcatc > 6:100673/1‑145 (MQ=255) gtaaaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTgcatc < 5:100673/148‑4 (MQ=255) gtaaaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCg > 6:245304/1‑136 (MQ=255) gtaaaggtGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCg < 5:245304/136‑1 (MQ=255) gtgtGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCgt < 8:51844/149‑1 (MQ=255) gCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGtt < 1:319375/148‑1 (MQ=255) cGTTACGCGGACGAAGTAGTCCGTGGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTcc > 1:14829/1‑149 (MQ=255) gcgGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTgcat < 2:281119/130‑3 (MQ=255) gcgGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGACTTCGAGTTCGTgcat > 1:281119/1‑128 (MQ=255) gcgGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGctcct < 7:283106/149‑1 (MQ=255) gcgGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGctcct > 7:77796/1‑149 (MQ=255) cgGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGctcctc < 4:35019/149‑1 (MQ=255) aCGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCgca < 7:170836/149‑1 (MQ=255) aCGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAG‑TATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCgcag > 8:243079/1‑149 (MQ=255) cGAAGTAGTCCGTCGTAAAGACGCCAAGAAGAAGTTGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTGTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCgcag < 2:14829/149‑1 (MQ=255) agtagtCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGcac < 5:232709/149‑1 (MQ=255) gtagtCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGcaca < 1:158305/149‑1 (MQ=255) gtCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATc > 3:190482/1‑148 (MQ=255) cgtcgtAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTAc < 8:339189/148‑1 (MQ=255) tAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAg > 4:141384/1‑149 (MQ=255) cAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATc > 2:11782/1‑131 (MQ=255) cAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATc < 1:11782/131‑1 (MQ=255) aagaagaagTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCgg < 3:63525/149‑1 (MQ=255) gaagTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTc > 4:114087/1‑89 (MQ=255) gaagTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTc < 3:114087/89‑1 (MQ=255) gggCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTgc < 5:108546/87‑1 (MQ=255) gggCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTgc > 6:108546/1‑87 (MQ=255) gggCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGgcag > 8:318572/1‑148 (MQ=255) gggCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGgcag < 7:100440/148‑1 (MQ=255) gggCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGgcag < 3:275289/148‑1 (MQ=255) gggCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGgcag > 8:100440/1‑148 (MQ=255) gggCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCACCTCGCAGCACATCTACCCCCAGGTCATTACGGCCGACGgcag > 4:275289/1‑148 (MQ=255) ccTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAg > 3:204451/1‑149 (MQ=255) cTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAgg > 5:69703/1‑149 (MQ=255) aaTGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTgg < 7:318572/149‑1 (MQ=255) aaTGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTgg > 4:175404/1‑149 (MQ=255) aaTGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTgg < 7:246072/149‑1 (MQ=255) aaTGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTg < 8:51587/148‑1 (MQ=255) aTGACCTACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGc < 6:341201/149‑1 (MQ=255) cGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAgcg > 7:286398/1‑149 (MQ=255) cGACAAAAAAG‑TATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAgcgc < 7:243079/149‑1 (MQ=255) gACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAgcgc > 4:8497/1‑149 (MQ=255) aaaaaaGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTc < 4:204451/149‑1 (MQ=255) aaaaaGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCg < 5:94265/149‑1 (MQ=255) aaaaGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGa > 8:45663/1‑149 (MQ=255) aaaGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCAGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTACTGGCAACCGCCTAGa > 7:122570/1‑148 (MQ=255) gTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCtt > 5:175697/1‑149 (MQ=255) aTTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGa > 4:92960/1‑149 (MQ=255) aCTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCtt > 8:340298/1‑141 (MQ=255) aCTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCtt < 7:340298/141‑1 (MQ=255) gTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTg > 6:282034/1‑149 (MQ=255) tCGCGCTCTCAAAGGACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGc < 8:73545/149‑1 (MQ=255) tCGCGCTCGGATAGCACGTCTCAAGATTCAAGAACTCTAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGGACATCTACTCCCAGGTCATTTCGGCCGACGTCAGCAAGGTTCTGGCAAGCGCCTAGACCTTGGACAAAGACCTGc < 8:122570/149‑1 (MQ=255) cgcTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTg < 3:92960/149‑1 (MQ=255) gcTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGa < 4:190482/149‑1 (MQ=255) aaaGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCACGCGCCTCGACCTTGGACAAAGACCTGCGTGATGgcgc > 1:303571/1‑149 (MQ=255) aaaGAACGTCTCAAGATGCACGAACTAGAAGTCGTGCGCCTGTGCGTGTTACGCTCCTCCAAGCACATCTAAGCCCAGGTCATTTCGGCAGACGGCAGCAAGTTTCAGGCAAGACACTCGACCTTGGACAAATACCTTCGTGATGgcg > 3:349767/1‑148 (MQ=255) aaGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGgcgc > 4:295295/1‑148 (MQ=255) cACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACt < 3:295295/149‑1 (MQ=255) aCGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTg < 6:69703/149‑1 (MQ=255) tctcAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCgg < 8:249164/80‑1 (MQ=255) tctcAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCgg > 7:249164/1‑80 (MQ=255) cAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGc < 2:240715/128‑1 (MQ=255) cAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGc > 1:240715/1‑128 (MQ=255) gCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGAcg > 5:357714/1‑149 (MQ=255) cACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTg > 2:323687/1‑108 (MQ=255) cACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTg < 1:323687/108‑1 (MQ=255) gAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGCGGc < 8:77796/149‑1 (MQ=255) gAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTAATTTCGGCCGACGTCAGCAAGGTTCTGGCAAGCGCCTCGACCTTTGACAAAGAACTGCGTGATGGCGCCACTGGCAACATCGACGCGGc < 4:349767/149‑1 (MQ=255) aCTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGCGGCCa < 7:45663/149‑1 (MQ=255) | CCAGAGCCTTACAAAGGTAAAGGTGTGCGTTACGCGGACGAAGTAGTCCGTCGTAAAGAAGCCAAGAAGAAGTAGGGCCTAGTAAATGACCGACAAAAAAGTTATTCGACTGCGTCGCGCTCGCAAAGCACGTCTCAAGATGCACGAACTCGAAGTCGTGCGCCTGTGCGTGTTCCGCTCCTCGCAGCACATCTACGCCCAGGTCATTTCGGCCGACGGCAGCAAGGTTCTGGCAAGCGCCTCGACCTTGGACAAAGACCTGCGTGATGGCGCCACTGGCAACATCGACGCGGCCA > NC_002947/558330‑558625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |