| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 919,672 | G→C | 8.7% | intergenic (‑143/+48) | PP_5458 ← / ← PP_0800 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 919,672 | 0 | G | C | 8.7% | 211.7 / 9.9 | 69 | intergenic (‑143/+48) | PP_5458/PP_0800 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (30/33); new base C (3/3); total (33/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.05e-01 | |||||||||||
GGACATTTGAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCAAGG > NC_002947/919524‑919820 | ggACATTTGAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCgg > 5:292754/1‑149 (MQ=255) gACATTTGAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCgg < 8:79342/148‑1 (MQ=255) aaCTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGccc < 1:72186/148‑1 (MQ=255) aaCTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGccc < 4:150114/148‑1 (MQ=255) aCTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCg > 8:69334/1‑149 (MQ=255) cttcttGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGc > 5:69337/1‑147 (MQ=255) cttcttGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGc > 7:80523/1‑147 (MQ=255) attGGGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAgg < 1:307155/147‑1 (MQ=255) gCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAggg < 4:344033/146‑1 (MQ=255) tGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGGACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAggg > 3:74926/1‑149 (MQ=255) tAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGgcgc > 8:324566/1‑149 (MQ=255) tAATGAGGACAGGGGTAAAGATAGTCCTTTCAGTGCACTCGAAACAGAGAGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGgcgc > 7:197629/1‑149 (MQ=255) aTGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAgg < 3:161694/143‑1 (MQ=255) aTGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAgg > 4:161694/1‑143 (MQ=255) ggACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCtt < 2:165668/149‑1 (MQ=255) aCAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTgg < 1:323207/149‑1 (MQ=255) gggTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAgg > 8:181111/1‑149 (MQ=255) gggTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAgg > 3:48813/1‑149 (MQ=255) ggTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAggg < 8:270085/133‑1 (MQ=255) ggTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAggg > 7:270085/1‑133 (MQ=255) gTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGc > 3:339372/1‑148 (MQ=255) gTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGc > 4:186054/1‑148 (MQ=255) tAAATTTTGTACTTTCTGTGCACTCCAATCAGAGGGTAGTGCGATAATCACTGTTGCGCAAAAGGTATCGATCATTGGGTGGAAGAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTa < 8:197629/149‑1 (MQ=255) atctCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAAcc < 7:180468/146‑1 (MQ=255) aGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGCCGAAAGcccc > 7:330193/1‑102 (MQ=255) aGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGCCGAAAGcccc < 8:330193/102‑1 (MQ=255) gTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGa < 7:69334/149‑1 (MQ=255) tCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACATCGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTTGAAACCGAt < 8:257548/149‑1 (MQ=255) ccTTTCAGTGCACTCAAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTgg > 7:92654/1‑132 (MQ=255) ccTTTCAGTGCACTCAAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTgg < 8:92654/132‑1 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAAcc > 8:180468/1‑144 (MQ=255) tttCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATa > 3:204490/1‑147 (MQ=255) tCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAg < 8:80523/148‑1 (MQ=255) tCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAg < 4:339372/148‑1 (MQ=255) cAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACTGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAgg < 1:61004/148‑1 (MQ=255) aaaCAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGgcgc < 4:141125/108‑1 (MQ=255) aaaCAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGgcgc > 3:141125/1‑108 (MQ=255) agCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGttt > 5:31095/1‑149 (MQ=255) agCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGttt > 5:17831/1‑149 (MQ=255) aGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATgg < 7:324566/149‑1 (MQ=255) gTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATggg < 6:31095/149‑1 (MQ=255) tGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGt > 5:189313/1‑149 (MQ=255) cGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTtg > 3:161546/1‑149 (MQ=255) gATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTtgt < 7:181111/149‑1 (MQ=255) cTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAAc < 4:296898/149‑1 (MQ=255) ttGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAAcc > 5:223019/1‑147 (MQ=255) aaaGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTg < 6:69337/149‑1 (MQ=255) aGGTAACGATGATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCa < 4:48813/149‑1 (MQ=255) tAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCgg < 4:213491/111‑1 (MQ=255) tAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCgg > 3:213491/1‑111 (MQ=255) tAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGc > 8:289330/1‑149 (MQ=255) aCGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGta < 7:266607/100‑1 (MQ=255) aCGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGta > 8:266607/1‑100 (MQ=255) cATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATgg < 8:59217/114‑1 (MQ=255) cATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATgg > 7:59217/1‑114 (MQ=255) ttGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGTAAGCTTGCCGt > 2:215698/1‑147 (MQ=255) ttGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCa < 6:189313/149‑1 (MQ=255) ggTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAgcg > 5:70904/1‑149 (MQ=255) acaacGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCt < 1:164500/125‑1 (MQ=255) acaacGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCt > 2:164500/1‑125 (MQ=255) acaacGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCAt < 4:204490/149‑1 (MQ=255) caacGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATc < 4:161546/149‑1 (MQ=255) acGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCt > 3:166283/1‑149 (MQ=255) ggggCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGc < 6:17831/149‑1 (MQ=255) ggggCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGtt < 3:240883/101‑1 (MQ=255) ggggCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGtt > 4:240883/1‑101 (MQ=255) gggCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGca < 7:289330/149‑1 (MQ=255) ggCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCaa > 6:320118/1‑122 (MQ=255) ggCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCaa < 5:320118/122‑1 (MQ=255) tttCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATg > 2:269358/1‑149 (MQ=255) cGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCa < 4:166283/148‑1 (MQ=255) gCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCAAgg > 6:161797/1‑149 (MQ=255) | GGACATTTGAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCAAGG > NC_002947/919524‑919820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |