| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 64,006 | G→T | 6.9% | P237H (CCC→CAC) | PP_0055 ← | transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 64,006 | 0 | G | T | 6.9% | 223.9 / 4.4 | 70 | P237H (CCC→CAC) | PP_0055 | transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (31/34); new base T (3/2); total (34/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCGCACAACGCCAGCAGGTAGTCCCACACCACCCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGAAACAGCAGTTCCTGGCTGAACAGCAAATCGTCAACGTAGCCG > NC_002947/63858‑64149 | cgcgCACAACGCCAGCAGGTAGTCCCACACCACCCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTgg > 4:89265/1‑149 (MQ=255) gcACAACGCCAGCAGGTAGTCCCACACCACCCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTggg > 2:356048/1‑147 (MQ=255) gcACAACGCCAGCAGGTAGTCCCACACCACCCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTggg > 3:182177/1‑147 (MQ=255) acaACGCCAGCAGGTAGTCCCACACCACCCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGgcagc < 4:182177/149‑1 (MQ=255) acaACGCCAGCAGGTAGTCCCACACCACCCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGgcag > 5:216561/1‑148 (MQ=255) acaACGCCAGCAGGTAGTCCCACACCACCCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGgcag > 7:187352/1‑148 (MQ=255) cagGTAGTCCCACACCACCCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGc > 8:190852/1‑149 (MQ=255) agGTAGTCCCACACCACCCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGcc < 7:190852/149‑1 (MQ=255) ccACACCACCCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCgg > 4:243723/1‑149 (MQ=255) accaccCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGgc > 3:73724/1‑123 (MQ=255) accaccCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGgc < 4:73724/123‑1 (MQ=255) accCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCgcgggc > 6:157138/1‑149 (MQ=255) ccGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGgca > 2:178760/1‑119 (MQ=255) ccGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGgca < 1:178760/119‑1 (MQ=255) ccGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCgcgggcgg > 5:81540/1‑149 (MQ=255) gCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGggcggcg > 3:170579/1‑149 (MQ=255) gcgcACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCtt < 8:210134/149‑1 (MQ=255) gcgcACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCtt > 5:269152/1‑149 (MQ=255) cacaGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCCCCAGGGTGGGGGCGTGGCGGGCCATGTAGTTGGGCAGCACCGCGCTGCCCAGCCCGGCGGGGGCGGGGGCGTggt > 6:198850/1‑147 (MQ=255) gtcTTGTGCAGCTCGCGGCGGGTTCAGATCCAGTAGCTGCGCTACCCCAGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTggg < 1:119651/147‑1 (MQ=255) gACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGc < 8:263095/149‑1 (MQ=255) aCTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATACCCAGCCCGGCGCGGGCGGCGGCTTGCTg > 2:207263/1‑145 (MQ=255) aCTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATACCCAGCCCGGCGCGGGCGGCGGCTTGCTg < 1:207263/145‑1 (MQ=255) ttGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGAt > 8:59643/1‑149 (MQ=255) gtgCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATc < 1:129982/148‑1 (MQ=255) gtgCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATc > 2:129982/1‑148 (MQ=255) gtgCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCa > 4:262813/1‑149 (MQ=255) cAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGc > 7:136721/1‑149 (MQ=255) gCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTg < 3:243723/149‑1 (MQ=255) tCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGt > 2:314291/1‑149 (MQ=255) gcggGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCGAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTc < 6:81540/149‑1 (MQ=255) gggTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGa < 8:136721/149‑1 (MQ=255) gggTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGa < 6:296041/149‑1 (MQ=255) gggTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGa < 7:260388/149‑1 (MQ=255) ggTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGa > 6:91864/1‑148 (MQ=255) cAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAacac < 6:331087/149‑1 (MQ=255) cAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAaca < 6:216561/148‑1 (MQ=255) aGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAacac > 3:187030/1‑148 (MQ=255) aGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAacac > 8:13391/1‑148 (MQ=255) aGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAAcacc < 7:59643/149‑1 (MQ=255) aTCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAAcaccac > 4:280589/1‑149 (MQ=255) tCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGTGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACg > 5:126782/1‑149 (MQ=255) tCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGTGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACg > 5:140342/1‑149 (MQ=255) ccAGTAGCTGCGCT‑GGATGGTTTCACCCGGCAGCACGCGCACCAGTGTCTGGTCGTGGCGTGCCAAGTAGTTGTGCAGCACGGCGATGCCCAGCCCACCGCCGGCGGCGGCTTGCTGTGCGATCACGCTCGTGCATCGAAACACCACGt > 8:78729/1‑149 (MQ=255) gTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGTGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTgg < 6:140342/149‑1 (MQ=255) gTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGTGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTgg < 6:126782/149‑1 (MQ=255) gTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTggg > 5:342845/1‑116 (MQ=255) gTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTggg < 6:342845/116‑1 (MQ=255) gTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTgg < 6:269152/149‑1 (MQ=255) cgcT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTc < 3:262813/148‑1 (MQ=255) cgcT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCg < 3:280589/149‑1 (MQ=255) gATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGTTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAg > 6:111380/1‑148 (MQ=255) gATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCGGGTGCTTCGAAACACCACGTTGGGTACTCGGCAg > 2:277244/1‑148 (MQ=255) tGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGAt < 5:62051/70‑1 (MQ=255) tGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGAt > 6:62051/1‑70 (MQ=255) tGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGTGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGaaa < 5:154308/149‑1 (MQ=255) tttCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGGCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTg < 4:19148/149‑1 (MQ=255) tttCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTg > 1:85231/1‑149 (MQ=255) tctcCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGt < 7:13391/148‑1 (MQ=255) ctcCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGtt < 4:37375/148‑1 (MQ=255) ccGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTga < 2:85231/147‑1 (MQ=255) ccGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTg < 1:40706/146‑1 (MQ=255) caCGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGAAAcagca < 1:356048/149‑1 (MQ=255) cgcgCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTg < 6:63901/116‑1 (MQ=255) cgcgCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTg > 5:63901/1‑116 (MQ=255) aCCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGaaa < 3:56391/137‑1 (MQ=255) aCCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGaaa > 4:56391/1‑137 (MQ=255) aCCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGAAAcag < 3:233164/140‑1 (MQ=255) aCCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGAAAcag > 4:233164/1‑140 (MQ=255) ggCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGAAAcagcag > 2:123224/1‑127 (MQ=255) gggCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATAACGCTGGTGCTGCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGATACAGCAGTTCCTGGCAGAACAGCAAATCGTc > 8:339547/1‑148 (MQ=255) tAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGAAACAGCAGTTCCTGGCTGAACAGCAAATCGTCAACGTAGc < 4:170579/148‑1 (MQ=255) gTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGAAACAGCAGTTCCTGGCTGAACAGCAAATCGTCAACGTAGCCg < 5:91864/148‑1 (MQ=255) ggCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGc > 4:119848/1‑88 (MQ=255) ggCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGc < 3:119848/88‑1 (MQ=255) ggCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGAAACAGCAGTTCCTGGCTGAACAGCAAATCGTc > 1:333614/1‑134 (MQ=255) ggCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGAAACAGCAGTTCCTGGCTGAACAGCAAATCGTc < 2:333614/134‑1 (MQ=255) | CGCGCACAACGCCAGCAGGTAGTCCCACACCACCCGCAGGCGCACAGACTTGTGCAGCTCGCGGCGGGTGCAGATCCAGTAGCTGCGCT‑GGATGGTTTCTCCCGGCAGCACGCGCACCAGTGTCGGGTCGTGGCGGGCCATGTAGTTGGGCAGCACGGCGATGCCCAGCCCGGCGCGGGCGGCGGCTTGCTGGGCGATCACGCTGGTGCTTCGAAACACCACGTTGGGTACTCGGCAGAAACTGTTGAGAAACAGCAGTTCCTGGCTGAACAGCAAATCGTCAACGTAGCCG > NC_002947/63858‑64149 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |