| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,267,257 | A→G | 5.5% | L244P (CTG→CCG) | quiP ← | acyl‑homoserine lactone acylase QuiP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,267,257 | 0 | A | G | 5.5% | 216.2 / 2.1 | 72 | L244P (CTG→CCG) | quiP | acyl‑homoserine lactone acylase QuiP |
| Reads supporting (aligned to +/- strand): ref base A (33/35); new base G (2/2); total (35/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.30e-01 | |||||||||||
GTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGCTACCGGCTTTCTGCGCCAGGGTCAGGGCGCT > NC_002947/1267111‑1267402 | gTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAg < 3:214063/148‑1 (MQ=255) ccGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCt < 5:308198/149‑1 (MQ=255) gggCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTgg < 5:200327/149‑1 (MQ=255) tCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGc > 3:95374/1‑149 (MQ=255) gCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCgg < 3:90995/149‑1 (MQ=255) gCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCgg > 5:298073/1‑149 (MQ=255) ccAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGc > 4:242192/1‑148 (MQ=255) ggcggcGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAAc > 7:216685/1‑148 (MQ=255) ggcggcGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAAc < 8:216685/148‑1 (MQ=255) cggcgcggcTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGGCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAActgg < 8:151651/149‑1 (MQ=255) ggcgcggcTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAActggc < 7:30890/149‑1 (MQ=255) tCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGt < 8:260264/148‑1 (MQ=255) cTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAgcgacag > 8:266997/1‑143 (MQ=255) cTGGCCAGCAGGATCTTGCCGCGGCGGCGGCGCTGCGTACCCAGGGCCAGTTTGGCCGAGCCCGGGCTACCGAGCAGGTCTAGGTCGGCCAGCTTCTGTCTGGCAGCCGCCAGGGGTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAg < 4:167003/149‑1 (MQ=255) agcagGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGGCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCtt < 6:298073/149‑1 (MQ=255) ccggCGCTGGCCGCTGGGGCTGCGCGGCGGACCGCGGGCCAGGTGGGCCGACCCCGGGCTACGGAGCAGGTCGTGGGCGGCCAGCTTCTGGCGGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGa < 6:36680/147‑1 (MQ=255) gCTCTTGCCGCTGCGGCTGCGCTGCGGACCCA‑GGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCGGGCAGCCGCCAGGGCTGGCAGGCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCtt < 3:255347/149‑1 (MQ=255) ctctTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCtt < 5:260637/149‑1 (MQ=255) ctTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGt < 3:84614/149‑1 (MQ=255) ctTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGt > 1:132564/1‑149 (MQ=255) ttGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTc > 3:310820/1‑149 (MQ=255) ttGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTc > 4:228735/1‑149 (MQ=255) ttGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTc > 7:190316/1‑149 (MQ=255) gCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGt < 3:79834/146‑1 (MQ=255) ccGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCAc < 8:190316/149‑1 (MQ=255) cGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACt > 4:314641/1‑149 (MQ=255) cGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACt < 3:314641/149‑1 (MQ=255) gctgcggctgcgCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACtt > 4:107486/1‑149 (MQ=255) cggctgcgCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCa < 4:95374/148‑1 (MQ=255) gctgcgGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGc > 4:25060/1‑148 (MQ=255) gACCCAGGGCCAGGTTGGCCGCCCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCAGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGGTCAGGCCCTTGACCTTGTCCACTTCCATTTCGGcagatcg > 5:192177/1‑142 (MQ=255) gACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGc < 2:132564/149‑1 (MQ=255) cccAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTc > 7:72220/1‑149 (MQ=255) ccAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCgg < 5:67533/138‑1 (MQ=255) ccAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCgg > 6:67533/1‑138 (MQ=255) ccAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCg > 2:290705/1‑149 (MQ=255) aGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTc > 3:240435/1‑149 (MQ=255) aGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTc < 4:240435/149‑1 (MQ=255) aGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTc > 7:153936/1‑149 (MQ=255) ccAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCggg < 3:242192/149‑1 (MQ=255) ccGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCggg > 7:147691/1‑148 (MQ=255) cGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGgca < 8:153936/149‑1 (MQ=255) cGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCAAGGTTCAGGCCCTTGAGCGTGTCGACTTCCAGTTCGGCCAACGGCTCGTCCGGGGCCGCggg > 4:94416/1‑147 (MQ=255) cGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAAc > 4:118232/1‑148 (MQ=255) cTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGc < 3:107486/149‑1 (MQ=255) tACCTAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGcc < 3:228735/149‑1 (MQ=255) tACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGc > 5:231540/1‑148 (MQ=255) ccGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAg > 4:224597/1‑149 (MQ=255) cGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCAGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTACACTTCCAATTCTGCAAACTCCTCGTCCGGGGCACCGGGCAGCAACCAGGCCAGc > 8:239983/1‑149 (MQ=255) aggtcgaggtcgGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTc < 3:118232/149‑1 (MQ=255) aggtcgaggtcgGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTc < 8:147691/149‑1 (MQ=255) aggtcgaggtcgGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTc < 4:310820/149‑1 (MQ=255) gtcgaggtcgGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGc > 3:105484/1‑149 (MQ=255) cgGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGCTACCGGCt < 3:224597/149‑1 (MQ=255) ccAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCATTTCCATTTCGGc < 7:255849/91‑1 (MQ=255) ccAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCATTTCCATTTCGGc > 8:255849/1‑91 (MQ=255) gCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGCTACCGGCTTTCTgc < 4:105484/149‑1 (MQ=255) gccggggctgccAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCCGCAACCAGGCCAGCGTGTCGCTACCGGCTTTCTgcg > 4:197169/6‑149 (MQ=255) gctggcAGCGGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACg < 3:313845/86‑1 (MQ=255) gctggcAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGCTACCGGCTTTCTGCGCCAggg > 3:60972/1‑149 (MQ=255) gctggcAGCAGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACg > 4:313845/1‑86 (MQ=255) ggcAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCGTTGAGGTTGTCCGCTTGCATTTCGGCCTACGGCTCGTCCGAGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGCTACCGGCTTTCTGCGCCAGGGt > 7:282738/1‑147 (MQ=255) gcAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGCTACCGGCTTTCTGCGCCAGGGTCa < 8:72220/148‑1 (MQ=255) aGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGCTACCGGCTTTCTGCGCCAGGGTCa > 6:176884/1‑146 (MQ=255) aGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGCTACCGGCTTTCTGCGCCAGGGTCa < 5:176884/146‑1 (MQ=255) tgccGGGGCTGCCAGCCCTGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTc > 7:313585/2‑84 (MQ=39) tgccGGGGCTGCCAGCCCTGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTc > 7:308903/2‑84 (MQ=39) tgccGGGGCTGCCAGCCCTGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTc < 8:308903/83‑1 (MQ=39) tgccGGGGCTGCCAGCCCTGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTc < 8:313585/83‑1 (MQ=39) gccAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTACAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGCTACCGGCTTTCTGCGCCAGGGTCAGGGCGCt > 1:245376/1‑149 (MQ=255) ccAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGCTAc < 4:276193/120‑1 (MQ=255) ccAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGCTAc > 3:276193/1‑120 (MQ=255) | GTACCGGGCTCAAGGCCCAGGCGGCGCGGCTGTCGCTGGCCAGCAGGCTCTTGCCGCTGCGGCTGCGCTGCGGACCCAGGGCCAGGTTGGCCGACCCCGGGCTACCGAGCAGGTCGAGGTCGGCCAGCTTCTGGCTGGCAGCCGCCAGGGCTGGCAGCCCCGGCAACTGGCTGGCCAGGTTCAGGCCCTTGAGCTTGTCCACTTCCATTTCGGCCAACGGCTCGTCCGGGGCCCCGGGCAGCAACCAGGCCAGCTTGTCGCTACCGGCTTTCTGCGCCAGGGTCAGGGCGCT > NC_002947/1267111‑1267402 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |