| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,274,851 | T→A | 5.9% | intergenic (‑48/+264) | PP_5462 ← / ← PP_5463 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,274,851 | 0 | T | A | 5.9% | 212.4 / 2.4 | 68 | intergenic (‑48/+264) | PP_5462/PP_5463 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (32/32); new base A (2/2); total (34/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
CCCGCTGATGTGGTAGCGGCATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGT > NC_002947/1274709‑1274998 | cccGCTGATGTGGTAGCGGCATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATg > 1:324854/1‑148 (MQ=255) cGCTGATGTGGTAGCGGCATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGc > 5:162878/1‑147 (MQ=255) cGCTGATGTGGTAGCGGCATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCaa < 7:15392/149‑1 (MQ=255) gCTGATGTGGTAGCGGCATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAg < 8:17658/149‑1 (MQ=255) gtgGTAGCGGCATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTAGGATGCAAGGAGCCt > 3:172344/1‑149 (MQ=255) gtgGTAGCGGCATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTAGGATGCAAGGAGCCt > 3:166738/1‑149 (MQ=255) ggTAGCGGCATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTc < 6:162878/148‑1 (MQ=255) ggCATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTAGGATGCAAGGAGCCTCATGGctt < 4:172344/149‑1 (MQ=255) ggCATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTAGGATGCAAGGAGCCTCATGGctt < 4:166738/149‑1 (MQ=255) gCATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGcttc > 3:18171/1‑149 (MQ=255) cATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGcttct > 8:36911/1‑149 (MQ=255) gAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCttctttct > 5:149014/1‑149 (MQ=255) gAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCttctttct < 6:262206/149‑1 (MQ=255) aCCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTg < 2:324854/148‑1 (MQ=255) ccTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGtt < 7:6561/149‑1 (MQ=255) cTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCttcttt > 5:97267/1‑143 (MQ=255) cTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCttcttt < 6:97267/143‑1 (MQ=255) gTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGc < 7:36911/147‑1 (MQ=255) ccGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTc > 7:212040/1‑147 (MQ=255) ttCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTc > 7:130893/1‑149 (MQ=255) ggAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCg < 4:18171/148‑1 (MQ=255) gAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCa > 2:28614/1‑149 (MQ=255) gAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATCGCTTCTTTCTGTTGCGTCAAGGTCCGCa > 1:26672/1‑149 (MQ=255) aaCGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAg < 7:53025/110‑1 (MQ=255) aaCGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAg > 8:53025/1‑110 (MQ=255) aTTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCAtcttc < 8:130893/149‑1 (MQ=255) ttCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCg < 1:134112/131‑1 (MQ=255) ttCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCg > 2:134112/1‑131 (MQ=255) tCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCtg > 3:232671/1‑149 (MQ=255) cATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCtg < 1:28614/148‑1 (MQ=255) aTTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCtgtg > 7:208436/1‑149 (MQ=255) aTTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCtgt < 4:120676/148‑1 (MQ=255) ttttCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTgtgg > 1:358593/1‑149 (MQ=255) tATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGc > 3:278236/1‑149 (MQ=255) aTGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGcc < 4:278236/149‑1 (MQ=255) tgctgGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAAt > 3:228728/1‑149 (MQ=255) gctgGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAAtt > 3:153546/1‑149 (MQ=255) ctgGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAAt < 4:232671/147‑1 (MQ=255) ataaCGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCg < 2:358593/148‑1 (MQ=255) aCGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCt > 5:13105/1‑149 (MQ=255) aaTCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTc > 8:135440/1‑147 (MQ=255) aaTCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCa < 6:13105/149‑1 (MQ=255) ttttGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCtt < 3:79086/56‑1 (MQ=255) ttttGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCtt > 4:79086/1‑56 (MQ=255) ttttGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCg > 4:113643/1‑148 (MQ=255) gCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCACCAGTGCGAATgg > 7:218803/1‑149 (MQ=255) cATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAAt > 5:283121/1‑122 (MQ=255) cATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAAt < 6:283121/122‑1 (MQ=255) ttGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGc < 6:255572/108‑1 (MQ=255) ttGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGc > 5:255572/1‑108 (MQ=255) aGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTg < 6:149014/148‑1 (MQ=255) ttCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCa < 7:218861/104‑1 (MQ=255) ttCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCa > 8:218861/1‑104 (MQ=255) ccTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTAt > 4:49380/1‑149 (MQ=255) ggCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATcc < 8:212040/147‑1 (MQ=255) cAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGctt > 3:259182/1‑55 (MQ=255) cAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGctt < 4:259182/55‑1 (MQ=255) gATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGgag < 4:228728/148‑1 (MQ=255) agtagtagtCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGaa < 3:113643/148‑1 (MQ=255) agtagtagtCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGa < 8:208436/147‑1 (MQ=255) tagtagtCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGt > 6:1796/1‑149 (MQ=255) gtCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAAt < 6:63256/142‑1 (MQ=255) gtCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAAt > 5:63256/1‑142 (MQ=255) gtCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGaa < 7:135440/148‑1 (MQ=255) aCTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCt > 8:66799/1‑147 (MQ=255) aCTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCt < 7:66799/147‑1 (MQ=255) aaTGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGagag > 3:128447/1‑129 (MQ=255) aaTGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGagag < 4:128447/129‑1 (MQ=255) aTGCTTGTTTGCATGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCGAGTGCGAATGGGCATTTTGGTCTATCcggcg < 4:92018/123‑1 (MQ=255) aTGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTCCGTCAAGGTCCGCATCTACTGTGCTGTGCCAGGATAATTCGTTCCCGGCCTCCAGTCCGAATGCGCATTTTGGTCTATCcggcg > 3:92018/1‑123 (MQ=255) ttGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGt > 2:207426/1‑149 (MQ=255) | CCCGCTGATGTGGTAGCGGCATAGAACCTAGTACCGATTCGGAACGATTCATTTTCTATGGGGACTGCTGGAATAATAACGAATCTCTTTTGCATTTTTGAGCTTCCTTGGCAGTGATCTAAGTAGTAGTCAGACTAATGCTTGGATGCAAGGAGCCTCATGGCTTCTTTCTGTTGCGTCAAGGTCCGCATCTTCTGTGGTGTGCCAGGAGAATTCGTTCCCGGCCTCCAGTGCGAATGGGCATTTTGGTCTATCCGGCGGAGAGTGAATGTCGAAGCCTGCTTCCCGGT > NC_002947/1274709‑1274998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |