| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,567,257 | A→T | 12.3% | intergenic (+61/‑260) | pcaR → / → pcaK | pca regulon transcriptional regulator/4‑hydroxybenzoate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,567,257 | 0 | A | T | 12.3% | 180.1 / 13.6 | 71 | intergenic (+61/‑260) | pcaR/pcaK | pca regulon transcriptional regulator/4‑hydroxybenzoate transporter |
| Reads supporting (aligned to +/- strand): ref base A (30/32); new base T (7/2); total (37/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGGGTGACCCGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCACCCG > NC_002947/1567110‑1567403 | cgggTGACCCGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATa > 7:261421/1‑148 (MQ=255) gTGACCCGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACg < 2:91513/149‑1 (MQ=255) aCTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGca < 8:128140/137‑1 (MQ=255) aCTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGca > 7:128140/1‑137 (MQ=255) gAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCggg < 3:132475/148‑1 (MQ=255) gTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAGCCCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGc < 1:89303/149‑1 (MQ=255) ttCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGt < 1:96627/149‑1 (MQ=255) ttGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCAc > 7:220705/1‑149 (MQ=255) ttGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCAc > 5:369609/1‑149 (MQ=255) cGATTTTGCTTGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGAGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGcaca < 7:27616/119‑1 (MQ=255) cGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGACCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCTATAAACGcaca > 8:27616/1‑119 (MQ=255) aTTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTcggc < 3:318063/149‑1 (MQ=255) ttttGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTcggcc > 2:263126/1‑149 (MQ=255) tGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTcggccggc > 4:302541/1‑149 (MQ=255) gCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCt > 6:182520/1‑149 (MQ=255) tGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGa > 8:18997/1‑149 (MQ=255) cagccagcCGGGACCTTTGCCACCAGTTTTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCAGGCTGAtt > 1:204237/1‑148 (MQ=255) cagccagcCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGGGAATTGCGTCACCTCGGCCGGCTGATTa < 7:288847/149‑1 (MQ=255) agccagccGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTaa > 1:148532/1‑149 (MQ=255) agccagccGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTaa < 1:48553/149‑1 (MQ=255) cagccGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGt < 3:42337/149‑1 (MQ=255) gccGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGtct < 3:107172/149‑1 (MQ=255) cGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGtctct > 1:55090/1‑149 (MQ=255) gggACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAAt < 5:143403/142‑1 (MQ=255) gggACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAAt > 6:143403/1‑142 (MQ=255) gggACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGtctctc < 2:148532/149‑1 (MQ=255) caccaGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCTTTTCCTGTGCGATAAAAGCACAGTGTCGTGACGGGTGAATTGCGTCACCTCGGCAGGCTGATTAATGTCTCTCGCAACGGTCgg > 2:106273/1‑149 (MQ=255) ccaGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCt < 8:261421/149‑1 (MQ=255) caGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTAGGCAGGCTGATTAATGTCTCTCGAAACGGTCGGCTa > 3:216211/1‑149 (MQ=255) gttgttTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGc > 3:113714/1‑149 (MQ=255) gttgttTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGc > 7:13595/1‑149 (MQ=255) ttGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccgaccgttg < 2:204237/149‑4 (MQ=255) agaCCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccgaccgttgcg < 7:18997/148‑6 (MQ=255) agaCCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAg < 8:220705/149‑1 (MQ=255) ccGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑aa < 2:55090/148‑1 (MQ=255) cGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACaa > 4:263703/1‑144 (MQ=255) cGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACaa < 3:263703/144‑1 (MQ=255) cGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑aaa > 4:93958/1‑148 (MQ=255) gCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccgacc > 4:334332/1‑137 (MQ=255) aGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccgacc > 1:82701/1‑131 (MQ=255) aGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccgacc < 2:82701/131‑1 (MQ=255) cACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTagag < 8:13595/149‑1 (MQ=255) cTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAg < 1:142386/134‑1 (MQ=255) ggCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGccgacc < 8:138805/121‑1 (MQ=255) ggCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑‑AAAACACTAGAGGcactcac > 5:240641/1‑148 (MQ=255) ggCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGAAACGGTCGGCTAGccgacc > 7:138805/1‑121 (MQ=255) cccGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCActcactca < 3:302541/149‑1 (MQ=255) aGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACt < 5:182520/149‑1 (MQ=255) aaCAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGt > 7:324439/1‑149 (MQ=255) aG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCAc < 6:369609/149‑1 (MQ=255) aaaaCCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATAc < 5:82412/139‑1 (MQ=255) aaaaCCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATAc > 6:82412/1‑139 (MQ=255) aaaaCCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCg > 1:148712/1‑149 (MQ=255) aaaaCCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCg > 1:171175/1‑149 (MQ=255) aaaaCCGTTTCCTGTGCGATAAACACACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCAt > 3:136581/1‑133 (MQ=255) aaaaCCGTTTCCTGTGCGATAAACACACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCAt < 4:136581/133‑1 (MQ=255) gacacTGTGCGTTTATCGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCtgctgc > 5:73285/5‑149 (MQ=255) gacacTGTGCGTTTATCGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCtgctgc > 6:156796/5‑149 (MQ=255) gacacTGTGCGTTTATCGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCtgctgc > 3:278191/5‑149 (MQ=255) gacacTGTGCGTTTATCGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCtgctgc > 4:133299/5‑149 (MQ=255) acacTGTGCGTTTATCGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCtgctgc > 2:234818/4‑149 (MQ=255) acacTGTGCGTTTATCGCACAGTGTCGTGCCGGGTCAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGCACAAG‑AAAAACACTAGAGGCACTCACTCATGAAGACTGTCACATCCCTGCTGCg > 4:299838/4‑149 (MQ=255) ccTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCgg < 2:171175/148‑1 (MQ=255) cTGTGCGTTTATCGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAGAAAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGc < 1:234818/149‑1 (MQ=255) cTGTGCGTTTATCGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGcc < 4:278191/149‑1 (MQ=255) cTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGcc < 4:314888/149‑1 (MQ=255) tgtgCGTTTATCGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCg > 4:326954/1‑149 (MQ=255) tgtgCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCg > 2:166546/1‑149 (MQ=255) gCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCa < 3:93958/148‑1 (MQ=255) cGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGTGGCCGCAcc > 5:25260/1‑149 (MQ=255) gATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCAccc < 4:113714/149‑1 (MQ=255) tAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCACCCg > 7:77558/1‑148 (MQ=255) | CGGGTGACCCGCAGTGAACTGGAGCAGCGGTTCTTGCCGATTTTGCTGGCAGCCAGCCGGGACCTTTGCCACCAGTTGTTTGGTTGAGACCGCAGGGAGCACTTTGCGGCCCCGGATCAGAACAG‑GCAAAACCGTTTCCTGTGCGATAAACGCACAGTGTCGTGCCGGGTGAATTGCGTCACCTCGGCCGGCTGATTAATGTCTCTCGCAACGGTCGGCTAGCCGACCGAACAAG‑AAAAACACTAGAGGCACTCACTCATGAATACTGTCACCTCGCTGCTGCGGCCGCACCCG > NC_002947/1567110‑1567403 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |