Predicted mutation | |||||||
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evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_002947 | 1,584,487 | A→T | 5.7% | L176Q (CTG→CAG) | PP_1388 ← | EmrB/QacA family drug resistance transporter |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_002947 | 1,584,487 | 0 | A | T | 5.7% | 210.8 / 2.5 | 70 | L176Q (CTG→CAG) | PP_1388 | EmrB/QacA family drug resistance transporter |
Reads supporting (aligned to +/- strand): ref base A (36/30); new base T (2/2); total (38/32) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.57e-01 |
CCTGGCCCACCAAGGTGATGCCCAGCAGCAGGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCGGGGGCACG > NC_002947/1584347‑1584633 | cctggcccACCAAGGTGATGCCCAGCAGCAGGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGc > 3:59271/1‑149 (MQ=255) aaGGTGATGCCCAGCAGCAGGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTTGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGAt < 3:349870/149‑1 (MQ=255) aaGGTGATGCCCAGCAGCAGGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCTGCCGCTGGGGCTGGTTgct < 7:109344/149‑3 (MQ=255) ggTGATGCCCAGCAGCAGGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATcc < 4:59271/149‑1 (MQ=255) aTGCCCAGCAGCAGGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGaa < 2:101329/149‑1 (MQ=255) ccAGCAGCAGGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGTTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGaa < 8:252963/145‑1 (MQ=255) ccAGCAGCAGGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGTTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGaa > 7:252963/1‑145 (MQ=255) ccAGCAGCAGGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACAcc > 8:123651/1‑149 (MQ=255) ccAGCAGCAGGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACAcc > 3:82906/1‑149 (MQ=255) cagcagGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAgc < 4:313357/149‑1 (MQ=255) agGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATc < 3:139283/132‑1 (MQ=255) agGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATc > 4:139283/1‑132 (MQ=255) ccAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAg < 4:82906/149‑1 (MQ=255) gCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACt > 6:21619/1‑149 (MQ=255) cGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCAATGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCg > 4:158453/1‑149 (MQ=255) gagaATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATc < 5:74379/118‑1 (MQ=255) gagaATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATc > 6:74379/1‑118 (MQ=255) gagaATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCgg < 7:215290/149‑1 (MQ=255) gagaATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGAGCCAGAACACCCAGCGCCACGACAGGTACTCgg > 6:291206/1‑149 (MQ=255) cAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCCCAAAGCAACCAGCCCCCGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAAcc > 3:266050/1‑149 (MQ=255) ggCGCCAAGTGAGTCCAGCTGTGCGTCACGTCGCTGCAGTGGGATGTCAGCGAGCGCTCGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCGAGTACACCCAGCGCCACGACAGGTACTCGGTCAACCAgcggccg < 4:266050/148‑2 (MQ=255) ccAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCAc > 6:320100/1‑149 (MQ=255) aaGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTg > 4:301015/1‑149 (MQ=255) gTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGAc > 6:234216/1‑112 (MQ=255) gTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGAc < 5:234216/112‑1 (MQ=255) tCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGc < 5:320100/149‑1 (MQ=255) aCCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCAc > 3:94775/1‑149 (MQ=255) tgCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCt < 8:182053/147‑1 (MQ=255) tgCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCt < 5:21619/147‑1 (MQ=255) gCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGc > 5:24837/1‑149 (MQ=255) ccTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGcc > 6:83009/1‑149 (MQ=255) cTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCcg > 7:243198/1‑149 (MQ=255) tCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACACGGACAACCAGCCGCCAATCACTCTCCCGGCCACGCAGGccac > 7:165745/1‑147 (MQ=255) gCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTAc < 4:35293/149‑1 (MQ=255) cACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACAtgc < 8:243709/149‑1 (MQ=255) cACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACAtg < 3:301015/148‑1 (MQ=255) aCTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCACAGCGGCAAGTTGATAAAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCACGGCCACGCTGGCCGAGGA‑‑‑GTTCAtgct > 1:99660/1‑149 (MQ=255) gCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATgctgct > 8:141658/1‑148 (MQ=255) gCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATgctgct > 7:211794/1‑148 (MQ=255) aTGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACACAGCGCCCCGAAAGGTAATCGGTCAACCAGCCGCCCCGAACTGGCCCGCCCCCGCTGCCCGCCGC‑‑‑GTAAAGgctcctc > 8:305946/1‑146 (MQ=255) tGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAg > 8:253423/1‑149 (MQ=255) tGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAAAACCCAGCGCCCCGACAGGTACTCGGTCAACCAGCCGCCCCGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTTCTGAAg > 7:167105/1‑149 (MQ=255) tCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCa > 8:276558/1‑106 (MQ=255) tCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCa < 7:276558/106‑1 (MQ=255) tCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAg > 4:178896/1‑147 (MQ=255) gcgagcgCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGcc > 6:100944/1‑149 (MQ=255) cgagcgCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGccc < 7:123651/149‑1 (MQ=255) cgcACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGt < 6:24837/149‑1 (MQ=255) cgcACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGt < 5:83009/149‑1 (MQ=255) gcACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGaa < 1:90045/137‑1 (MQ=255) gcACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGaa > 2:90045/1‑137 (MQ=255) gcACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGc > 5:88725/1‑142 (MQ=255) gcACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGc < 6:88725/142‑1 (MQ=255) gcAAGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTa < 7:305946/149‑1 (MQ=255) cccACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTcg > 5:209736/1‑149 (MQ=255) cacaAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTcgcg > 3:340532/1‑149 (MQ=255) acaAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTcgcgc > 2:166495/1‑149 (MQ=255) gatcAACCTGCCGCTGGGGCTGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGaa > 2:235680/4‑118 (MQ=255) gatcAACCTGCCGCTGGGGCTGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGaa < 1:235680/115‑1 (MQ=255) aGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCgggg < 7:141658/149‑1 (MQ=255) tcAACCTGCCGCTGGGGCTGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCggggg > 7:167861/2‑149 (MQ=255) cAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCGGGGGc < 3:178896/149‑1 (MQ=255) aaCCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCGGGGGCa > 6:319245/1‑149 (MQ=255) aCCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGCTAGGGACATGATGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCggggg > 1:119196/1‑149 (MQ=255) aCCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCGGGGGCAc < 7:253423/149‑1 (MQ=255) aCCAGCCCCAGCGGCAGGTTGAGCCAGAACACCCAGCGCCACGACAGGTACTCGGTCACCCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCGGGGGCAc < 5:291206/149‑1 (MQ=255) ccAGCCCCAGCTGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCGGGGGCACg < 8:167105/149‑1 (MQ=255) ccAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCGGGGGCACg < 5:319245/149‑1 (MQ=255) cAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCGGGGGCACg > 4:7866/1‑148 (MQ=255) cAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCGGGGGCACg > 2:121929/1‑148 (MQ=255) aGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCGGGGGCACg > 8:151532/1‑147 (MQ=255) | CCTGGCCCACCAAGGTGATGCCCAGCAGCAGGCTGCCAAGGCCGAGAATCAACAGCATGGCGCCAAGGTAGTCCACCTGTGCCTCACGACGCTGCACTGGCATGTCAGCGAGCGCACGGCGAATGGCCCACAAAGCAACCAGCCCCAGCGGCAGGTTGATCCAGAACACCCAGCGCCACGACAGGTACTCGGTCAACCAGCCGCCCAGCACTGGCCCGGCCACGCTGGCCGCGGC‑‑‑GTACATGCTGCTGAAGTAGCCCTGGTAGCGGCCGCGTTCGCGCGGGGGCACG > NC_002947/1584347‑1584633 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |