Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,598,497 T→C 8.5% N89D (AAC→GAC) ‡ dctB ← C4‑dicarboxylate transport sensor protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,598,4970TC 8.5% 162.8 / 5.0 59N89D (AAC→GAC) ‡dctBC4‑dicarboxylate transport sensor protein
Reads supporting (aligned to +/- strand):  ref base T (27/27);  new base C (3/2);  total (30/29)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.27e-01

TAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGCTGGCTGGCACGCTTGGCGT  >  NC_002947/1598349‑1598643
                                                                                                                                                      |                                                                                                                                                   
tAGGGGCGGAACCCGTTGTTGGAGGCGAGGTAGCTGCTGGGCAGCCGCCAGTTGCTGGGGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGtt                                                                                                                                                     <  4:340971/149‑1 (MQ=255)
  ggggCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTc                                                                                                                                                    <  6:143160/148‑1 (MQ=255)
  ggggCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTc                                                                                                                                                    <  2:46599/148‑1 (MQ=255)
  ggggCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCt                                                                                                                                                   >  6:15125/1‑149 (MQ=255)
  ggggCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCt                                                                                                                                                   <  1:51438/149‑1 (MQ=255)
    ggCCGAAACCGTATTTGGCCCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCATCCCGGTGCGGTCGAGCATCTCGATGGTGGAGGAATTGGCGGCGCCATTTATGCGGTCAGAGCTTGAGGTTCAGGGCGTTCTg                                                                                                                                                  <  7:52076/149‑1 (MQ=255)
       ggAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAAcc                                                                                                                                              <  5:238981/149‑1 (MQ=255)
             cGTAGTTGGAGCCGACGTACCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCACGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTtcg                                                                                                                                        >  6:63129/1‑149 (MQ=255)
                      aGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCggg                                                                                                                               <  4:292227/149‑1 (MQ=255)
                      aGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGAACGCCCTGAACCtcaa                                                                                                                                          >  8:338191/1‑135 (MQ=255)
                      aGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGAACGCCCTGAACCtcaa                                                                                                                                          <  7:338191/138‑4 (MQ=255)
                         cGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCcg                                                                                                                            >  7:7394/1‑149 (MQ=255)
                          gACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCcgc                                                                                                                           >  5:143438/1‑149 (MQ=255)
                              tAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCaa                                                                                                                       <  5:106045/149‑1 (MQ=255)
                                gctgctGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGCGCTTGAGGTTCAGGGCGTTCTGACGCTTTTCGTCGACCGGGCCGCGCAAgg                                                                                                                     >  8:59793/1‑149 (MQ=255)
                                  tgctgGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCaa                                                                                                                       <  3:31665/145‑1 (MQ=255)
                                  tgctgGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCaa                                                                                                                       >  4:31665/1‑145 (MQ=255)
                                  tgctgGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCt                                                                                                                   >  5:6573/1‑149 (MQ=255)
                                     gccattgccgccAGCAACTGGCGGCTATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTAAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGc                                                                                                                 >  8:147311/7‑148 (MQ=255)
                                        gCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATc                                                                                                             <  4:36339/149‑1 (MQ=255)
                                         cAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCa                                                                                                            <  6:6573/149‑1 (MQ=255)
                                          aGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAg                                                                                                           <  5:358035/149‑1 (MQ=255)
                                              gccAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGAACGCCCTGAACCtcaa                                                                                                                                          >  4:80815/1‑111 (MQ=255)
                                              gccAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGAACGCCCTGAACCtcaa                                                                                                                                          <  3:80815/114‑4 (MQ=255)
                                                  gTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGt                                                                                                   <  4:283314/149‑1 (MQ=255)
                                                         gcggcAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAgcgc                                                                                           <  8:7394/149‑1 (MQ=255)
                                                              aaTGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTc                                                                                                        <  4:351594/132‑1 (MQ=255)
                                                              aaTGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTc                                                                                                        >  3:351594/1‑132 (MQ=255)
                                                               aTGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCcg                                                                                                                            >  6:368298/1‑111 (MQ=255)
                                                                   ccAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCAcggcg                                                                                 >  6:333844/1‑149 (MQ=255)
                                                                    cAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCAcggcgg                                                                                >  2:309522/1‑149 (MQ=255)
                                                                      gCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCgggg                                                                              >  6:267710/1‑149 (MQ=255)
                                                                       cccGATGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCggg                                                                               >  6:317463/1‑147 (MQ=255)
                                                                        ccGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGGCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAg                                                                            <  5:15125/149‑1 (MQ=255)
                                                                                    agcagcTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTGTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCAGGGTCCAGCGCCAGCACCGCGGGGAGGGCACCGTAGc                                                                 >  1:69752/1‑149 (MQ=255)
                                                                                     gcagcTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGcga                                                               >  7:39872/1‑149 (MQ=255)
                                                                                      cagcTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGcgat                                                              <  5:112681/149‑1 (MQ=255)
                                                                                       agcTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGcgatc                                                             >  1:276024/1‑149 (MQ=255)
                                                                                       agcTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGcgatc                                                             <  5:317463/149‑1 (MQ=255)
                                                                                            gAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGcgatcgat                                                          >  5:156960/1‑147 (MQ=255)
                                                                                                      gaATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAg                                              >  5:304243/1‑149 (MQ=255)
                                                                                                        aTTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAg                                                                            >  6:286935/1‑117 (MQ=255)
                                                                                                        aTTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAg                                                                            <  5:286935/117‑1 (MQ=255)
                                                                                                             cggcgCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGATGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTg                                       <  7:147311/149‑1 (MQ=255)
                                                                                                                 gcCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGt                                   <  6:304243/149‑1 (MQ=255)
                                                                                                                  ccATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGtt                                        <  7:32914/143‑1 (MQ=255)
                                                                                                                  ccATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGtt                                        >  8:32914/1‑143 (MQ=255)
                                                                                                                    aTTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGTACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACa                                <  7:299465/149‑1 (MQ=255)
                                                                                                                            gTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGt                        <  2:276024/149‑1 (MQ=255)
                                                                                                                                  gAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGAGCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGGTgct                    >  8:304177/1‑149 (MQ=255)
                                                                                                                                   aGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTgctg                   <  6:143438/149‑1 (MQ=255)
                                                                                                                                       tGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGGACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTgctggctg               >  6:42799/1‑149 (MQ=255)
                                                                                                                                        gAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTgctggctg               <  5:333844/148‑1 (MQ=255)
                                                                                                                                        aaGGTTCAGAACGCCCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGctggctgg              >  8:172864/2‑149 (MQ=255)
                                                                                                                                          ggTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGCTGGCTGGCa            >  6:92850/1‑149 (MQ=255)
                                                                                                                                           gTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGCTGGCTGGCAc           >  7:70057/1‑149 (MQ=255)
                                                                                                                                                 ggCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGgtg                                                   <  1:249285/104‑1 (MQ=255)
                                                                                                                                                 ggCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGgtg                                                   >  2:249285/1‑103 (MQ=255)
                                                                                                                                                  gCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGGCCAGCGCCAGGACGGCGGGGAGGGCACTGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGCTGGCTGGCACGCTTGGc    <  5:63129/149‑1 (MQ=255)
                                                                                                                                                    gTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGCTGGCTGGCACGCTTGGcgt  >  3:36931/1‑149 (MQ=255)
                                                                                                                                                      |                                                                                                                                                   
TAGGGGCGGAAACCGTAGTTGGAGCCGACGTAGCTGCTGGGCAGCCGCCAGTTGCTGGCGGCAATGGCCAGCCCGGTGCGGTCGAGCAGCTCGAGGGTGGAGGAATTGGCGGCGCCATTGATGCGTTCGAGCTTGAGGTTCAGGGCGTTCTGAACCTTTTCGTCGACCGGGCCGCGCAAGGCTGCGATCAGCTCCGGGTCCAGCGCCAGCACGGCGGGGAGGGCACGGTAGCGATCGATCAGGGTGTGCAGTGCGTTGGCGTACAGGCCCAGTTGCTGGCTGGCACGCTTGGCGT  >  NC_002947/1598349‑1598643

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: