| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,892,228 | T→G | 6.3% | L157R (CTG→CGG) | PP_1697 → | transcriptional regulator, GntR family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,892,228 | 0 | T | G | 6.3% | 245.3 / 6.5 | 79 | L157R (CTG→CGG) | PP_1697 | transcriptional regulator, GntR family |
| Reads supporting (aligned to +/- strand): ref base T (33/40); new base G (2/3); total (36/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.39e-01 | |||||||||||
GAGTCGCTGCCGGCGCCTTCCGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCGGTGCATGGCCGCTTGCTGCAACTGCCG > NC_002947/1892080‑1892370 | gAGTCGCTGCCGGCGCCTTCCGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCgct < 8:160477/149‑1 (MQ=255) gTCGCTGCCGGCGCCTTCCGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCgctgc > 8:29942/1‑149 (MQ=255) cGCTGCCGGCGCCTTCCGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGctgctg > 5:152945/1‑149 (MQ=255) ccGGCGCCTTCCGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCAGCGGCTGGaag < 2:5322/148‑3 (MQ=255) ggCGCCTTCCGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTgg < 8:137272/149‑1 (MQ=255) ggCGCCTTCCGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTgg < 6:152945/149‑1 (MQ=255) cgcCTTCCGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGAt < 4:94652/149‑1 (MQ=255) ttCCGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCAGCGGCTGGaag > 3:316553/1‑138 (MQ=255) ttCCGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCAGCGGCTGGaag < 4:316553/140‑3 (MQ=255) ttCCGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGAGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCtc > 1:75802/1‑147 (MQ=255) ccGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGaa < 7:16624/148‑1 (MQ=255) ccGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGa < 3:334967/147‑1 (MQ=255) cgcgGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAAc < 4:351620/148‑1 (MQ=255) gcgGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAg > 2:257410/1‑149 (MQ=255) cGAGGCTTTGGGCCGGGCAGGGGAGGCAGAAGTGATCCGCATGATTCGCACACGTCTGCTCGGCGCGCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTAAACAGCGAGGG‑cc < 2:75802/149‑1 (MQ=255) cGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGAc < 1:326446/127‑1 (MQ=255) cGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGAc < 1:321523/127‑1 (MQ=255) cGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGAc > 2:321523/1‑127 (MQ=255) cGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGAc > 2:326446/1‑127 (MQ=255) aGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCg > 4:166082/1‑149 (MQ=255) ttGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCgctgct < 7:64373/149‑1 (MQ=255) gggCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGa < 2:120146/135‑1 (MQ=255) gggCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCACCCGCTGCTGGACGTGGATCTGAACAGCGa > 1:120146/1‑135 (MQ=255) ggCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTa > 6:231645/1‑149 (MQ=255) cTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTAccc > 2:25802/1‑149 (MQ=255) tGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTAccc > 6:178703/1‑148 (MQ=255) ggCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCCCAGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGa > 7:156332/1‑149 (MQ=255) cAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATc < 7:164856/149‑1 (MQ=255) aGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACa < 5:39014/122‑1 (MQ=255) aGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACa > 6:39014/1‑122 (MQ=255) aGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATc > 6:121371/1‑148 (MQ=255) aGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCt < 7:29942/149‑1 (MQ=255) gggAGGCAGAATTGATCCGCATCATTCGGACACGTCTGCTCGGCTCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGACAAACCTTCCAGCCTCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTAc < 8:156332/149‑1 (MQ=255) ggAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACa < 1:153537/119‑1 (MQ=255) ggAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACa > 2:153537/1‑119 (MQ=255) aGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGaa < 1:289229/149‑1 (MQ=255) gCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAgc > 3:250712/1‑149 (MQ=255) aGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAgcgc > 8:261050/1‑149 (MQ=255) gAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAg > 1:42831/1‑145 (MQ=255) gAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAg < 2:42831/145‑1 (MQ=255) gAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCt < 5:178703/149‑1 (MQ=255) aaGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCtg > 3:86752/1‑149 (MQ=255) gTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCtgtg < 1:257410/149‑1 (MQ=255) gTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCtgtg < 4:86752/149‑1 (MQ=255) cGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGt > 5:200885/1‑147 (MQ=255) atTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCg > 3:99898/1‑120 (MQ=255) atTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCg < 4:99898/120‑1 (MQ=255) atTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAggtggt > 4:149591/1‑149 (MQ=255) ttCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTc > 8:221268/1‑149 (MQ=255) gCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCCAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCGGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGcc > 1:143915/1‑149 (MQ=255) cacaCGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCt > 8:155084/1‑149 (MQ=255) acacGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAggt < 2:44000/140‑1 (MQ=255) acacGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAggt > 1:44000/1‑140 (MQ=255) acGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAggtg > 5:73965/1‑139 (MQ=255) acGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAggtg < 6:73965/139‑1 (MQ=255) cTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCgaag > 5:325383/1‑148 (MQ=255) tCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCgaaga > 2:300050/1‑148 (MQ=255) tCGGCGCCCAGCCGGTGCT‑GCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGaaa > 4:273511/1‑149 (MQ=255) ggCGCCCAGCCGGGGCTGGCCGAAGAAATCTGGCGGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGaaa < 1:230668/148‑1 (MQ=255) gcgcCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAAcc < 5:109410/149‑1 (MQ=255) ccAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGa < 6:200885/149‑1 (MQ=255) cAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCgctg < 8:119240/87‑1 (MQ=255) cAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCg > 4:309363/1‑115 (MQ=255) cAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCg < 3:309363/115‑1 (MQ=255) ccGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGAccgc < 1:25802/149‑1 (MQ=255) gCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAgg > 4:214977/1‑109 (MQ=255) gCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAgg < 3:214977/109‑1 (MQ=255) gCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGt < 6:325383/149‑1 (MQ=255) aagaaATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGAc < 3:166082/149‑1 (MQ=255) aaaTCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGAcgcg < 4:250712/149‑1 (MQ=255) aTCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCGGt < 1:300050/149‑1 (MQ=255) gCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGt > 2:128123/1‑135 (MQ=255) cTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCGGTGCATgg < 5:121371/149‑1 (MQ=255) gCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCGGTGCATGGcc < 3:273511/149‑1 (MQ=255) gcgcCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTAAGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCTGTGCATGGCAGCt > 4:167086/1‑149 (MQ=255) cAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCGGTGCATGGCCGCTtgct < 7:261050/149‑1 (MQ=255) cAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCGGTGCATGGCCGCTtgct > 2:196332/1‑149 (MQ=255) tccacgtCCAGCAGCGGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCGGTGCAt > 7:335412/7‑137 (MQ=255) tccacgtCCAGCAGCGGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCGGTGCAt < 8:335412/131‑1 (MQ=255) aGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCGGTGCATGGCCGCTTGCTGCAACTgccg < 4:171926/149‑1 (MQ=255) aGCCGCTGCTGGACGTGGATCTAAACAGCGAGGGTCCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCGGTGCATgg > 1:229019/1‑131 (MQ=255) aGCCGCTGCTGGACGTGGATCTAAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCGGTGCATgg < 2:229019/130‑1 (MQ=255) | GAGTCGCTGCCGGCGCCTTCCGCGGTGGCCGAGGCATTGGGCCTGGCAGGGGAGGCAGAAGTGATCCGCATCATTCGCACACGTCTGCTCGGCGCCCAGCCGGTGCTGGCCGAAGAAATCTGGCTGCCGCGCCAAACCTTCCAGCCGCTGCTGGACGTGGATCTGAACAGCGAGGG‑CCCGCTGCTGTACCCGATCTACGAAGCGCTGTGCGGTCAGGTGGTCGCCTACGCCGAAGAAACCCTGACCGCCGAAGCGGTCGACGCGGTGCATGGCCGCTTGCTGCAACTGCCG > NC_002947/1892080‑1892370 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |