| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,252,814 | T→A | 8.2% | intergenic (+70/‑49) | leuD → / → PP_1987 | 3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,252,814 | 0 | T | A | 8.2% | 202.1 / 4.4 | 70 | intergenic (+70/‑49) | leuD/PP_1987 | 3‑isopropylmalate dehydratase small subunit/UbiE/COQ5 family methlytransferase |
| Reads supporting (aligned to +/- strand): ref base T (31/33); new base A (3/3); total (34/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TGCAGGACAGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTGAAT > NC_002947/2252668‑2252959 | tGCAGGACAGCGACGCGATCAAGGCCTACGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGAAGCTGACACTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑c > 4:6238/1‑149 (MQ=255) gCAGGACAGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑cc > 4:194017/1‑149 (MQ=255) aGGACAGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGCGTATA‑CCcg > 4:251928/1‑149 (MQ=255) cAGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGaa < 1:284400/149‑1 (MQ=255) cAGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTAAA‑CCcg‑cgc < 8:99734/148‑2 (MQ=255) gCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGaa > 6:145089/1‑147 (MQ=255) cGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAagag < 2:261730/149‑1 (MQ=255) gACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAgg < 8:177296/149‑1 (MQ=255) gcgATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCg > 3:101786/1‑149 (MQ=255) gATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCgg > 2:290073/1‑148 (MQ=255) gATCAAGGCCTGCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGACGCCTCGCTCCTACAGAAAGGTACGCGGTCGCGGTAGGCGCGGTTTTA‑CCCG‑CGAAGAGGCCGGc > 2:63702/1‑149 (MQ=255) ttCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGcaac > 3:125069/1‑148 (MQ=255) gAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACaaa > 8:112565/1‑148 (MQ=255) aaGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACaaaaa > 2:25097/1‑149 (MQ=255) gCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTAAA‑CCcgagccta > 1:281288/1‑120 (MQ=255) gCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTAAA‑CCcgagccta < 2:281288/126‑7 (MQ=255) aaGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTaa < 4:128785/149‑1 (MQ=255) aGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTaaa < 4:191206/149‑1 (MQ=255) aGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTaaa < 4:101786/149‑1 (MQ=255) cACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACaaaaa > 1:218075/1‑141 (MQ=255) cACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACaaaaa < 2:218075/141‑1 (MQ=255) cgcgCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAAc > 3:190091/1‑149 (MQ=255) cagccTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCAG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGa > 7:234886/1‑149 (MQ=255) agccTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAc < 1:52676/149‑1 (MQ=255) cTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGaa > 6:356542/1‑135 (MQ=255) cTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGaa < 5:356542/135‑1 (MQ=255) ggCTGGTCCGTGATGCCTGAAGTTCGTCGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAccagca < 8:105542/148‑1 (MQ=255) gCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGAccagcacc < 1:25097/149‑1 (MQ=255) ccTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTACCCCGATGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGAt < 1:290073/149‑1 (MQ=255) cTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGAtgtg < 7:32242/149‑1 (MQ=255) gAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGt > 7:324478/1‑149 (MQ=255) gTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTgg < 2:347060/137‑1 (MQ=255) gTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTgg > 1:347060/1‑137 (MQ=255) aCAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCg > 7:239395/1‑149 (MQ=255) aCAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCg > 5:170754/1‑149 (MQ=255) aGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCTGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGc < 3:251928/149‑1 (MQ=255) aGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGc < 8:324478/149‑1 (MQ=255) cGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAg > 7:22952/1‑148 (MQ=255) ggCCTCCTCGCTCCTACAGAAAGGTACCCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAg < 3:6238/149‑1 (MQ=255) ggCATCCTCGATCCTACAGAAATTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAg < 8:239395/149‑1 (MQ=255) cctcctCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGc < 5:145089/149‑1 (MQ=255) ctcctcGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAAc > 5:264673/1‑129 (MQ=255) ctcctcGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAAc < 6:264673/129‑1 (MQ=255) ctcGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAgc > 8:283969/1‑149 (MQ=255) ctcGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAgc < 7:283969/149‑1 (MQ=255) cTACAGACAGTTCCGCGGGCGCTGTAGGCGCGGGTTTA‑CCCG‑CTAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCTGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTAcc < 8:234886/149‑1 (MQ=39) cTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTAc < 4:125069/148‑1 (MQ=255) tACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCt > 5:43063/1‑149 (MQ=255) aGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGt > 8:248520/1‑110 (MQ=255) aGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGt < 7:248520/110‑1 (MQ=255) gAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCt > 3:326096/1‑145 (MQ=255) gAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCt < 4:326096/145‑1 (MQ=255) gAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTcagc < 7:112565/149‑1 (MQ=255) gAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTcag > 4:275517/1‑148 (MQ=255) aaaGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTcag > 1:163954/1‑147 (MQ=255) ttACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAgcgc > 3:285245/1‑149 (MQ=255) gcgGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTg < 4:190091/149‑1 (MQ=255) gTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGc > 6:99091/1‑113 (MQ=255) gTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGc < 5:99091/113‑1 (MQ=255) cTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGcc > 3:333064/1‑148 (MQ=255) tcttcgcgGGTAAA‑CCCG‑CGCAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGCCCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAg > 6:224041/5‑149 (MQ=255) ttcgcgGGTAAA‑CCCG‑CGAAGAGGCCGGCAGAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAgg > 1:33091/3‑148 (MQ=255) gcgcGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGc < 2:85345/94‑1 (MQ=255) gcgcGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGc > 1:85345/1‑94 (MQ=255) gcgcGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCa < 6:43063/149‑1 (MQ=255) gcgcGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCa < 4:333064/149‑1 (MQ=255) gcgGGTAAA‑CCCG‑CGCAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGt < 5:224041/149‑1 (MQ=255) cgGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTg < 4:285245/149‑1 (MQ=255) gggTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTg > 5:53386/1‑148 (MQ=255) gTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCAAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTGAAt < 1:63702/149‑1 (MQ=255) ttA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGAtgt < 5:187893/76‑1 (MQ=255) ttA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGAtgt > 6:187893/1‑76 (MQ=255) | TGCAGGACAGCGACGCGATCAAGGCCTTCGAAGCCAAGCACCGCGCCAGCCAGCCTTGGCTGTTCCGTGATGCCTGAAGTTCGTAGGTGACAGTGCGGGCCTCCTCGCTCCTACAGAAAGTTACGCGGTCGCTGTAGGCGCGGGTTTA‑CCCG‑CGAAGAGGCCGGCACAGGCAACAAAAATCTAAAGGAACGAGACATGACCAGCACCCAGCACATCGATGTGGTCCAACGCCAGTTCGGCGAGCAGGCCAGCGCCTACCTCAGCAGCGCCGTGCACGCCCAAGGCAGTGAAT > NC_002947/2252668‑2252959 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |