| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,344,682 | G→T | 5.8% | intergenic (‑33/+42) | PP_2061 ← / ← PP_2062 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,344,682 | 0 | G | T | 5.8% | 378.2 / 6.3 | 123 | intergenic (‑33/+42) | PP_2061/PP_2062 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (63/52); new base T (4/4); total (67/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 126 total aligned reads displayed.
CCGGACCAGTCGTCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAG > NC_002947/2344534‑2344828 | cGGACCAGTCGTCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAgg > 6:175065/1‑149 (MQ=255) ggACCAGGAGTCGACAATAAATACCCCGTTCTCATAGTCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCCGCGCCGCTGGCGGGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAggg < 4:219733/149‑1 (MQ=255) aCCAGTCGTCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTc < 1:182102/149‑1 (MQ=255) ccAGTCGTCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCg < 1:256613/149‑1 (MQ=255) cAGTCGTCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGt > 6:330860/1‑149 (MQ=255) gtcgACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttcgt < 3:106553/149‑1 (MQ=255) tcgACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑Ttcggc > 8:337156/1‑147 (MQ=255) gACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCCTGGTc < 7:105455/139‑1 (MQ=255) aCAATAAATACCCCTTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGACGAA‑ACGACCCTGGTCGTCTTCGGCGcc < 8:250143/149‑1 (MQ=255) aCAATAAATACCCCGTTCTCATAGGCTATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGc < 2:79513/148‑1 (MQ=255) cAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCt > 3:170273/1‑149 (MQ=255) cAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCAACATTTCAGCGCCGATGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCt > 6:149931/1‑149 (MQ=255) aataaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCt > 7:28072/1‑148 (MQ=255) aataaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGCTCGA‑TGCGTCGCCt > 4:352412/1‑148 (MQ=255) taaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCa > 2:159509/1‑149 (MQ=255) taaataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCa > 3:195560/1‑149 (MQ=255) ataCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCAttt < 5:330860/149‑1 (MQ=255) taCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTa > 5:142166/1‑149 (MQ=255) taCCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTa < 1:59432/149‑1 (MQ=255) taCCCCGTTCTCATAGGCGATATAACCCGAAGCGCTACCGTTATTGATGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTa > 1:245365/1‑149 (MQ=255) aCCCCTTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTAt < 4:46097/149‑1 (MQ=255) ccccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTTGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTAt < 5:22373/148‑1 (MQ=255) cccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGGAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTAt > 1:89813/1‑147 (MQ=255) ccGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAg > 4:112935/1‑149 (MQ=255) cGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAgt < 4:170273/149‑1 (MQ=255) ttCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAgtgt < 6:325124/149‑1 (MQ=255) aTAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAtt > 3:84756/1‑149 (MQ=255) aTAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAtt > 8:78466/1‑149 (MQ=255) tAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGAGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTAttt < 2:245365/149‑1 (MQ=255) aGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCAACATTTCATCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCCTCATTTATGAGTGTGTATTTg > 5:296185/1‑149 (MQ=255) cGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTa > 4:18945/1‑148 (MQ=255) atatAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTaaa > 6:148865/1‑148 (MQ=255) atatAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAAt < 4:83808/149‑1 (MQ=255) cTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGAt > 1:335284/1‑149 (MQ=255) cTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGAt < 7:78466/149‑1 (MQ=255) tctcGTTATTTCTGGAATTGAAATTCCAGATTTCAGCGCGGCTTGCGTTAGTATTCAATAGGGCGTAAGTATAGGCGACGAAGAAGACCAGGGTAGT‑TTCGTCGCCTTCATTTATGAGTGTTTATTTGTAAATCAGTGATGGGCtta < 4:233613/144‑3 (MQ=255) tAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGAtt > 2:73765/1‑149 (MQ=255) cGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGAttttt < 4:195560/149‑1 (MQ=255) gTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGAtttttt > 5:337858/1‑149 (MQ=255) gTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGAGTCAGTAGAGGCGCCGAAGACGAACAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGa > 3:233613/1‑143 (MQ=255) cTGGCATTGAAATTCAACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGGTGATTTTTTTGCGCTa > 6:362740/1‑149 (MQ=255) tGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTAt > 6:119999/1‑149 (MQ=255) ggCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGATGATTTTTTTGCGCTAtt > 3:20134/1‑149 (MQ=255) ggCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TACGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTAtt > 3:24889/1‑149 (MQ=255) gCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTAttg > 5:305162/1‑149 (MQ=255) aTTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTAttgtt < 1:73765/149‑1 (MQ=255) tGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGAAGGGCTGATTTTTTTg > 3:211070/1‑137 (MQ=255) aTTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCAGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGtt < 4:266553/149‑1 (MQ=255) ttCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGTGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCCTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTg < 6:296185/149‑1 (MQ=255) ttCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCg > 6:3034/1‑73 (MQ=255) ttCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCg < 5:3034/73‑1 (MQ=255) ccACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGa > 7:241312/1‑148 (MQ=255) cacaTTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGat > 8:133660/1‑148 (MQ=255) acaTTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGataa > 7:272093/1‑149 (MQ=255) caTTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAgtg < 2:239526/92‑1 (MQ=255) aTTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATTAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGataata < 5:175065/149‑1 (MQ=255) ttCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATAtt > 6:291647/1‑149 (MQ=255) ccgcTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCt < 5:291647/149‑1 (MQ=255) ccgcTGGCGTGAGTATTCAAGAGGGAGTCAGTACAGGCGACGAAGACGACCAGGGTCGT‑TTCGTATCCTTCATTTATGAGTATGTATTTGTAAATCAGTAATATACTAATTTTTTTGCGCTATTTTTGTCGTTGATAATATTGATATc > 4:245061/1‑148 (MQ=255) cTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTTATGTCTAc > 8:234564/1‑148 (MQ=255) cTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTAc > 1:333067/1‑148 (MQ=255) cTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTAc > 7:332509/1‑148 (MQ=255) tGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGa > 6:158658/1‑149 (MQ=255) tGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGa < 5:119999/149‑1 (MQ=255) gCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGAt < 5:158658/148‑1 (MQ=255) gCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATg > 7:185733/1‑149 (MQ=255) gTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGcc > 6:243060/1‑149 (MQ=255) gTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGcc < 1:159509/149‑1 (MQ=255) gAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCTGGTTAGT‑TTCTTCTCATTCATTTATTAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGccc < 5:149931/148‑1 (MQ=255) gAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCATGGTCGT‑TTCGTCACCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCt > 1:234571/1‑149 (MQ=255) attATTCAAGAGGTCTTCAGTAGAGGCTCCGAAGACGACCATGGTCGT‑TTCGTCGACTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCt < 3:245061/146‑1 (MQ=255) tATTCAAGACGGCCGCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGc < 6:282506/149‑1 (MQ=255) aTTCAAGAGGTCTTCAGTTGCGTAGAGGAAGACGACCAGGTTCGT‑TTCTTTGCCTTCATTTTTGAGTGTTTATTTGTAAATCTGTTATTGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTTATGTCTACGATGCCCTTGc < 4:24889/148‑1 (MQ=255) ttCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCtt < 8:272093/149‑1 (MQ=255) ttCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCt < 8:185733/148‑1 (MQ=255) tCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTGGATAATATTGAGTTCTACGATGCCATTGCttt > 8:162824/1‑148 (MQ=255) aaGAGGGCGTCAGTTGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtat > 5:327228/1‑148 (MQ=255) aaGAGGGCGTCAGTAGAGTCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGa < 6:256171/135‑1 (MQ=255) aaGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTTATAATATTGATGTCTACGATGCCCTTGCTtat > 4:206987/1‑148 (MQ=255) aaGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGa > 5:256171/1‑135 (MQ=255) aaGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtat < 5:243060/148‑1 (MQ=255) aaGAGGGCGTCAGTAGAGGCGCCGAAGACGAACAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTtat < 3:18945/148‑1 (MQ=255) agagGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCt < 3:257465/130‑1 (MQ=255) gTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCtttt > 3:76841/1‑149 (MQ=255) taattAGAGGCGCCGATTACGAACAGGGACGT‑TTCGTAGACTTCATTTATGAGGGTGTATTTGTAAATCAGTGATGTGCTGATTATTTTGCGCTATTGTTGTAGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTg < 3:21274/145‑1 (MQ=255) aGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGAt > 7:87346/1‑125 (MQ=255) gagGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATc < 5:26988/148‑1 (MQ=255) agGCGACGAA‑ACGACCCTGGTCGTCTTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCt > 4:41404/1‑149 (MQ=38) gcgcCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGt < 7:61316/55‑1 (MQ=255) gcgcCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGt > 8:61316/1‑55 (MQ=255) gcCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTg < 1:177295/62‑1 (MQ=255) gcCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCTCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTAGCTTATAAAGCTTTTGGCATCCTTGAg > 8:135146/1‑149 (MQ=255) gcCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCtt > 6:262956/1‑146 (MQ=255) gcCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGa < 5:262956/148‑1 (MQ=255) gcCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAg > 3:216166/1‑149 (MQ=255) gacgaaacgacCCTGGTCGTCTTCGGCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAg > 2:180136/7‑149 (MQ=255) cgacCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGttt > 2:257720/1‑149 (MQ=255) gacCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGttt > 3:319521/1‑148 (MQ=255) acCATGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTa < 2:350764/149‑1 (MQ=255) cAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAg < 8:241312/149‑1 (MQ=255) | CCGGACCAGTCGTCGACAATAAATACCCCGTTCTCATAGGCGATATAACCCGCAGCGCTAACGTTATTGCTGGCATTGAAATTCCACATTTCAGCGCCGCTGGCGTGAGTATTCAAGAGGGCGTCAGTAGAGGCGCCGAAGACGACCAGGGTCGT‑TTCGTCGCCTTCATTTATGAGTGTGTATTTGTAAATCAGTGATGGGCTGATTTTTTTGCGCTATTGTTGTCGTTGATAATATTGATGTCTACGATGCCCTTGCTTATAAAGCTTTTGGCATCCTTGAGTTCGGTTTTAAG > NC_002947/2344534‑2344828 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |