Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,345,324	T→G	6.2%	G8G (GGA→GGC) ‡	PP_2062 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,345,324	0	T	G	6.2%	251.3 / 5.0	80	G8G (GGA→GGC) ‡	PP_2062	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (42/33);  new base G (2/3);  total (44/36)
Fisher's exact test for biased strand distribution p-value = 6.53e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01

TGTAGTTTGCTGGCTGGCCTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTGCCAGGGATCAAGGCGGA  >  NC_002947/2345176‑2345471                                                                                                                                                      |                                                                                                                                                    tgtAGTTTGCTGGCTGGCCTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACt                                                                                                                                                     <  6:71656/149‑1 (MQ=255)  gtAGTTTGCTGGCTGGCCTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACt                                                                                                                                                     <  6:66542/148‑1 (MQ=255)  gtAGTTTGCTGGCTGGCCTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTc                                                                                                                                                    >  5:277358/1‑149 (MQ=255)   tAGTTTGCTGGCTGGCCTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTcc                                                                                                                                                   >  4:281835/1‑149 (MQ=255)         gctggctgGCCTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGt                                                                                                                                                 >  4:89314/1‑145 (MQ=255)            ggctggcCTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCt                                                                                                                                          <  3:89314/149‑1 (MQ=255)              ctggcCTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTgg                                                                                                                                        <  1:194324/149‑1 (MQ=255)              ctggcCTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTgg                                                                                                                                        <  1:195945/149‑1 (MQ=255)                 gcCTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACGGAGTCAGAtatatgt                                                                                                                                      <  5:114001/148‑7 (MQ=255)                  ccTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACTGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACt                                                                                                                                    >  4:166/1‑149 (MQ=255)                   cTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACtt                                                                                                                                   <  3:281835/149‑1 (MQ=255)                   cTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACGGAGTCAGAtatatg                                                                                                                                       >  3:315683/1‑140 (MQ=255)                   cTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACGGAGTCAGAtatatg                                                                                                                                       <  4:315683/145‑6 (MQ=255)                      ttgttgGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACTGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTg                                                                                                                                  <  3:166/147‑1 (MQ=255)                         ttgGGGCCGTGGATGTTCGTGCGGCGACATGTTGGTCACGGGCCTGGCGTTCCAAACGGGGTGCAATGGTCGGAGCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCAt                                                                                                                              <  2:273991/148‑1 (MQ=255)                            gggCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAg                                                                                                                           <  7:289969/148‑1 (MQ=255)                            gggCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAg                                                                                                                           >  8:289969/1‑148 (MQ=255)                            gggCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGt                                                                                                                          >  1:284895/1‑149 (MQ=255)                             ggCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTg                                                                                                                         <  7:90208/149‑1 (MQ=255)                               ccGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGAt                                                                                                                       >  4:100597/1‑149 (MQ=255)                                       gTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCAt                                                                                                                >  3:275527/1‑148 (MQ=255)                                                gcgcCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCg                                                                                                      <  3:100597/149‑1 (MQ=255)                                                 cgcCATGTTGGTCACGGACCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGt                                                                                                     <  2:145931/149‑1 (MQ=255)                                                   ccATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTAGTGc                                                                                                   >  3:248331/1‑149 (MQ=255)                                                        gtGGGCACGGGCCTGGCCTTCCAAACGGGCAGCACTCGGCGCATCGTGTATTTTACGGGGTGTCGA‑AGGTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGttt                                                                                              <  8:258375/148‑1 (MQ=255)                                                          ggTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTc                                                                                             >  7:213456/1‑148 (MQ=255)                                                            tCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGAc                                                                                          >  2:103754/1‑149 (MQ=255)                                                              aCGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACg                                                                                         <  1:103754/148‑1 (MQ=255)                                                                gggCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTg                                                                                                 <  7:336514/138‑1 (MQ=255)                                                                gggCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTg                                                                                                 >  8:336514/1‑138 (MQ=255)                                                                  gCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCttt                                                                                    >  8:124706/1‑149 (MQ=255)                                                                  gCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCttt                                                                                    >  8:37060/1‑149 (MQ=255)                                                                   ccTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGAGAGTTTTATGCTTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCAATTAGCCATTCGTGCTGTTTCGACGTCttt                                                                                    >  1:98051/1‑149 (MQ=255)                                                                    cTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTc                                                                                  >  2:92232/1‑149 (MQ=255)                                                                     tGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCg                                                                                 >  8:120703/1‑149 (MQ=255)                                                                     tGGCTATACAAAATGGGTGCAATGGTCGGATCGTGTTTTTTACGGGTTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCAACAGTGATTACCCATTAGAAATACGTGCTGTTTCGAAGTCATTTc                                                                                  >  8:120705/1‑148 (MQ=255)                                                                      ggCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGc                                                                                >  5:89978/1‑149 (MQ=255)                                                                         tttCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGc                                                                             <  6:277358/149‑1 (MQ=255)                                                                         tttCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGc                                                                             >  4:219655/1‑149 (MQ=255)                                                                              aaaCGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTg                                                                                                    >  4:245415/1‑121 (MQ=255)                                                                              aaaCGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTg                                                                                                    <  3:245415/121‑1 (MQ=255)                                                                              aaaCGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAgg                                                                         >  1:303563/1‑148 (MQ=255)                                                                              aaaCGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGc                                                                        >  2:208832/1‑149 (MQ=255)                                                                                        cAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCtt                                                              <  8:213456/149‑1 (MQ=255)                                                                                         aaTGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCtt                                                              <  3:219655/148‑1 (MQ=255)                                                                                           tGGACGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCAGTCAGATCTGGAACTTTGAATCAGTGATTACCAATTAGCCATTCGTGATTTTTCGACGTGTTTTCGATGACAGGCCTGCAGGCTTCa                                                            >  8:129862/1‑148 (MQ=255)                                                                                            ggTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTc                                                             <  2:275827/146‑1 (MQ=255)                                                                                            ggTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTc                                                             >  1:275827/1‑146 (MQ=255)                                                                                             gTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGGCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCaaa                                                          <  4:248331/148‑1 (MQ=255)                                                                                             gTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCaaa                                                          <  1:92232/148‑1 (MQ=255)                                                                                             gTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCaaa                                                          <  2:284895/148‑1 (MQ=255)                                                                                                ggATCGTGTTTTTTACGGGGTGTCGA‑AGATTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGAACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAaagg                                                        >  1:202184/1‑147 (MQ=255)                                                                                                gcaTCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAaaggaa                                                      <  4:298642/147‑1 (MQ=255)                                                                                                 gATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCtttt                                                                                   >  8:261298/1‑119 (MQ=255)                                                                                                 gATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCtttt                                                                                   <  7:261298/119‑1 (MQ=255)                                                                                                     gtgtagtttACGGGGGGGCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGa                                                 <  4:275527/143‑1 (MQ=255)                                                                                                     gtgtTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGa                                                 <  7:37060/149‑1 (MQ=255)                                                                                                        ttttttACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGtt                                              >  2:293617/1‑149 (MQ=255)                                                                                                        ttttttAAGAGGTTTCGA‑ACTTTTATGATTTCAAATATATCTGACTCCGTCAGATCTGCCAAATTTAATCAGTTATTACCCATTAGACATTCTTGATGTTTAGACTTCTTTTCTCTCCAAATCCTGAATGCTTCAaaggaatttaatt                                               >  4:23795/1‑141 (MQ=255)                                                                                                            ttACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCt                                           <  7:124706/148‑1 (MQ=255)                                                                                                              aCGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTg                                          >  3:110452/1‑147 (MQ=255)                                                                                                               cGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTa                                        <  2:98051/148‑1 (MQ=255)                                                                                                                gtgttgtAGA‑AGTTTTATGCTTTGAAATATATCTTACTCCGTCAGATCTGGCACTTGGAATCAGTGATTACCCATTAGCCATTCGTTCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAg                                       <  7:129862/144‑1 (MQ=255)                                                                                                                ggggTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGt                                      >  1:132739/1‑149 (MQ=255)                                                                                                                  ggTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTcc                                    >  3:134059/1‑149 (MQ=255)                                                                                                                       cGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGccc                               >  8:21709/1‑149 (MQ=255)                                                                                                                        gA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGccc                               >  6:219131/1‑148 (MQ=255)                                                                                                                        gA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTAGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTATTCCTGacc                               >  8:303036/1‑148 (MQ=255)                                                                                                                            gTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATc                           <  2:303563/149‑1 (MQ=255)                                                                                                                                tATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGAATACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCttt                        <  1:293617/148‑1 (MQ=255)                                                                                                                                   gCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCAc                     <  4:134059/148‑1 (MQ=255)                                                                                                                                    cGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCAATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTg                   >  2:270351/1‑149 (MQ=255)                                                                                                                                       tGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGc                                 <  6:96568/132‑1 (MQ=255)                                                                                                                                       tGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGc                                 >  5:96568/1‑132 (MQ=255)                                                                                                                                          cATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTGCCAgg              >  7:136793/1‑148 (MQ=255)                                                                                                                                              gatCTGACGGAGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTGCCAg               >  8:97452/2‑143 (MQ=255)                                                                                                                                              gatCTGACGGAGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTGCCAg               <  7:97452/142‑1 (MQ=255)                                                                                                                                               atCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTGCCAGGGATc          >  1:161954/1‑147 (MQ=255)                                                                                                                                                  tGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTGCCAGGGATCAAGGc     >  2:295257/1‑149 (MQ=255)                                                                                                                                                  tGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTGCCAGGGATCAAGGc     >  4:128906/1‑149 (MQ=255)                                                                                                                                                   gACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTGCCAGGGATCAAGGCg    >  1:159762/1‑149 (MQ=255)                                                                                                                                                    aCTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTGCCAGGGATCAAg       <  7:21709/145‑1 (MQ=255)                                                                                                                                                      tCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTGCCAGGGATCAAGGCgg   >  2:65526/1‑147 (MQ=255)                                                                                                                                                      tCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTGCCAGGGATCAAGGCgg   <  1:65526/147‑1 (MQ=255)                                                                                                                                                      tCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGACCGATCTTTCACTGCCACGGATCAAGGCGGa  >  3:255733/1‑148 (MQ=255)                                                                                                                                                      tCCGTCAGATCTGGCACTTGGCATCAGTGATTACCAATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCGTGCCCGATCTTTCACTGCCAGGGATCAAGGCGGa  >  6:99552/1‑148 (MQ=255)                                                                                                                                                      |                                                                                                                                                    TGTAGTTTGCTGGCTGGCCTGTTGTTGGGGCCGTGGATGTTCGTGCGGCGCCATGTTGGTCACGGGCCTGGCTTTCCAAACGGGGTGCAATGGTCGGATCGTGTTTTTTACGGGGTGTCGA‑AGTTTTATGCGTTGACATATATCTGACTCCGTCAGATCTGGCACTTGGCATCAGTGATTACCCATTAGCCATTCGTGCTGTTTCGACGTCTTTTCGCTGCCAGGCCTGCAGGCTTCAAAGGAAGGTGAGTTCCTGTAGTCCTGCCCGATCTTTCACTGCCAGGGATCAAGGCGGA  >  NC_002947/2345176‑2345471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑