| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,355,495 | C→T | 5.1% | A172A (GCG→GCA) | PP_2069 ← | multidrug MFS transporter outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,355,495 | 0 | C | T | 5.1% | 366.8 / 5.7 | 118 | A172A (GCG→GCA) | PP_2069 | multidrug MFS transporter outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (60/52); new base T (3/3); total (63/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
Only 100 of 125 total aligned reads displayed.
TGACGCTGGCTGAGTTGCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTCGGCCAGCGTCTG > NC_002947/2355355‑2355641 | tGACGCTGGCTGAGTTGCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAgcg < 6:367500/147‑1 (MQ=255) gACGCTTGCTGAGTTGCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGAGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTg > 8:149570/1‑149 (MQ=255) aCGCTGGCTGAGTTGCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTgg > 2:118566/1‑149 (MQ=255) ctggctgAGTTGCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCTGCGGCGCtagatc < 3:62331/149‑6 (MQ=255) tggctgAGTTGCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTc > 6:234065/1‑149 (MQ=255) ctgAGTTGCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTATGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGc < 8:315865/149‑1 (MQ=255) ctgAGTTGCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGc < 2:232629/149‑1 (MQ=255) tgAGTTGCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTgg < 4:58396/141‑1 (MQ=255) tgAGTTGCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTgg > 3:58396/1‑141 (MQ=255) aGTTGCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCtt < 6:225061/148‑1 (MQ=255) gCACGCTTTGGTTGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCTGCGGCGCtagatc < 6:67011/138‑6 (MQ=255) gCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCTGCGGCGCtagatc > 4:132084/1‑133 (MQ=255) gCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCTGCGGCGCtagatc < 3:132084/138‑6 (MQ=255) gCACGCTTTGGTAGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCTGCGGCGCtagatc > 5:67011/1‑133 (MQ=255) cACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCAccc < 7:149570/149‑1 (MQ=255) aCGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCt > 6:177390/1‑149 (MQ=255) aCGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCt < 6:230493/149‑1 (MQ=255) cTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCtt > 4:135694/1‑139 (MQ=255) cTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCtt < 3:135694/139‑1 (MQ=255) gTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGtt < 2:259341/149‑1 (MQ=255) tCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTg > 1:13852/1‑149 (MQ=255) tCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTg > 2:328107/1‑149 (MQ=255) tCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTg > 7:106973/1‑149 (MQ=255) gAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGa < 2:314015/149‑1 (MQ=255) aGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑t < 2:174578/149‑1 (MQ=255) aGGGTATGCAAGTCCTTCTTCGCTGCCGCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGGCTGGGCGACCACCGGCAGGCGTACCAGATCTACCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑t < 8:337702/149‑1 (MQ=255) gTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑Tggc < 1:118566/149‑1 (MQ=255) tttGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAgcg > 3:230664/1‑113 (MQ=255) tttGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTg < 4:288278/116‑1 (MQ=255) tttGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTg > 3:288278/1‑116 (MQ=255) tttGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑Tggcg > 4:75171/1‑149 (MQ=255) cAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTgg > 7:297475/1‑139 (MQ=255) cAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTgg < 8:297475/139‑1 (MQ=255) aaGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGcgcg > 5:18131/1‑149 (MQ=255) aGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGcgcg > 1:318160/1‑148 (MQ=255) ggCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTa > 5:208994/1‑149 (MQ=255) gCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGc < 6:200828/112‑1 (MQ=255) gCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGc > 5:200828/1‑112 (MQ=255) gCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTgg > 7:136360/1‑149 (MQ=255) cTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGcgccg > 8:242322/1‑95 (MQ=255) cTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGcgccg < 7:242322/95‑1 (MQ=255) cTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGc < 5:177390/149‑1 (MQ=255) cGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGccc > 2:57447/1‑148 (MQ=255) cGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGccc > 2:325548/1‑148 (MQ=255) gCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTAc > 5:49272/1‑140 (MQ=255) gCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTAc > 1:116434/1‑140 (MQ=255) gCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTAc < 6:49272/140‑1 (MQ=255) gCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTAc < 2:116434/140‑1 (MQ=255) tGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGccc > 2:195950/1‑145 (MQ=255) gCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGAt < 1:328107/149‑1 (MQ=255) tCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTc > 1:57574/1‑149 (MQ=255) tCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTc > 5:21183/1‑149 (MQ=255) cAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTc < 6:18131/147‑1 (MQ=255) cgccgcGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGa > 7:20086/1‑148 (MQ=255) cgccgcGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGAt < 5:191129/149‑1 (MQ=255) cgccgcGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGAt < 7:168673/149‑1 (MQ=255) ccgcGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGGTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCGCCAGCTGTCCACCTGATAg > 8:284830/1‑149 (MQ=255) ccgcGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAg < 8:20086/149‑1 (MQ=255) tGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTgg > 5:306479/1‑119 (MQ=255) tGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTgg < 6:306479/119‑1 (MQ=255) cACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAg < 2:13852/149‑1 (MQ=255) aCTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGc < 3:61246/91‑1 (MQ=255) aCTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAgg < 4:314320/149‑1 (MQ=255) aCTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAgg < 5:234065/149‑1 (MQ=255) aCTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAgg < 3:341813/149‑1 (MQ=255) aCTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAgg > 3:149890/1‑149 (MQ=255) tCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCgg < 7:293674/149‑1 (MQ=255) cGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑t < 1:133675/94‑1 (MQ=255) cGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCggg > 5:134147/1‑149 (MQ=255) aTGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGtt > 8:88065/1‑149 (MQ=255) tGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGcccc < 3:269224/111‑1 (MQ=255) tGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGcccc > 4:269224/1‑111 (MQ=255) gTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTg > 7:330044/1‑148 (MQ=255) ggCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACg < 5:70811/146‑1 (MQ=255) ggCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGgcg > 7:305075/1‑149 (MQ=255) ccaccTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTg < 7:88065/149‑1 (MQ=255) cTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTgt < 1:57447/149‑1 (MQ=255) gCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTgtcg > 7:98091/1‑149 (MQ=255) gCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGCCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGATGAATTCCCATTGCGACGGCGCGTTGCTgtcg > 3:260834/1‑149 (MQ=255) ggCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTgtcggtc < 4:211520/149‑1 (MQ=255) tACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCt > 4:69464/1‑149 (MQ=255) aCCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTc > 5:110606/1‑149 (MQ=255) ccAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTg > 1:117347/1‑134 (MQ=255) ccAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTg < 2:117347/134‑1 (MQ=255) ccAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTCg > 2:105236/1‑149 (MQ=255) ccAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTCg < 8:106973/149‑1 (MQ=255) cAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTCgg < 2:72112/149‑1 (MQ=255) aGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTg < 2:136081/119‑1 (MQ=255) gATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCt < 1:198552/133‑1 (MQ=255) gATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTCGGc > 1:242496/1‑148 (MQ=255) aagccaGCGCTGCGGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTCGGc > 3:164384/6‑148 (MQ=255) tCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGa < 7:206697/106‑1 (MQ=255) tCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGa > 8:206697/1‑106 (MQ=255) cTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGtt < 6:9589/127‑1 (MQ=255) cTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGtt > 5:9589/1‑127 (MQ=255) tAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGAGTGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCGGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTCGGCCAGc > 1:74654/1‑149 (MQ=255) tAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTCGGCCAGCg > 4:191183/1‑149 (MQ=255) gcgcCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTGGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTCGGCCAGCGTc < 6:21183/149‑1 (MQ=255) gccgcAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTCGGCCAGCGTCTg < 2:242496/149‑1 (MQ=255) gccgcAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTCGGCCAGCGTCTg < 6:134147/149‑1 (MQ=255) | TGACGCTGGCTGAGTTGCACGCTTTGGTCGAGGGTTTGCAAGGCCTGCTTCGCTGCCTCCAGACGCGCCGCGTAGGTGCACTGGTCGATGTAGGCGCGGGTGGTCTGGGCGACCACCTGCAGGCGTACCAGATCTAGCGCCGCAGCGCTGGCTTCGGCTTGCACCCTGGCACGTTGGA‑TGGCGGCGCGTACCTGGCCCCAGATGTCCACCTGATAGGCCAGCTCGAGGCCCGGGTTGAATTGCCATTGCGACGGCGCGTTGCTGTCGGTCGCCTCGGCCAGCGTCTG > NC_002947/2355355‑2355641 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |