| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,356,511 | C→A | 6.1% | G104V (GGC→GTC) | PP_2070 ← | AraC family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,356,511 | 0 | C | A | 6.1% | 409.4 / 11.0 | 126 | G104V (GGC→GTC) | PP_2070 | AraC family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (56/62); new base A (5/3); total (61/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.31e-01 | |||||||||||
Only 100 of 134 total aligned reads displayed.
GCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGAC > NC_002947/2356363‑2356659 | gcATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATgcgcgc > 7:114566/1‑149 (MQ=255) aTTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGACg > 2:242679/1‑149 (MQ=255) cTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTcgc > 4:248818/1‑149 (MQ=255) tCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGTGACGAAGGCATCGATGCGCCGGGCGCCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCAAGCGCGCCGTcgcg > 8:201808/1‑149 (MQ=255) cAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTcgcg > 1:258193/1‑147 (MQ=255) gggTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAgg < 7:218423/149‑1 (MQ=255) gggTCACGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAATGCATCGATGCGCCGGGCGGCGGCCGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGACGGCGCGCat < 1:79354/149‑2 (MQ=255) ggTCAGGGCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGt < 5:346336/149‑1 (MQ=255) gTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGtt < 2:312363/149‑1 (MQ=255) tCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTc < 2:114059/139‑1 (MQ=255) tCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGtt > 5:276758/1‑148 (MQ=255) tCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGACGGCGCGCatgctc > 4:143255/1‑144 (MQ=255) tCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGCCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTc > 1:114059/1‑139 (MQ=255) aGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGGTCAg > 6:352284/1‑149 (MQ=255) cTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCAccc < 5:320841/149‑1 (MQ=255) cTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCAcc < 8:114566/148‑1 (MQ=255) ggCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGt < 3:240192/148‑1 (MQ=255) cTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGAcgccgc > 5:108975/1‑147 (MQ=255) cTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACgccgcc < 3:248818/148‑1 (MQ=255) cTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGACGGCGCGCatgctc > 6:209981/1‑125 (MQ=255) cTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGACGGCGCGCatgctc < 5:209981/130‑6 (MQ=255) aGGAAGCGCTCGCACCAGGCACGGAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGAt < 1:349506/149‑1 (MQ=255) aGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGAt < 7:242831/149‑1 (MQ=255) ggAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGAt > 1:227538/1‑148 (MQ=255) aGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGt > 6:364191/1‑149 (MQ=255) gcgcTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTcgc > 4:200494/1‑113 (MQ=255) gcgcTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGtt > 8:156508/1‑149 (MQ=255) cgcTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTc < 3:42332/149‑1 (MQ=255) tCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGt > 6:163084/1‑126 (MQ=255) cACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGt > 5:156853/1‑123 (MQ=255) cACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGt < 6:156853/123‑1 (MQ=255) aCCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCgcag > 3:142216/1‑148 (MQ=255) cAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTcgc > 6:40597/1‑142 (MQ=255) cAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTcgc < 5:40597/142‑1 (MQ=255) cACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCa < 2:31549/126‑1 (MQ=255) gCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGa > 5:355957/1‑148 (MQ=255) gCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGa > 1:274851/1‑148 (MQ=255) cAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑TGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGaca > 8:188726/1‑149 (MQ=255) ctgcgtgcctGGTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGacac > 6:194343/3‑149 (MQ=255) tgggtgcTGCGGCGTCGGGACGATGGCATCGATGCGCGGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCAAGGATCAGTTCGCGCAGCAGGCCGTACAcgacga < 6:276758/146‑1 (MQ=255) gcgtgcTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTcgcg > 2:238311/1‑128 (MQ=255) gcgtgcTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTcgcg < 1:238311/128‑1 (MQ=255) gcgtgcTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGAt < 3:32200/149‑1 (MQ=255) gcgtgcTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGAt < 6:346945/149‑1 (MQ=255) gtgcTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGa > 6:97161/1‑149 (MQ=255) tgcGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAgg > 2:12025/1‑129 (MQ=255) tgcGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAgg < 1:12025/129‑1 (MQ=255) gcggcgTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTgg > 6:301409/1‑149 (MQ=255) cggcgTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAgg < 1:99767/85‑1 (MQ=255) cggcgTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAgg > 2:99767/1‑85 (MQ=255) cggcgTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGa < 8:136133/110‑1 (MQ=255) cggcgTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGa > 7:136133/1‑110 (MQ=255) cggcgTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCCCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTgg < 1:112529/148‑1 (MQ=255) ggcgTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAg < 4:139854/107‑1 (MQ=255) ggcgTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAg > 3:139854/1‑107 (MQ=255) ggcgTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTgg > 7:113399/1‑147 (MQ=255) cGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCCGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGtt < 6:108975/149‑1 (MQ=255) cGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGtt < 5:364191/149‑1 (MQ=255) gggACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCa < 1:264270/100‑1 (MQ=255) gggACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCa > 2:264270/1‑100 (MQ=255) gggACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTTGCAGCGTTc > 2:44394/1‑149 (MQ=255) gggACGAAGGCATCGATGCGCCGCGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTc > 2:191450/1‑149 (MQ=255) gACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGa < 4:298799/149‑1 (MQ=255) gAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCACCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGAtgt > 8:223393/1‑149 (MQ=255) tCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATc < 5:279536/149‑1 (MQ=255) tCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATc < 4:142216/149‑1 (MQ=255) gATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGt > 8:1996/1‑133 (MQ=255) gATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGt < 7:1996/133‑1 (MQ=255) aTGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGCCGATGACCTGGCAGCGTTCGAGGTGGGCAGCGag > 8:339476/1‑149 (MQ=255) gcCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGTAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGagcag > 3:304128/1‑148 (MQ=255) ggcggcgg‑cGAGTTCGTACAGGATCAGAGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAgg > 5:93300/1‑149 (MQ=255) gcggcgg‑cgAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGt < 6:74255/149‑1 (MQ=255) gcggcgg‑cgAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGt < 7:145121/149‑1 (MQ=255) cggcgg‑cgATTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCATCACCCGTGACGCCGCCAGGATCAGTTCGCTCAGCAGTCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTg < 1:44394/149‑1 (MQ=255) g‑cgAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCTGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGag < 6:21476/134‑1 (MQ=255) cgAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGTAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATg < 7:81261/149‑1 (MQ=255) aGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGTAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCa < 4:304128/149‑1 (MQ=255) aGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGc < 7:188726/148‑1 (MQ=255) aGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCa < 5:194343/149‑1 (MQ=255) cGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGAc < 7:156508/148‑1 (MQ=255) gTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCa < 2:51931/149‑1 (MQ=255) tACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCAc > 7:13345/1‑149 (MQ=255) aCAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACg > 8:145727/1‑149 (MQ=255) aCAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACg > 4:37336/1‑149 (MQ=255) gATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCtt > 5:256055/1‑149 (MQ=255) aTCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCtt > 1:180492/1‑148 (MQ=255) tCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACacga > 4:265419/1‑84 (MQ=255) tCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACacga < 3:265419/84‑1 (MQ=255) aGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCAt < 5:301409/149‑1 (MQ=255) cgcCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGc > 4:90358/1‑149 (MQ=255) gcCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTGCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCg > 1:99605/1‑149 (MQ=255) cccGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCg > 1:45437/1‑148 (MQ=255) cGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCACCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGat < 7:223393/149‑1 (MQ=255) gCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGatggc < 5:97161/149‑1 (MQ=255) cATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGtt < 2:279162/90‑1 (MQ=255) gcgcCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCACGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCt > 7:327521/1‑149 (MQ=255) gcgcCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGatggcatgg < 7:328968/147‑1 (MQ=255) gcgcCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGatggcatgg > 8:328968/1‑147 (MQ=255) gcgcCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCt < 2:45437/149‑1 (MQ=255) ccGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGAc < 8:13345/149‑1 (MQ=255) | GCATTGCTCCAGGGTCAGGTCCTGGGCCGGGTCCTGCAGGAAGCGCTCGCACCAGGCACGCAGGCGTGCGTGCTGCGGCGTCGGGACGAAGGCATCGATGCGCCGGGCGGCGG‑CGAGTTCGTACAGGATCAGCGCCCGAGCATGCGCGCCGTCGCGCAGGTTCAGCACCCGTGACGCCGCCAGGATCAGTTCGCGCAGCAGGCCGGACACGACGATGACCTGGCAGCGTTCGATGTGGGCATCGAGCAGCAAGGTGCGCATGCAGACCACGCCTTTCATGCGGATGGCATGGCTGAC > NC_002947/2356363‑2356659 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |