| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,438,202 | G→C | 5.4% | K374N (AAG→AAC) | fadB → | enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,438,202 | 0 | G | C | 5.4% | 406.3 / 6.4 | 123 | K374N (AAG→AAC) | fadB | enoyl‑CoA hydratase/3‑hydroxyacyl‑CoA dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base G (57/59); new base C (2/5); total (59/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.50e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
GGCGGCGGTATCGCCTACCAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGCGGAAGTGGAAGGCCAGGTGAAGGACGATGCGA > NC_002947/2438056‑2438350 | cggcggTATCGCCTACCAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATgg > 8:250515/1‑149 (MQ=255) cggTATCGCCTACCAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCTCGGCCATCTTGGCCg < 2:74386/149‑1 (MQ=255) cggTATCGCCTACCAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGcc > 3:310580/1‑148 (MQ=255) gTATCGCCTACCAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCATCTTGGCCggg < 5:227884/149‑3 (MQ=255) gTATCGCCTACCAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAg < 1:35058/149‑1 (MQ=255) tATCGCCTACCAGTTGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCATCTTGGCCgggg < 1:75726/149‑1 (MQ=255) tATCGCCTACCAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCATCTTGGCCgggg < 8:33069/149‑1 (MQ=255) tCGCCTACCAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCATCTTGGCCgg > 4:101870/1‑144 (MQ=255) tCGCCTACCAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCATCTTGGCCgg < 3:101870/145‑2 (MQ=255) ccTACCAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCt > 6:237345/1‑148 (MQ=255) ccAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAAc < 7:250515/148‑1 (MQ=255) ccAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAAc < 2:33410/148‑1 (MQ=255) cAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGc > 6:85745/1‑149 (MQ=255) cAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGc > 1:154949/1‑149 (MQ=255) tCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCAt > 8:104220/1‑149 (MQ=255) tCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCAAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCAt > 6:259430/1‑149 (MQ=255) ggcggTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTc < 1:5932/149‑1 (MQ=255) gcggTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCg > 1:180972/1‑149 (MQ=255) cggTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGc < 8:135960/149‑1 (MQ=255) cAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGa > 8:190393/1‑126 (MQ=255) cAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGa > 5:181239/1‑149 (MQ=255) aaaGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATg < 1:150004/120‑1 (MQ=255) aaaGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAg > 8:167292/1‑126 (MQ=255) aaaGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGAc < 4:163641/149‑1 (MQ=255) aaGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGccc < 4:78739/145‑1 (MQ=255) aaGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGccc > 3:78739/1‑145 (MQ=255) aaGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGAcc < 5:189587/149‑1 (MQ=255) ggTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCt > 7:171247/1‑149 (MQ=255) ggTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAACTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCt < 5:237345/149‑1 (MQ=255) gTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTg < 2:154949/149‑1 (MQ=255) cGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTc < 1:139866/148‑1 (MQ=255) cGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTc < 2:180972/148‑1 (MQ=255) gCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTcc > 7:46834/1‑148 (MQ=255) gCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTcc > 5:53858/1‑148 (MQ=255) gATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATg > 5:36957/1‑149 (MQ=255) tCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGc < 3:116769/149‑1 (MQ=255) ccTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTc < 6:248111/128‑1 (MQ=255) gatgaAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGt < 2:227285/137‑1 (MQ=255) gatgaAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGt > 1:227285/1‑137 (MQ=255) gatgaAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATg > 2:224698/1‑143 (MQ=255) atgaAGGACATCCGCGAGGTAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTc < 2:69330/137‑1 (MQ=255) atgaAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAACGGAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGCCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTc > 1:69330/1‑138 (MQ=255) tgaAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGcc > 3:73968/1‑110 (MQ=255) aGGACATCCGCGCGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGCTGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGcc < 6:67219/149‑1 (MQ=255) aGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGGCGAGAAGGGCCGCCTGACACCGGCCAACATGGCCGAGCCCCTCAACGCCATTCGCCCGACCCTGTCCAATGGCGATTTCGc > 7:316370/1‑148 (MQ=255) tCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTc < 3:228255/149‑1 (MQ=255) ccGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTc > 7:186518/1‑148 (MQ=255) gcgAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGa > 1:356893/1‑148 (MQ=255) cgAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACa > 6:69124/1‑149 (MQ=255) gAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACAtcgt > 4:182148/1‑149 (MQ=255) gCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACAtcgtcgt < 4:45458/149‑1 (MQ=255) gCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACAtcgtcgt < 3:268557/149‑1 (MQ=255) ccATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACAtcgtcgtc < 6:138329/149‑1 (MQ=255) aTTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGa < 5:85745/149‑1 (MQ=255) aGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCt > 3:190841/1‑149 (MQ=255) aGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCt > 5:269466/1‑149 (MQ=255) gTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGCCCCTGTCCTATGGCGATTTCGCCAATGTCGACATTGTCGTCGAGGCTGTGGTc > 6:75572/1‑149 (MQ=255) tCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCaa > 2:44970/1‑120 (MQ=255) tCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCaa < 1:44970/120‑1 (MQ=255) aaC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCga < 5:259430/146‑1 (MQ=255) gCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGaa < 4:190841/149‑1 (MQ=255) ccTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGaa < 5:248597/148‑1 (MQ=255) cTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAgg > 4:31378/1‑149 (MQ=255) cTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAgg > 4:259995/1‑149 (MQ=255) cTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGCTCGAGAACCCGAAgg > 7:192192/1‑149 (MQ=255) tCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGt > 6:203014/1‑149 (MQ=255) aaGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTc > 7:38057/1‑147 (MQ=255) aaGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTc > 4:118249/1‑147 (MQ=255) aGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTcaag < 3:31378/149‑1 (MQ=255) aGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTcaag < 8:186518/149‑1 (MQ=255) aGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTcaag < 2:50553/149‑1 (MQ=255) gTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTcaag > 8:35572/1‑148 (MQ=255) ttGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTcaagc > 6:108565/1‑148 (MQ=255) gCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTcaagcaag > 2:44988/1‑149 (MQ=255) cTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTcaagcaag < 6:36957/148‑1 (MQ=255) cTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCaagcaagc < 3:118249/149‑1 (MQ=255) ttGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCtgtg > 1:72731/1‑122 (MQ=255) ttGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCtgtg < 2:72731/122‑1 (MQ=255) ttGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCg > 1:13286/1‑149 (MQ=255) ggCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGa > 6:220169/1‑113 (MQ=255) ggCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGa < 5:220169/113‑1 (MQ=255) ggCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCg < 8:46834/147‑1 (MQ=255) gCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTa > 8:135487/1‑149 (MQ=255) ccGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTgg < 6:53858/149‑1 (MQ=255) cgcgTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGc < 4:310580/149‑1 (MQ=255) gcgTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGCg < 8:38057/149‑1 (MQ=255) cgTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGCgg < 6:269466/149‑1 (MQ=255) cgTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACACTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTg > 6:135459/1‑145 (MQ=255) cgTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACACTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTg < 5:135459/145‑1 (MQ=255) gagaAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGCGGAAg < 3:182148/148‑1 (MQ=255) gagaAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGCGGAAGt < 5:108565/149‑1 (MQ=255) agaAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCgg < 4:130573/135‑1 (MQ=255) agaAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCgg > 3:130573/1‑135 (MQ=255) agaAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGc > 5:13751/1‑142 (MQ=255) agaAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGc < 6:13751/142‑1 (MQ=255) cgccTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGCGGAAGTGGAAGGCCa < 7:35572/149‑1 (MQ=255) cTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGCGGAAGTGGAAGGCCAGGt < 5:69124/149‑1 (MQ=255) cccGGCCAAGATGGCCGAGGCCCTCAACGCCTTTCTCGCGACCCTGTCCTATGGCGTTTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCTGTACTGGCGGAAGTGGAAGGCCAGGTGAAg < 8:192192/148‑1 (MQ=255) cccGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGCGGAAGt > 5:305621/1‑132 (MQ=255) cccGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGCGGAAGt < 6:305621/132‑1 (MQ=255) | GGCGGCGGTATCGCCTACCAGTCGGCGGTCAAAGGTACGCCGATCCTGATGAAGGACATCCGCGAGGAAGCCATTCAGCTGGGTCTGAAC‑GAGGCCTCCAAGTTGCTTGGCAACCGCGTCGAGAAGGGCCGCCTGACCCCGGCCAAGATGGCCGAGGCCCTCAACGCCATTCGCCCGACCCTGTCCTATGGCGATTTCGCCAATGTCGACATCGTCGTCGAGGCTGTGGTCGAGAACCCGAAGGTCAAGCAAGCGGTACTGGCGGAAGTGGAAGGCCAGGTGAAGGACGATGCGA > NC_002947/2438056‑2438350 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |