| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,454,312 | C→A | 9.8% | S269S (TCG→TCT) | mfd ← | transcription‑repair coupling factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,454,312 | 0 | C | A | 9.8% | 326.5 / 16.6 | 109 | S269S (TCG→TCT) | mfd | transcription‑repair coupling factor |
| Reads supporting (aligned to +/- strand): ref base C (55/43); new base A (6/5); total (61/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 112 total aligned reads displayed.
CTCGGCCGGCGGCAACAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCTTGAAGCGGGTCACTTCTTCCTTCT > NC_002947/2454165‑2454460 | cTCGGCCGGCGGCAACAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTc > 7:149002/1‑148 (MQ=255) ggccggcGGCAACAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGa < 1:310689/147‑1 (MQ=255) ggccggcGGCAACAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAgg > 5:323012/1‑149 (MQ=255) ggccggcGGCAACAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAgg > 3:20010/1‑149 (MQ=255) cggcggCAACAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGttt > 7:65580/1‑149 (MQ=255) gcggcAACAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCAAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTttct < 1:280666/149‑1 (MQ=255) cggcAACAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGGAGGTAGTCGAACAGGGTCGAGGTttctt > 2:350776/1‑149 (MQ=255) ggcAACAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTttcttc < 6:323012/149‑1 (MQ=255) ggcAACAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTttcttc < 4:20010/149‑1 (MQ=255) aaCAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCgaa > 7:279799/1‑149 (MQ=255) aCAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCgaa < 1:58358/148‑1 (MQ=255) aCAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCg > 2:58358/1‑146 (MQ=255) cAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCgaaga < 7:215562/149‑1 (MQ=255) gCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCgaagaa > 2:288392/1‑148 (MQ=255) ggccggcTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAg < 1:288392/149‑1 (MQ=255) gcTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCg < 2:284205/136‑1 (MQ=255) cTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAg > 3:301068/1‑149 (MQ=255) aGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAgg > 6:32685/1‑147 (MQ=255) aGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGgta < 5:32685/149‑1 (MQ=255) tCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCgaa > 1:322944/1‑131 (MQ=255) tCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAgg > 5:35675/1‑144 (MQ=255) gcggcgGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGa < 8:272092/149‑1 (MQ=255) cggTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTAGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATAcc > 8:279030/1‑149 (MQ=255) cggTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGAGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATAcc > 3:56149/1‑149 (MQ=255) cATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGgtag > 5:323743/1‑131 (MQ=255) cATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGgtag < 6:323743/131‑1 (MQ=255) aTAACGCCCGCGCACGTCGTTTCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCgaa < 7:11534/114‑1 (MQ=255) aTAACGCCCGCGCACGTCGTTTCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCgaa > 8:11534/1‑114 (MQ=255) aCGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAg < 1:323731/117‑1 (MQ=255) aCGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAg > 2:323731/1‑117 (MQ=255) gCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGgatgat < 4:287953/148‑1 (MQ=255) gCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGgatgat > 3:287953/1‑148 (MQ=255) ccGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGt > 3:311625/1‑98 (MQ=255) ccGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGt < 4:311625/98‑1 (MQ=255) cgcgCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCg < 8:149002/149‑1 (MQ=255) gtcgtTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCa < 1:222496/149‑1 (MQ=255) gtcgtTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGACGTTTCTTCGAAGCACAGTGGCAGGTAGTTCTCGATACCGGCGGGGATGATGCCGCTgga > 7:280399/1‑146 (MQ=255) gtTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGt > 4:173038/1‑149 (MQ=255) cAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTAGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTg < 4:232814/149‑1 (MQ=255) aGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCt > 6:145508/1‑136 (MQ=255) aGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCt < 5:145508/136‑1 (MQ=255) gTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTAGAGGTTTCTTCgaa > 5:345741/1‑87 (MQ=255) gTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTAGAGGTTTCTTCgaa < 6:345741/87‑1 (MQ=255) tGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGAt > 2:174907/1‑149 (MQ=255) cTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTg > 6:364822/1‑149 (MQ=255) cTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTg < 3:321700/149‑1 (MQ=255) cTCGGCGGCCTGTTCCACACCGGGTAGAGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTg < 4:56149/149‑1 (MQ=255) tCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAgg > 7:24015/1‑96 (MQ=255) tCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAgg < 8:24015/96‑1 (MQ=255) ggcggcCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGGAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCAc < 1:350776/149‑1 (MQ=255) gcCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCTCTGGCCAGGTCCTGGAAGATTGCACTgcg > 4:39543/1‑149 (MQ=255) ccTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTgcgg < 5:364822/149‑1 (MQ=255) tGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTGGTCGAACAGGGTCGAGGTTTCTTCgaa > 1:79389/1‑74 (MQ=255) tGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCgaa < 2:79389/74‑1 (MQ=255) ttCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGcggcgg > 4:297960/1‑148 (MQ=255) cacaCCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGt > 2:296988/1‑149 (MQ=255) cacCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTc > 2:14361/1‑148 (MQ=255) cacCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTc > 3:163225/1‑148 (MQ=255) acCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGa > 8:278574/1‑149 (MQ=255) ccGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTAGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGAc < 7:279030/149‑1 (MQ=255) ccGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTAGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGAc < 7:54181/149‑1 (MQ=255) cGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACg > 4:329012/1‑149 (MQ=255) cGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTAGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAg < 5:296291/143‑1 (MQ=255) cGGGTAGCGAGAACACCTGGGAGTCGGTCGGCAGGTAGTCGAACAGGGTAGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCGAGGTCCTGGAAGATTGCACTGCGGCGGAAg > 6:296291/1‑143 (MQ=255) gggTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATAGCACTGCGGCGGAAGTCGACGt > 2:45913/1‑149 (MQ=255) gCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGaa < 1:174907/148‑1 (MQ=255) gagaACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAgcg > 5:143688/1‑149 (MQ=255) gagaACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAgcg > 6:332978/1‑149 (MQ=255) gaACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCt > 2:327732/1‑149 (MQ=255) cacCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTcgc > 2:244009/1‑149 (MQ=255) acCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGaa > 7:162936/1‑140 (MQ=255) acCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGaa < 8:162936/140‑1 (MQ=255) acCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGa > 2:194367/1‑139 (MQ=255) acCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGa < 1:194367/139‑1 (MQ=255) cTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGa > 1:124329/1‑148 (MQ=255) tGGGTGTCGGTCGGCAGGTAGTGGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGa > 7:224640/1‑147 (MQ=255) gtgtCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACcggcgg > 2:178152/1‑76 (MQ=255) gtgtCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACcggcgg < 1:178152/76‑1 (MQ=255) tgtCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGt > 7:314292/1‑149 (MQ=255) tcggtcggCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTg < 8:279799/148‑1 (MQ=255) tcggtcggCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGc < 1:14361/149‑1 (MQ=255) tcggtcggCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGc > 4:247191/1‑149 (MQ=255) tcggtcggCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGc > 2:72655/1‑149 (MQ=255) tcggtcggCAGGCAGTCGCACAGGGTCGAGGTTGCTTCGAAGAACAGTGGGAGGTAGTACTCGATACCGGCGGTGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTg < 2:54010/148‑1 (MQ=255) cggtcggCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGcc > 4:98275/1‑149 (MQ=255) ggtcggCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATCGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCt < 1:45913/149‑1 (MQ=255) gtcggCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCtt > 3:4747/1‑149 (MQ=255) cAGGTAGTCGAACAGGGTAGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCTTGAAGc > 3:143698/1‑149 (MQ=255) gTAGTCGAACAGGGTCGAGGTTTCTTCGATGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCTTGAAGCcgg > 8:165354/1‑149 (MQ=255) tAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCTTGAAGCGGGt > 7:208536/1‑149 (MQ=255) gTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCGTTGAAGCGGGTCa > 4:272184/1‑149 (MQ=255) gTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCTTGAAGCGGGTc < 1:244009/148‑1 (MQ=255) gAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGc > 6:74997/1‑132 (MQ=255) gAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGc < 5:74997/132‑1 (MQ=255) aaCAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCTTGAAGCGGGTCActtc < 6:143688/149‑1 (MQ=255) aaCAGGGTAGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCTTGAAGCGGGTCActtc > 3:1173/1‑149 (MQ=255) cAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCTTGAAGCGGGTCActtctt > 7:34252/1‑149 (MQ=255) aGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCTTGAAGCGGGTCACttcttc > 1:199163/1‑149 (MQ=255) cGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCTTGAAGCGGGTCACTTCTTCCTTCt < 3:297960/149‑1 (MQ=255) cGAGGTTTCTTCGAAGAACAGTGGCAGGTACTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCTTGAAGCGGGTCACTTCTTCCTTCt < 4:301068/149‑1 (MQ=255) | CTCGGCCGGCGGCAACAGCGGCCGGCTGAGGTCGCCGCGGCGGTCTTCATAACGCCCGCGCACGTCGTTCCAGAAGTGCTCGGCGGCCTGTTCCACACCGGGTAGCGAGAACACCTGGGTGTCGGTCGGCAGGTAGTCGAACAGGGTCGAGGTTTCTTCGAAGAACAGTGGCAGGTAGTACTCGATACCGGCGGGGATGATGCCGCTGGCCAGGTCCTGGAAGATTGCACTGCGGCGGAAGTCGACGTCGAAGCGCTCGCGAAAGCGTGCCTTGAAGCGGGTCACTTCTTCCTTCT > NC_002947/2454165‑2454460 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |