| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,486,831 | C→T | 5.8% | intergenic (+64/‑120) | spuC‑I → / → PP_2181 | polyamine:pyruvate transaminase/Cro/CI family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,486,831 | 0 | C | T | 5.8% | 417.6 / 9.0 | 137 | intergenic (+64/‑120) | spuC‑I/PP_2181 | polyamine:pyruvate transaminase/Cro/CI family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (68/60); new base T (4/4); total (73/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.46e-01 | |||||||||||
Only 100 of 138 total aligned reads displayed.
GCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCATGAAAGTGCACGAAGAAATCGAAGGCC > NC_002947/2486683‑2486978 | gCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTc < 8:315495/149‑1 (MQ=255) cTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCg < 4:79786/149‑1 (MQ=255) tGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCg > 5:73575/1‑149 (MQ=255) cAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGAt < 4:153913/143‑1 (MQ=255) cAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGAt > 3:153913/1‑143 (MQ=255) tATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGTCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTgccgc < 3:109077/149‑1 (MQ=255) gAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATc > 1:133150/1‑149 (MQ=255) aaGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCg > 3:299109/1‑149 (MQ=255) agagATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTTGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCTCCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGt < 5:140245/149‑1 (MQ=255) gacgaACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTc < 1:132460/149‑1 (MQ=255) gacgaACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTc < 2:66132/149‑1 (MQ=255) gaACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCGAGCACCGCGCAGGCGGTGCTTGATctcaca > 1:338544/1‑125 (MQ=38) gaACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCGAGCACCGCGCAGGCGGTGCTTGATctcaca < 2:338544/130‑6 (MQ=38) ggtggAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGTGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAgg > 2:175469/1‑149 (MQ=255) gtggAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCg > 2:24881/1‑120 (MQ=255) gagaAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCAcc > 2:77019/1‑149 (MQ=255) gagaAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCAcc > 2:3240/1‑149 (MQ=255) agaAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCt > 7:93894/1‑149 (MQ=255) aaaGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTc < 7:88626/149‑1 (MQ=255) aaaGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTc > 2:64251/1‑149 (MQ=255) cGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGc < 6:181550/146‑1 (MQ=255) cGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCaaa < 3:244391/149‑1 (MQ=255) cGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATAGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCaaa < 1:160430/149‑1 (MQ=255) aaGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCa > 2:322623/1‑149 (MQ=255) aaGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCa > 4:261149/1‑149 (MQ=255) gTGCCTTGACCTGACCTATGAGTCTGTTCGGTAACATCAGAGGGCCTGTTTAGCTGTTCTCAGAACCTGTTAGATCATGCACCGCCTGCGCGGTTCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCAtt < 1:245513/149‑1 (MQ=255) gCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCaaa < 7:284400/142‑1 (MQ=255) gCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGAACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCaaa > 8:284400/1‑142 (MQ=255) gacctgacctATGAGGCTGTTCGGTAACAGCAGTGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCtt < 1:175469/148‑1 (MQ=255) gacctgacctATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCttt < 8:93894/149‑1 (MQ=255) tgaccaATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTATGCTTtctg > 2:159841/1‑148 (MQ=255) acctATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGa < 5:92095/147‑1 (MQ=255) ccgaTGAGGCTGTTCGGTAACAGAAGAGGGCCGGGTTTGCTGGTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAAt < 8:273715/146‑1 (MQ=255) aTGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGaa > 1:80827/1‑149 (MQ=255) aGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAAt > 3:289414/1‑143 (MQ=255) ggCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCg < 3:309397/119‑1 (MQ=255) gCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAAt < 6:141893/141‑1 (MQ=255) cTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTg > 7:109167/1‑148 (MQ=255) tGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGGCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCttt < 4:46993/132‑1 (MQ=255) tGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGt > 4:123931/1‑148 (MQ=255) tGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTa < 5:249967/149‑1 (MQ=255) gTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCaaa < 1:320805/119‑1 (MQ=255) ttCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTa < 6:73575/147‑1 (MQ=255) ttCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTAc < 5:346156/148‑1 (MQ=255) tAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCGTCGTACATTTCACGTCAGGCACCTTCCGCAAAGCAttt > 4:101289/1‑119 (MQ=255) aCAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTg < 1:64251/148‑1 (MQ=255) agcagAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCtt > 6:148805/1‑120 (MQ=255) agcagAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCtt < 5:148805/120‑1 (MQ=255) gcagAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCAt < 5:13960/77‑1 (MQ=255) gcagAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCAt > 6:13960/1‑77 (MQ=255) agagGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGc < 1:122596/108‑1 (MQ=255) agagGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGc > 2:122596/1‑108 (MQ=255) ggCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCAtt < 1:3240/149‑1 (MQ=255) cTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGc > 1:172575/1‑96 (MQ=255) cTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGc < 2:172575/96‑1 (MQ=255) cTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTcc > 4:65808/1‑149 (MQ=255) ttAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTc > 2:285107/1‑149 (MQ=255) ttAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTc < 3:123931/149‑1 (MQ=255) aGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCt < 4:295772/148‑1 (MQ=255) aGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCt > 5:285632/1‑148 (MQ=255) aGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCAATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCATTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCt > 6:89665/1‑148 (MQ=255) gCTGTTCTCAGCACCTGTGTGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTg < 4:202953/148‑1 (MQ=255) gCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGAAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTg > 4:15569/1‑148 (MQ=255) tcAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTc > 7:254720/1‑139 (MQ=255) aGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGa > 1:318451/1‑149 (MQ=255) gCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGAt < 1:322623/149‑1 (MQ=255) aCCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGAtt > 5:95427/1‑148 (MQ=255) aCCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGAtt > 6:230209/1‑148 (MQ=255) ccTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTGAGGCACCGTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCTTTTCCCGTCTGAAAGTCGCGATTCa < 1:159841/149‑1 (MQ=255) cTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCaa > 1:272358/1‑149 (MQ=255) cTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCaa < 6:285632/149‑1 (MQ=255) accgaTCGAGCACCGCGCAGGCTGTGCTTGATCGGTGCCGCCTTCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGaaa < 7:95659/131‑1 (MQ=255) gagaTCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCAt > 3:189137/1‑149 (MQ=255) agaTCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCa < 8:116308/114‑1 (MQ=255) agaTCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCa > 7:116308/1‑114 (MQ=255) gaTCGAGCACCGCGCAGGCGGTGCTTGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGaaa < 2:148880/131‑1 (MQ=255) gaTCGAGCACCGCGCAGGCGGTGCTTGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCATg > 2:124988/1‑148 (MQ=255) gaTCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCATg > 7:291571/1‑148 (MQ=255) gaTCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCAACGTACATTTCACGTCAGGCACCGTCCGCAAAGCATTTTGGTTTGTGAAATGAATCATGTGCTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAAACATg > 4:295069/1‑148 (MQ=255) aTCGAGCACCGCGCAGGCGGTGCTTGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCt > 4:337532/1‑126 (MQ=255) aTCGAGCACCGCGCAGGCGGTGCTTGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCt < 3:337532/126‑1 (MQ=255) aTCGAGCACCGCGCAGGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAg < 3:277617/131‑1 (MQ=255) aTCGAGCACCGCGCAGGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAg > 4:277617/1‑131 (MQ=255) tCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCATGaaa < 3:261149/149‑1 (MQ=255) tCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCATGaaa < 2:80827/149‑1 (MQ=255) aaGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATTAATCCTGTACTTTTCTGGGCATCCATTTccc < 1:303997/119‑1 (MQ=255) aaGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATAAATCCTGTACTTTTCTGGGCATCCATTTccc > 2:303997/1‑119 (MQ=255) aGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCATGAAAGTg < 2:318451/149‑1 (MQ=255) gCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCTCGATTCAACCATGAAAGTg > 3:203/1‑148 (MQ=255) gCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACGATGAAATTg > 5:241342/1‑148 (MQ=255) cACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAAt > 8:188738/1‑88 (MQ=255) cACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAAt < 7:188738/88‑1 (MQ=255) aCCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTAACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGATATGAATCCTGTACTTTTCTCGGCATCCATTTCCAGTCTGAAAGTCGCGATGCAACCATGAAAGTGCAc > 7:57342/1‑149 (MQ=255) cGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTcc < 5:170849/112‑1 (MQ=255) cgcgGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGTAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCATGAAAGTGCACGAAGaaa < 3:15569/148‑1 (MQ=255) gcgGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCt > 8:62407/1‑91 (MQ=255) gTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCATGAAAGTGCACGAAGAAATCg > 7:196542/1‑147 (MQ=255) gTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCATGAAAGTGCACGAAGAAATCGaa < 4:265809/149‑1 (MQ=255) tCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCATGAAAGTGCACGAAGAAATCGAAGGcc > 2:87007/1‑149 (MQ=255) tCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCATGAAAGTGCACGAAGAAATCGAAGGcc > 5:325841/1‑149 (MQ=255) | GCTGGTGATCAGTATCGAAGAGATCGACGAACTGGTGGAGAAAGCCCGCAAGTGCCTGGACCTGACCTATGAGGCTGTTCGGTAACAGCAGAGGGCCTGGTTAGCTGTTCTCAGCACCTGTGAGATCAAGCACCGCCTGCGCGGTGCTCGATCGGTGCCGCCATCGTACATTTCACGTCAGGCACCTTCCGCAAAGCATTTTGCTTTGTGAAATGAATCCTGTACTTTTCTGGGCATCCATTTCCCGTCTGAAAGTCGCGATTCAACCATGAAAGTGCACGAAGAAATCGAAGGCC > NC_002947/2486683‑2486978 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |