| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 197,551 | C→G | 7.6% | T1019T (ACC→ACG) | PP_0168 → | putative surface adhesion protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 197,551 | 0 | C | G | 7.6% | 218.6 / 6.4 | 76 | T1019T (ACC→ACG) | PP_0168 | putative surface adhesion protein |
| Reads supporting (aligned to +/- strand): ref base C (36/34); new base G (3/3); total (39/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCG > NC_002947/197410‑197698 | gATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCg > 1:145843/1‑149 (MQ=37)gATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCg > 2:13332/1‑149 (MQ=37) aTCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGt < 7:91927/149‑1 (MQ=37) tCAACGACTCGGCCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGtt < 1:124072/149‑1 (MQ=37) aaCGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑Ca < 8:175272/139‑1 (MQ=37) aaCGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑Ca > 7:175272/1‑139 (MQ=37) aCGACTCGGTCGATGCCACCACCGCTACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGaa < 6:161033/149‑1 (MQ=37) aCGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTg > 1:45791/1‑147 (MQ=37) gACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGc > 1:52466/1‑149 (MQ=37) cTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCg > 2:218521/1‑149 (MQ=37) cTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCg < 6:73576/149‑1 (MQ=37) ggTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCTAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCgg < 6:254482/147‑1 (MQ=37) gTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGc > 5:189072/1‑147 (MQ=37) gTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCaa < 2:52466/149‑1 (MQ=37) ccACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGAc < 4:350258‑M2/143‑1 (MQ=255) ccACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGAc > 3:350258‑M2/3‑145 (MQ=255) cACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAgg < 1:13332‑M2/148‑1 (MQ=255) accaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑Ta < 1:249933/124‑1 (MQ=38) accaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑Ta > 2:249933/1‑124 (MQ=38) accaccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAggg > 6:198091/1‑149 (MQ=37) caccGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCATGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGGAAAACCCAGGGCa > 4:191405/1‑149 (MQ=255) cccTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGAt < 3:210442/149‑1 (MQ=37) ccTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGAtt > 2:70374/1‑149 (MQ=37) ccTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGAtt > 7:233782/1‑149 (MQ=37) tGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTc > 1:145555/1‑149 (MQ=37) aCGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCa < 1:218521/149‑1 (MQ=37) cGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAg < 7:317872/149‑1 (MQ=37) ggCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGa < 4:46011/149‑1 (MQ=37) gCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGt < 6:234129/110‑1 (MQ=40) gCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGt > 5:234129/1‑110 (MQ=40) ccGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGc < 5:208763/149‑1 (MQ=37) cGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGc > 8:158444/1‑148 (MQ=37) tCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGaa < 6:189072/149‑1 (MQ=37) tCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGAc > 5:79825/1‑149 (MQ=37) tCACCGAAGGCGGCGTGATCACCTACACCCTGATCCTGAGCAATCCTGCCCAGACCCCGGTAACCGTGACACTGTACAACCGCCAAAC‑CAT‑TACCGATGAACCCGGCAAGACACAGGGCAGCGTCGATTTCCAGACCCCGGCGAAAGAc > 2:115454/1‑149 (MQ=11) cACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACg > 8:34464/1‑149 (MQ=37) ccGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCgg > 3:215174/1‑103 (MQ=40) ccGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCgg < 4:215174/103‑1 (MQ=40) gAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTa < 5:198091/149‑1 (MQ=37) aTCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGtt < 6:79825/148‑1 (MQ=37) aTCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTc < 6:264179/149‑1 (MQ=37) acacCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGt > 1:219311/1‑148 (MQ=21) cacCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCa < 2:219311/149‑1 (MQ=21) acCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAg > 4:141526/1‑149 (MQ=21) acCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAg > 7:121864/1‑149 (MQ=21) ccGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGc < 2:145843/149‑1 (MQ=39) cGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTcc > 6:287899/1‑104 (MQ=40) cGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTcc < 5:287899/104‑1 (MQ=40) tCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCCGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTcctc > 4:197942/1‑140 (MQ=255) tCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGc < 3:197942/143‑1 (MQ=38) ccTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTacaac < 6:291217/124‑1 (MQ=35) ccTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTacaac > 5:291217/1‑124 (MQ=35) ccTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGAGTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTGCGACCGTCAGCGTAAccc > 5:269559/1‑148 (MQ=255) cTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCAt > 2:288770/1‑149 (MQ=37) gAGCAATCCTGCCCAGACGCCGGTACCCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACCGTGCGACCGTCAGCGTCCCCATc > 6:258774/1‑148 (MQ=11) aGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATc > 2:106827/1‑147 (MQ=37) aGCAATCCTCCCCACACGCCGGAAACCGTGACCCTGTCAAACGCCAAAACACATCTACCGTTTACAGCGTCTAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATc < 1:115454/149‑1 (MQ=11) aTCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAAc < 2:145555/149‑1 (MQ=37) cccAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCg < 3:140958/138‑1 (MQ=17) cccAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACCGTCAGCGTCACCATCg > 4:140958/1‑138 (MQ=17) cAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAAC‑GAT‑TACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGCCTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAgg > 3:89729/1‑149 (MQ=11) cAGACGCCGGTGACCGTGACCCTGTCCAACGGCCAAAC‑GAT‑TACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAgg < 2:354286/149‑1 (MQ=255) cAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAgg > 7:89401/1‑149 (MQ=37) tAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCTGCGAATGACTTCTACAACAACGGTTCTACCGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTc < 5:258774/149‑1 (MQ=9) aCCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGAGTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGa < 1:70374/149‑1 (MQ=21) aCCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGa < 8:233782/149‑1 (MQ=34) aCCGTGACCATGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGTCGGCAATACCCAGGGCAGCTTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGa < 1:296496/149‑1 (MQ=255) ccGTGACCCTGTCCAACGGCCAAAC‑GAT‑TACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAg > 4:350107/1‑149 (MQ=16) tCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCAcc < 4:342782/108‑1 (MQ=32) tCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCAcc > 3:342782/1‑108 (MQ=32) cAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCg > 1:53216/1‑148 (MQ=32) aCGGCCAAAC‑GAT‑TACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCa < 4:14813/136‑1 (MQ=12) aCGGCCAAAC‑GAT‑TACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCa > 3:14813/1‑136 (MQ=12) aCGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACACCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAAc > 5:112224/1‑149 (MQ=17) cGGCCAAAC‑GAT‑TACCGTTGAAGCCGGCAAAACCCAGGGCAGCGTCGACTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAAcc < 6:211477/149‑1 (MQ=16) aC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGTCCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGcc > 5:204027/1‑149 (MQ=37) c‑cAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCg < 1:288770/149‑1 (MQ=37) | GATCAACGACTCGGTCGATGCCACCACCGCGACCCTGACGGCGAGCCCGTCGGTCACCGAAGGCGGCGTGATCACCTACACCGTGATCCTGAGCAATCCTGCCCAGACGCCGGTAACCGTGACCCTGTCCAACGGCCAAAC‑CAT‑TACCGTTGAAGCCGGCAAGACCCAGGGCAGCGTCGATTTCCAGACCCCGGCGAATGACGTCTACAACAACGGTTCGACTGTCAGCGTCACCATCGAGAACGCCACAGGCGGTAATTTCGAGCAACTGACCCCGAACCCGACGCCG > NC_002947/197410‑197698 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |