| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,030,417 | G→C | 5.9% | intergenic (+417/‑277) | pcaY → / → mgtA | aromatic acid chemoreceptor/ATP‑dependent magnesium transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,030,417 | 0 | G | C | 5.9% | 245.3 / 3.2 | 80 | intergenic (+417/‑277) | pcaY/mgtA | aromatic acid chemoreceptor/ATP‑dependent magnesium transporter |
| Reads supporting (aligned to +/- strand): ref base G (38/37); new base C (3/2); total (41/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
CGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAAT > NC_002947/3030275‑3030565 | cgGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTg > 3:181617/1‑149 (MQ=255) ggTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGc > 1:62573/1‑149 (MQ=255) tgtTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCgg > 5:334852/1‑149 (MQ=255) tgtTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCgg < 6:334852/149‑1 (MQ=255) tGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCGCAACTACTTGGGGGGt > 1:331892/1‑149 (MQ=255) tGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGt > 5:262725/1‑149 (MQ=255) gCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCTGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGtt < 3:183212/140‑1 (MQ=255) gCCGGTTGGAGGCAAGCTCATGAACATCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACAACCAGCACACCCCAaatagat > 4:183212/1‑138 (MQ=255) ccGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCGCGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCt > 7:24386/1‑149 (MQ=255) cGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCGCAACTACTTGGGGGGTGCTg < 2:331892/149‑1 (MQ=255) aGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCACAAGTAGTTGCGGGGTGCTGGCGCGTc > 7:153700/1‑149 (MQ=255) aaGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTAGCTTGACCACCACCAACACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGGCt > 8:71681/1‑146 (MQ=255) aaGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCa > 2:272596/1‑149 (MQ=255) aaGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAACACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCt < 7:71681/146‑1 (MQ=255) aGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCAt < 2:228384/149‑1 (MQ=255) cTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGc < 3:298197/149‑1 (MQ=255) tCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCa > 5:64629/1‑149 (MQ=255) aTGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCGCAACAACTTGGGGGGTGc < 6:117011/130‑1 (MQ=255) aTGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCGCAACAACTTGGGGGGTGc > 5:117011/1‑130 (MQ=255) aTGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACg > 2:277064/1‑149 (MQ=255) aTGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGAGCGTCTTCATGCACg > 8:96108/1‑149 (MQ=255) ccTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGa < 3:231527/149‑1 (MQ=255) ccTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGa < 2:62573/149‑1 (MQ=255) tCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGc > 8:178410/1‑149 (MQ=255) cACTTCATTCGTTTCACATCGCCAGCCTGCGTCCCTTGCGCCGCGT‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACATTGACCACCACCAGCGACCCCCAAGTAGTTGCAGGGTGCTGGCGCGTCTTCATGCACGCATGatca > 8:334799/1‑146 (MQ=255) cTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGcccc < 6:64629/149‑1 (MQ=255) cTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGcccc < 6:262725/149‑1 (MQ=255) ttCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCggg < 6:137235/115‑1 (MQ=255) ttCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCggg > 5:137235/1‑115 (MQ=255) ttCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGccccc > 7:339297/1‑149 (MQ=255) aTTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCa > 7:89854/1‑149 (MQ=255) ttCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCGCGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCAc < 8:24386/149‑1 (MQ=255) cGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACtt > 2:188944/1‑149 (MQ=255) cacaTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCAc > 5:217483/1‑149 (MQ=255) acaTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACt < 8:89854/149‑1 (MQ=255) aTCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTg > 3:36076/1‑148 (MQ=255) gCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACt > 6:19304/1‑144 (MQ=255) gCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACt < 5:19304/144‑1 (MQ=255) gCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAAt < 1:272596/148‑1 (MQ=255) gCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCACACTTCTCACTGAAt < 3:190696/148‑1 (MQ=255) cTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACg < 8:339297/149‑1 (MQ=255) cTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACg > 2:224702/1‑149 (MQ=255) cTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCACAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACg < 8:153700/149‑1 (MQ=255) gacgccgcGGCCAGGCGCGGGCCT‑GCCGCGGCGCAAGGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACgg > 4:299399/3‑149 (MQ=37) gccgcGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATc < 6:92296/149‑1 (MQ=255) gccgcGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATc > 5:92296/1‑149 (MQ=255) ccgcGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCt < 8:318187/149‑1 (MQ=255) cgcgG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCtt > 5:287126/1‑149 (MQ=255) gcgG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCttt < 6:217483/149‑1 (MQ=255) cgG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTg < 7:178410/149‑1 (MQ=255) cccGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCg > 8:4473/1‑148 (MQ=255) ccGCGCCTGGGCGCTGCG‑TCTGCACGGCGACCTTGACCACCACCAGCACCCGCCAAGTTGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAACGATATTGAACGGTATCTTTGTACTCGaa < 7:307213/149‑1 (MQ=255) ccGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGaa > 7:259638/1‑149 (MQ=255) gCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCAt < 8:259638/148‑1 (MQ=255) ggatctcg‑TCTGCAGGGCTAGCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTTCTGGCGCGTCTTGATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGt < 5:23935/143‑1 (MQ=255) ccGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCACCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGt > 8:252322/1‑149 (MQ=255) gcg‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTaaa > 4:271605/1‑148 (MQ=255) g‑TCTGCACGGCTACCTAGACCACCAACAGCACCCCCCAACTAGTTGCGGGGTTCTGGCGCGTCATCATCCACGATTGAGCCCCCGCACTTCTAACTGAATAAAAGATATTGAAAGCATTCTTAGTACTCGAACTTTTCATGTTacatag > 6:23935/1‑144 (MQ=255) gatctctgCTACGTTGACCACCACCATCACCCCCGTAGTAGTTGCGTTGTTCTGGAGCGTCTTCATGCAGGCTTGAGCCCCCGCACTTCTCACTTAATATAAGATATTGAACGGTATCTTTGTACTCGAACTTTTAACATGAAAAGTTc < 6:58536/142‑1 (MQ=255) cACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTAACATGAAAAGTTcga < 1:188944/148‑2 (MQ=255) cGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCgg > 1:301040/1‑148 (MQ=255) ggCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAGAAGATATTGAACGGTATCTTTGTACTAGAACTTTTAACATGAAAACTTcgatatc > 5:58536/1‑144 (MQ=255) ggCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGa < 7:4473/149‑1 (MQ=255) gCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGa > 3:13964/1‑148 (MQ=255) cTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGAt > 4:263795/1‑148 (MQ=255) cTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGAt > 1:97900/1‑148 (MQ=255) tGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTcgc < 1:309316/137‑1 (MQ=255) tGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTcgc > 2:309316/1‑137 (MQ=255) gACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTAt < 3:271605/147‑1 (MQ=255) gACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCGCACTGAATAAAAGATATTGAACGGTATCTTTGAACTCGAACGTTTCATGTTAAAAGTTCGCGGGATAACTAtgt > 3:122783/1‑147 (MQ=255) accaccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACTGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCt < 1:277064/149‑1 (MQ=255) ccaccaGCACCCCCCAAGTTGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCtg > 4:350380/1‑149 (MQ=255) caccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCtgt < 2:301040/149‑1 (MQ=255) ccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTgtgt < 6:287126/149‑1 (MQ=255) ccaGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTgtgt < 4:13964/149‑1 (MQ=255) aGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGttt < 4:36076/149‑1 (MQ=255) aCCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACt > 8:304117/1‑132 (MQ=255) aCCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAACTTCGCGGGATAACt < 7:304117/132‑1 (MQ=255) cccAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGaaaa < 7:96108/149‑1 (MQ=255) aaGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAgg > 8:177398/1‑148 (MQ=255) aaGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGa < 7:177398/149‑1 (MQ=255) gtagtTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAAt > 3:60886/1‑149 (MQ=255) gtagtTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAAt > 5:11072/1‑149 (MQ=255) | CGGTGTTGGCCGGTTGGAGGCAAGCTCATGAACCTCACTTCATTCGTTTCACATCGCCAGCCTGCGTGCCTTGCGCCGCGG‑CAGGCCCGCGCCTGGCCGCGGCG‑TCTGCACGGCTACCTTGACCACCACCAGCACCCCCCAAGTAGTTGCGGGGTGCTGGCGCGTCTTCATGCACGCTTGAGCCCCCGCACTTCTCACTGAATAAAAGATATTGAACGGTATCTTTGTACTCGAACTTTTCATGTTAAAAGTTCGCGGGATAACTATTTCCCTGTGTTTATGAAAAGGAAT > NC_002947/3030275‑3030565 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |