New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2282748	21 (0.660)	5 (0.160)	5/278	3.4	18.8%	intergenic (‑140/+89)	PP_2010/PP_2011	cytochrome b561/hypothetical protein
	?	NC_002947	2282815 =	23 (0.750)					intergenic (‑207/+22)	PP_2010/PP_2011	cytochrome b561/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCAC  >  NC_002947/2282673‑2282962                                                                                                                                               |                                                                                                                                                    tACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACCGTCCAACTGCACAGGCGTGGAAGCCGGGGGAGGTGGCCGGTGGGAGCGGGCGTGCCcgcggacgg                                                                                                                                                >  1:64362/1‑143 (MQ=255)                           tctttaaaaatTGTGTTCCCCCCCCCCGGCCTCTTCGCTGCCACGCCCCCTCCCACTGTCCAACTGCACCGTCTTGCACCCCTGTGCTGTGGGAGTGTGGGCGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCg                                                                                                                      <  2:186506/142‑1 (MQ=255)                                gAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCCCAGTCTTGGCAGCCGGGGCAGTTGGACTGTGGGGGCGGGCGTGCCCGCGGAGGGGCCGGCGCGGGCGCCATCAGTTTCCGGGCAg                                                                                                                 >  5:61901/1‑148 (MQ=25)                                gAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCGGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGAAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGc                                                                                                                   <  5:30987/146‑1 (MQ=255)                                 aaaaaTGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCGTGGAAGCCTGTGCAGGTGGCCTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGCGCAGGCGCCGGCAGTTACCGGGCAg                                                                                                                 >  3:162092/1‑147 (MQ=25)                                     cggtgtGGCCAGCCACCGGCCTGTTCGCTGGCACGCCCGCCCCCAAAGTCCACCTGCACCGTCTTGGAAGCCTGGGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAgg                                                                                                            <  8:62967/146‑1 (MQ=25)                                             ccagccaCCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAAATGGACAGTGGTGGGAGCCGGTGGAGTTGGGCGGTGGGGGCGGGCGGGCCCGCGGAGGGGGCGGCGGCGGCGCCCTCCGGTACCGGGGAGCTAGGGcccggcc                                                                                                    >  8:60077/1‑143 (MQ=16)                                               cccccccggccggTTCGCTGGCACGCCCGCCCCCACAGCCCACCTCCCCTGTGTTGGACGCCTGGGCTGTTGGAGTGTGGGTGGGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGtcatc                                                                                                  <  2:64362/143‑1 (MQ=255)                                                               gCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGCAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGCGCAGGCGCCATGAGTTACCGGGCAGATAGGGCCAGTCCTCACCCACCAGCAACAcc                                                                                  >  5:67883/1‑148 (MQ=25)                                                                                 acaGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAg                                                                >  7:137181/1‑148 (MQ=255)                                                                                          cTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCg                                                       >  2:54962/1‑148 (MQ=255)                                                                                          cTGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCg                                                       >  2:136973/1‑148 (MQ=255)                                                                                           tGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCgg                                                      >  6:3524/1‑148 (MQ=255)                                                                                           tGCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGcctc                                                                       >  8:10598/1‑131 (MQ=255)                                                                                            gCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGcctcc                                                                      <  7:10598/131‑1 (MQ=255)                                                                                            gCACAGGCTTCCAAGACTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGc                                                     >  8:120309/1‑148 (MQ=255)                                                                                                       gAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCa                                          >  6:145259/1‑148 (MQ=255)                                                                                                        aaGCCTGTGAAGTTGGACTGTGGTAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCa                                          <  6:83875/147‑1 (MQ=255)                                                                                                          gCCTGTGCAGTTGGACGGTGGGAGCGGGCGGGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTc                                       <  6:29213/148‑1 (MQ=255)                                                                                                              gtgCAGTTGGAGTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTAc                                   <  6:16436/148‑1 (MQ=255)                                                                                                                    ttGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCaa                             <  3:12324/148‑1 (MQ=255)                                                                                                                        aCTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTgc                         >  4:170375/1‑148 (MQ=255)                                                                                                                                     gCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCctgct            >  2:147602/1‑148 (MQ=255)                                                                                                                                           ccGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCa      >  6:76084/1‑148 (MQ=255)                                                                                                                                             gcgAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGc    >  5:105303/1‑148 (MQ=255)                                                                                                                                               gAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGcac  <  1:147602/148‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                    TACCGGAAACAGATCTTTGCGCCAGGTCTGTGAAAAATGTGTTGCCAGCCACCGGCCTCTTCGCTGGCACGCCCGCTCCCACAGTCCAACTGCACAGTCTTGGAAGCCTGTGCAGTTGGACTGTGGGAGCGGGCGTGCCCGCGAAGGGGCCGGAGCAGGCGACATCAGTTACCGGGCAGATAGGGCCAGTCATCACCCACCAGAAACACCCGTTCTGCCTCCTGCCAGGCACCATCGGCATCAGGCACCAGTCGTACCAGCAAGTGCGCCGGTGCCTGCTGCTCCAGCAC  >  NC_002947/2282673‑2282962

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.