| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4955809 = | 47 (0.800) | 5 (0.090) | 5/266 | 7.4 | 9.6% | coding (946/1374 nt) | fliI | flagellum‑specific ATP synthase |
| ? | NC_002947 | 4955856 = | 50 (0.900) | coding (899/1374 nt) | fliI | flagellum‑specific ATP synthase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GAATGTGCTGTTGCTGATGGACTCGTTGACCCGTTTCGCCCAGGCCCAGCGGGAAATTGCCCTGGCCATCGGCGAGCCGCCAGCCACCCGGGGTTACCCGCCCTCGGTGTTCGCCAAGCTGCCCAAGCTGGTGGAGCGGGCAGGCAATGGCGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4955963‑4955809‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgaacACCGAGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGCAACAGCACATTCTTGCCTTTGTCGCGGAAGTACTCGGCAATGCGTGTGCAA > NC_002947/4955856‑4956002 GAATGTGCTGTTGCTGATGGACTCGTTGACCCGTTTCGCCCAGGCCCAGCGGGAAATTGCCCTGGCCATCGGCGAGCCGCCAGCCACCCGGGGTTACCCGCCCTCGGTGTTCGCCAAGCTGCCCAAGCTGGTGGAGCGGGCAGGCAATG < 3:211993/149‑1GAATGTGCTGTTGCTGATGGACTCGTTGACCCGTTTCGCCCAGGCCCAGCGGGAAATTGCCCTGGCCATCGGCGAGCCGCCAGCCACCCGGGGTTACCCGCCCTCGGTGTTCGCCAAGCTGCCCAAGCTGGTGGAGCGGGCAGGCAATG > 6:118422/1‑149GAATGTGCTGTTGCTGATGGACTCGTTGACCCGTTTCGCCCAGGCCCACCGGGAAATTGCCCTGGCCATCGGCGAGCCGCCAGCCACCCGGGGTTACCCGCCCTCGGTGTTCGCCAAGCTGCCCAAGCTGGTGGAGCGGGCAGGCAATG < 7:298129/149‑1 TCGGTGTTCGCCAAGCTGCCCAAGCTGGTGGAGCGGGCAGGCAATGGCGAACACCGAGGGCGGGTAAGCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGC > 3:262336/1‑148 TGTTCGCCAAGCTGCCCAAGCTGGTGGAGCGGGCAGGCAATGGCGAACACCGAGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGCAACAG > 7:66464/1‑149 GCCAAGCTGCCCAAGCTGGTGGAGCGGGCAGGCAATGGCGAACACCGAGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGCAACAGCACAT > 7:200282/1‑149 CCCAAGCTGGTGGAGCGGGCAGGCAATGGCGAACACCGAGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGCAACAGCACATTCTTGCCT < 8:66464/148‑1 CCCAAGCGGGTTGAGGGGTCAGGCATTGGCGAACACCGTGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGTGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGCAACAGCACATTCTTGCC < 4:262336/147‑1 GGCGAACACCGAGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGCAACAGCACATTCTTGCCTTTGTCGCGGAAGTACTCGGCAATGCGT < 2:97783/148‑1 CGAACACCGAGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGC < 3:143453/101‑1 CGAACACCGAGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGC > 4:143453/1‑101 GAACACCGAGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGATACGGGTCAACGAGTCCATCAGCAACAGCACATTCTTGCCTTTGTCGCGGAAGTACTCGGCAATGCGTGTG > 1:108155/1‑148 GAACACCGAGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGCAACAGCACATTCTTGCCTTTGTCGCGGAAGTACTCGGCAATGCGTGTG > 1:16919/1‑148 GAACACCGAGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGCAACAGCACATTCTTGCCTTTGTCGCGGAAGTACTCGGCAATGCGTGTG > 4:154274/1‑148 ACACCGAGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGCAACAGCACATTCTTGCCTTTGTCGCGGAAGTACTCGGCAATGCGTGTGCAA < 3:154274/149‑1 GAATGTGCTGTTGCTGATGGACTCGTTGACCCGTTTCGCCCAGGCCCAGCGGGAAATTGCCCTGGCCATCGGCGAGCCGCCAGCCACCCGGGGTTACCCGCCCTCGGTGTTCGCCAAGCTGCCCAAGCTGGTGGAGCGGGCAGGCAATGGCGAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4955963‑4955809‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgaacACCGAGGGCGGGTAACCCCGGGTGGCTGGCGGCTCGCCGATGGCCAGGGCAATTTCCCGCTGGGCCTGGGCGAAACGGGTCAACGAGTCCATCAGCAACAGCACATTCTTGCCTTTGTCGCGGAAGTACTCGGCAATGCGTGTGCAA > NC_002947/4955856‑4956002 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |