| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4647557 = | 46 (0.650) | 6 (0.120) | 6/204 | 6.8 | 15.8% | intergenic (+10/+121) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
| ? | NC_002947 | 4647665 = | 31 (0.610) | intergenic (+118/+13) | fusB/PP_4112 | elongation factor G 2/sulfate transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAA > NC_002947/4647412‑4647704 | tGAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCtgt > 2:215863/1‑149 (MQ=255) aaTGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGcc < 6:334499/149‑1 (MQ=255) aaTGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGcc > 5:415173/1‑149 (MQ=255) gCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCt‑t < 7:244909/149‑1 (MQ=255) cGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑Tcgcg < 3:124997/149‑1 (MQ=255) cGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑Tcgc < 1:215863/148‑1 (MQ=255) gCCTCCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGGTTCTCGATGGAGTTCAGCCGCTTTGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCgg < 8:20821/149‑1 (MQ=255) gCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCgg < 1:177609/149‑1 (MQ=255) gCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCgg < 1:28020/149‑1 (MQ=255) cGATGCGCTCGATGACCAACGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATCCCGAGGCCCCCGCGAGCATTGCCGATGGCATCGTCAAGAACAGCCGCGGGGAGTAAGCGCTACTCATGTTCCTGCCTCT‑TCGCGCGTAAAcc > 4:273692/1‑149 (MQ=255) cTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCt < 8:234650/149‑1 (MQ=255) gATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATTCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTAc < 1:112175/148‑1 (MQ=255) cccAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAt < 4:130105/148‑1 (MQ=255) ccAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑gg > 3:333518/1‑149 (MQ=255) gggccgggccAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCTCTCGCGGGTAAACCCGCTCCTACAGGAT‑GGcc < 1:44800/149‑1 (MQ=255) gggccAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCCggg > 4:79128/1‑148 (MQ=255) ggccAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCtgtg < 1:145844/102‑1 (MQ=255) ggccAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCtgtg > 2:145844/1‑102 (MQ=255) cAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGcc < 8:47040/139‑1 (MQ=255) cAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGcc > 7:47040/1‑139 (MQ=255) gATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATtgt < 7:118911/147‑1 (MQ=255) gATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTgc > 1:72789/1‑149 (MQ=255) tGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTgcgc < 2:72789/149‑1 (MQ=255) gTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGccccc > 7:7911/1‑149 (MQ=255) ttCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGccccc < 8:38395/148‑1 (MQ=255) aCCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTg < 8:7911/148‑1 (MQ=255) aCCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTg < 8:38321/148‑1 (MQ=255) cccGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTg > 1:421254/1‑147 (MQ=255) cctcTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAg < 3:273692/146‑1 (MQ=255) tGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCgg < 5:198900/149‑1 (MQ=255) tGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCgg < 2:289793/149‑1 (MQ=255) gAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGttt < 2:421254/149‑1 (MQ=255) ccccGGCGAGCATTGCCGATGGCTTCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTAccc < 4:333518/149‑1 (MQ=255) cccGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGtt > 7:18018/1‑143 (MQ=255) cccGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGtt < 8:18018/143‑1 (MQ=255) ccGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTTAACCCCCGCCGAAAGGGTGGGCCCCCGGCCAAACAATTGTG‑GGCCCCCAGTAGGGGCGGGGTTTccccg > 3:344179/1‑147 (MQ=255) tcttcttGACGATGCCATCGGCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCgg > 2:315100/6‑134 (MQ=38) tcttcttGACGATGCCATCGGCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCgg < 1:315100/129‑1 (MQ=38) gAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTa > 7:212057/1‑87 (MQ=255) gAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTa < 8:212057/87‑1 (MQ=255) cATTCCCGATGGCATCGTCAAGACGAGCCGCGGGTATTACGGGGTTCTCCTGTGCCGGCCTCT‑GCGCGGGTAACCCCGCTCCTACCGGTT‑GGCCGCCGGCCAAAACATTGTGCCCCCCCCTTTCGGCGCGGGTTTACCCGCGAAGAGGc < 4:344179/149‑1 (MQ=25) ccGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAgg > 1:348948/1‑94 (MQ=255) ccGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GCCCGCAgg < 2:348948/94‑1 (MQ=255) aTGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTAc > 7:182904/1‑129 (MQ=255) aTGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTAc < 8:182904/129‑1 (MQ=255) cgcgGGGAGTAAGCGTTTCTCCTGTGCCGGCCGCT‑TCGCGGTTAAACCCGCTCCTACAGTAT‑GGCCGCAGGCCAAAACATTGTGCGCCCCCCTTTAGGAGCGGGTTTACCCGCGAAGAGGCCGGTACAGACCGCAACAGTTTTCAAtgc < 6:415173/149‑1 (MQ=38) gtcTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGccccc > 3:262417/3‑72 (MQ=255) gtcTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGccccc < 4:262417/70‑1 (MQ=255) cTGTGCCGGCCTCT‑TCGCGGGTAAAACCGCACCAAAAGGAA‑GGACGCCCGCCCCAACATTGTTCGCCCCCCAGTAGGAGCGGGGTTTCCCGCGAAGAGGCCGGCCCACGCCGCAACCGGTTTGAGTGGGGGGGGCCCGCCCGCtggaa > 6:296793/1‑144 (MQ=255) | TGAAATGTTCGGCTACGCCACCTCGATGCGCTCGATGACCCAGGGCCGGGCCAGCTTCTCGATGGAGTTCACCCGCTATGCCGAGGCCCCGGCGAGCATTGCCGATGGCATCGTCAAGAAGAGCCGCGGGGAGTAAGCGGTTCTCCTGTGCCGGCCTCT‑TCGCGGGTAAACCCGCTCCTACAGGAT‑GGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAA > NC_002947/4647412‑4647704 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |