| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_002947 | 4,732,885 | G→A | A917V (GCT→GTT) | sucA ← | 2‑oxoglutarate dehydrogenase subunit E1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,732,885 | 0 | G | A | 93.5% | 314.9 / 8.7 | 107 | A917V (GCT→GTT) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
| Reads supporting (aligned to +/- strand): ref base G (3/4); new base A (49/51); total (52/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.15e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
CTTTGATCTCGATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGGTGTAAGGGG > NC_002947/4732742‑4733029 | cTTTGATCTCGATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTcg > 3:244912/1‑149 (MQ=255) tttGATCTCGATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTcgc > 2:193519/1‑149 (MQ=255) cGATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCg > 1:43378/1‑149 (MQ=255) gATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCg < 3:273579/145‑1 (MQ=255) cATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTc > 2:56155/1‑147 (MQ=255) cATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTc > 4:5192/1‑147 (MQ=255) tgtgTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAg > 3:62611/1‑149 (MQ=255) tgtTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGt < 4:227951/148‑1 (MQ=255) tgtTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTg > 6:299726/1‑149 (MQ=255) tttCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGcc > 4:269953/1‑149 (MQ=255) tttCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGc < 7:208971/148‑1 (MQ=255) ccTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACAATAGAAGTTGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGCCCAGTGCCtt > 1:345702/1‑149 (MQ=255) ttAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAGCGTCGCGAc > 8:306181/1‑121 (MQ=255) ttAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAGCGTCGCGAc < 7:306181/121‑1 (MQ=255) ttAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCttgtt > 1:197889/1‑149 (MQ=255) aaaTTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGCCCGGCGTATTCCAGGACCAGTGCCTtgttgt > 7:179378/1‑149 (MQ=255) aaTTCGGTTTCAGGTGCGCGTAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTtgtg < 7:195966/149‑1 (MQ=255) aaTTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTtgtg > 6:144697/1‑149 (MQ=255) aTTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTgg < 5:144697/149‑1 (MQ=255) ttCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTggc > 4:128607/1‑149 (MQ=255) cGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTggcg < 8:190586/148‑1 (MQ=255) cGGTTTCAGGTGCGCGAACGCGTTAGACAGGGAAGGCGGCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTggcg < 8:185188/148‑1 (MQ=255) tCAGGTGCGCGAAGGCTTTAGACAGTGAAGGCGGCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCa < 5:414339/148‑1 (MQ=255) tCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCa < 6:241644/148‑1 (MQ=255) cAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAg > 7:136966/1‑148 (MQ=255) aGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGa > 2:24730/1‑149 (MQ=255) ggTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGa < 7:116604/121‑1 (MQ=255) ggTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGa > 8:116604/1‑121 (MQ=255) ggTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGa > 3:399330/1‑148 (MQ=255) cgAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGgcg > 7:128116/1‑149 (MQ=255) aGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCAt < 7:371801/149‑1 (MQ=255) ggCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCAtg > 8:316587/1‑149 (MQ=255) cGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCAtgtg < 3:269953/149‑1 (MQ=255) gTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATgtgg > 8:214334/1‑149 (MQ=255) ttAGAGAGTTAAGGCGTCTTGCAGCAGTTTTTCCTGGTGTTCGGCGTGCTTCGATGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCGAGGAGCAGTGCCTTGTTGTGGCGGGCCAGGATACGGCTCATgtggt < 6:159593/149‑1 (MQ=255) aGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTAGTTGTGGCGGCCCAGGATACGGCGCATgtggtg < 1:56155/148‑1 (MQ=255) aGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATgtggtg < 7:263029/148‑1 (MQ=255) gACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTgct < 1:388470/149‑1 (MQ=255) gACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTgct > 4:366432/1‑149 (MQ=255) gACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTgc < 6:100544/148‑1 (MQ=255) gACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTgc > 5:100544/1‑148 (MQ=255) aGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTgctggc > 6:374607/1‑149 (MQ=255) tGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTgctggctg < 3:128607/149‑1 (MQ=255) aaGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGTCCAGGATACGGCGCATGTGGTGCTGgctgct < 3:356327/149‑1 (MQ=255) aaGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGgctgc < 8:128116/148‑1 (MQ=255) ggCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGctgctg > 2:141225/1‑148 (MQ=255) cGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTAc < 7:316587/149‑1 (MQ=255) tCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCa < 8:10911/149‑1 (MQ=255) ttGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAgg > 1:31032/1‑149 (MQ=255) gcagcaGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAgg < 4:405090/147‑1 (MQ=255) cagcagTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGgcgc > 5:125391/1‑149 (MQ=255) agcagTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGcc > 4:283819/1‑149 (MQ=255) gcagTTTTTCCTGCTGTTCGGCGTGCTTTGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGccc > 3:274271/1‑149 (MQ=255) ggaaaaactgctgTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTgg < 1:26707/142‑1 (MQ=255) gTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTgg > 8:211107/1‑149 (MQ=255) gTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTgg < 2:248746/149‑1 (MQ=255) gTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTgg < 8:136966/149‑1 (MQ=255) gTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTgg < 4:244912/149‑1 (MQ=255) tttttCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTAcc > 3:232889/1‑137 (MQ=255) tttttCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTAcc < 4:232889/137‑1 (MQ=255) tCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACTAGGCGCCCTGGTTCa < 4:62611/148‑1 (MQ=255) ccTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCGTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATc > 8:28254/1‑149 (MQ=255) ccTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGctgctg < 6:106186/128‑1 (MQ=255) ccTGCTGTTCGGCGTCCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGctgctg > 5:106186/1‑128 (MQ=255) ctgctgTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATc < 5:299726/148‑1 (MQ=255) gctgTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGc > 2:4491/1‑149 (MQ=255) gctgTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCAGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGccc < 1:322458/137‑1 (MQ=255) gctgTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCAGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGccc > 2:322458/1‑137 (MQ=255) ctgTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCgg < 2:43378/147‑1 (MQ=255) ggCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCt < 1:4491/149‑1 (MQ=255) gTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGa > 6:201949/1‑148 (MQ=255) cTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGacac < 8:7588/148‑1 (MQ=255) cTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGacac > 1:402877/1‑148 (MQ=255) cTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGacac < 3:283819/148‑1 (MQ=255) aaGCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGAcc > 3:141073/1‑149 (MQ=255) gCGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCg > 2:25797/1‑148 (MQ=255) cGTAACCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTACATCGGCTCTTCCTGACACCAGACCGCa < 1:24730/149‑1 (MQ=255) aCCACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCt < 5:74518/149‑1 (MQ=255) ccACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTAc < 6:280916/102‑1 (MQ=255) ccACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTAc > 5:280916/1‑102 (MQ=255) ccACAG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCtt < 7:214334/149‑1 (MQ=255) cacaG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTg > 7:212454/1‑149 (MQ=255) cacaG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCACACCGCATGCtt > 2:298526/1‑148 (MQ=255) cacaG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTCTGGCGGCCCAGGACACGGCGCATGTGGTGCTGGATGATGTACCAGGCCCCCTGGTTCATCGCCTCTTCCTGACCCCAGCCCGCATGcat > 4:99846/1‑146 (MQ=255) acaG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGa < 5:374607/149‑1 (MQ=255) caG‑GCTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAATGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAg > 1:93754/1‑149 (MQ=255) cTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑Tg < 7:211107/149‑1 (MQ=255) cTGGCGCGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑Tg < 1:25797/149‑1 (MQ=255) gcgcGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTc > 7:393225/1‑118 (MQ=255) gcgcGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTc < 8:393225/118‑1 (MQ=255) gcgcGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑Tgg < 3:366432/147‑1 (MQ=255) gcgcGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGgtg < 4:141073/149‑1 (MQ=255) gcgcGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGgt < 3:5192/148‑1 (MQ=255) gcgcGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGgt < 4:399330/148‑1 (MQ=255) gcgcGGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGgt < 8:212454/148‑1 (MQ=255) gcgGCAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTTCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCA‑ACCTCAAGCATGCGGTCTGgtgtc < 1:141225/149‑2 (MQ=255) cAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGGTGTAAggg < 1:193519/149‑1 (MQ=255) cAGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGGTGTAAggg > 4:173700/1‑149 (MQ=255) aGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGTCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTTACACCA‑ACCTCAAGCATGCGGTCTGGTGTCAggaa < 2:197889/149‑3 (MQ=37) aGAAACGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGGTGTAAgggg > 2:114787/1‑149 (MQ=255) | CTTTGATCTCGATAGCCATTATCTGTGTTTCCTTAAATTCGGTTTCAGGTGCGCGAAGGCGTTAGACAGTGAAGGCGTCTTGCAGCAGTTTTTCCTGCTGTTCGGCGTGCTTCGAAGCGTAACCACAG‑GCTGGCGCGGCAGAAGCGTCGCGACCGGCGTATTCCAGGACCAGTGCCTTGTTGTGGCGGCCCAGGATACGGCGCATGTGGTGCTGGCTGCTGTACCAGGCGCCCTGGTTCATCGGCTCTTCCTGACACCAGACCGCATGCTTGAGGT‑TGGTGTAAGGGG > NC_002947/4732742‑4733029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |